Free for academic non-profit institutions. Other users need a Commercial license

Aliases for MELTF-AS1 Gene

Subcategory (RNA class) for MELTF-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for MELTF-AS1 Gene

  • MELTF Antisense RNA 1 2 3 5
  • MFI2 Antisense RNA 1 (Non-Protein Coding) 2 3
  • MFI2-AS1 3

External Ids for MELTF-AS1 Gene

Previous HGNC Symbols for MELTF-AS1 Gene

  • MFI2-AS1

Summaries for MELTF-AS1 Gene

GeneCards Summary for MELTF-AS1 Gene

MELTF-AS1 (MELTF Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for MELTF-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MELTF-AS1 Gene

Genomics for MELTF-AS1 Gene

Regulatory Elements for MELTF-AS1 Gene

Enhancers for MELTF-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03H197553 1.2 ENCODE dbSUPER 20.4 +555.7 555676 2 HDGF PKNOX1 SIN3A ZNF2 ZBTB7B BRCA1 GLIS2 ZNF143 RUNX3 DEK MELTF-AS1 BDH1 ENSG00000249626 SENP5 LOC220729 GC03P197515
GH03H196650 1.7 FANTOM5 Ensembl ENCODE dbSUPER 9.9 -348.0 -348045 2 HDAC1 TBP RAD21 TCF12 ZNF766 GATA2 EGR1 SCRT2 SIRT6 RCOR1 CEP19 MELTF-AS1 NRROS PIGX GC03M196709
GH03H197028 1.4 FANTOM5 ENCODE 11.6 +30.9 30916 4 HDGF FOXA2 PKNOX1 ARNT SIN3A YY1 ZNF766 ZNF143 FOS DEK ENSG00000234742 ENSG00000230732 MELTF-AS1 LOC220729 UBXN7 RNF168 DLG1 MELTF SENP5 NRROS
GH03H196527 1.6 FANTOM5 ENCODE dbSUPER 9.3 -470.9 -470917 1 PKNOX1 ATF1 ARNT SIN3A YY1 TCF12 GTF3C2 ZNF766 GATA2 ZNF143 FBXO45 RNF168 SDHAP1 SDHAP2 LINC00969 ENSG00000230732 WDR53 MUC20P1 UBXN7 CEP19
GH03H197351 1.4 Ensembl ENCODE dbSUPER 9.6 +354.3 354272 4 HDGF PKNOX1 FOXA2 SIN3A RCOR1 RUNX3 SMARCA5 HMG20B SREBF1 ZNF217 MELTF-AS1 PAK2 LOC101926923 GC03M197355
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MELTF-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for MELTF-AS1 Gene

Chromosome:
3
Start:
196,999,460 bp from pter
End:
197,004,744 bp from pter
Size:
5,285 bases
Orientation:
Plus strand

Genomic View for MELTF-AS1 Gene

Genes around MELTF-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MELTF-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MELTF-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MELTF-AS1 Gene

Proteins for MELTF-AS1 Gene

Post-translational modifications for MELTF-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MELTF-AS1 Gene

Domains & Families for MELTF-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MELTF-AS1 Gene

Function for MELTF-AS1 Gene

Phenotypes From GWAS Catalog for MELTF-AS1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for MELTF-AS1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MELTF-AS1 Gene

Localization for MELTF-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MELTF-AS1 Gene

Pathways & Interactions for MELTF-AS1 Gene

SuperPathways for MELTF-AS1 Gene

No Data Available

Interacting Proteins for MELTF-AS1 Gene

Gene Ontology (GO) - Biological Process for MELTF-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MELTF-AS1 Gene

Drugs & Compounds for MELTF-AS1 Gene

No Compound Related Data Available

Transcripts for MELTF-AS1 Gene

mRNA/cDNA for MELTF-AS1 Gene

(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for MELTF-AS1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for MELTF-AS1 Gene

No ASD Table

Relevant External Links for MELTF-AS1 Gene

GeneLoc Exon Structure for
MELTF-AS1
ECgene alternative splicing isoforms for
MELTF-AS1

Expression for MELTF-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MELTF-AS1 Gene

Orthologs for MELTF-AS1 Gene

Evolution for MELTF-AS1 Gene

ENSEMBL:
Gene Tree for MELTF-AS1 (if available)
TreeFam:
Gene Tree for MELTF-AS1 (if available)

No data available for Orthologs for MELTF-AS1 Gene

Paralogs for MELTF-AS1 Gene

No data available for Paralogs for MELTF-AS1 Gene

Variants for MELTF-AS1 Gene

Sequence variations from dbSNP and Humsavar for MELTF-AS1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs1000382853 -- 197,003,934(+) CCCTT(C/G)CAGCG nc-transcript-variant, reference, missense
rs1001329235 -- 197,001,887(+) GCAGG(C/T)CACAC upstream-variant-2KB, utr-variant-3-prime
rs1001824143 -- 197,004,692(+) AAGTA(G/T)TATGA intron-variant, nc-transcript-variant, downstream-variant-500B
rs1002085930 -- 197,004,980(+) GAGGG(C/G)TTCTG intron-variant, downstream-variant-500B, reference, missense
rs1002251285 -- 197,002,844(+) CCCGC(A/G)GGCGA upstream-variant-2KB, utr-variant-3-prime

Structural Variations from Database of Genomic Variants (DGV) for MELTF-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv8855n54 CNV gain 21841781
dgv8856n54 CNV gain+loss 21841781
dgv8857n54 CNV loss 21841781
esv2763775 CNV gain+loss 21179565
esv29143 CNV loss 19812545
esv3599293 CNV gain 21293372
nsv1003135 CNV gain 25217958
nsv1073277 CNV deletion 25765185
nsv1144060 CNV deletion 24896259
nsv517987 CNV loss 19592680
nsv593106 CNV loss 21841781
nsv822421 CNV loss 20364138

Relevant External Links for MELTF-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MELTF-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MELTF-AS1 Gene

Disorders for MELTF-AS1 Gene

Relevant External Links for MELTF-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MELTF-AS1
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MELTF-AS1

No disorders were found for MELTF-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MELTF-AS1 Gene

Publications for MELTF-AS1 Gene

  1. Overexpression of long non-coding RNA MFI2 promotes cell proliferation and suppresses apoptosis in human osteosarcoma. (PMID: 27513470) Yin Z … Li M (Oncology reports 2016) 2 3 60
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60

Products for MELTF-AS1 Gene

Sources for MELTF-AS1 Gene

Content
Loading form....