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Aliases for MELTF-AS1 Gene

Subcategory (RNA class) for MELTF-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for MELTF-AS1 Gene

  • MELTF Antisense RNA 1 2 3 5
  • MFI2 Antisense RNA 1 (Non-Protein Coding) 2 3
  • MFI2-AS1 3

External Ids for MELTF-AS1 Gene

Previous HGNC Symbols for MELTF-AS1 Gene

  • MFI2-AS1

Summaries for MELTF-AS1 Gene

GeneCards Summary for MELTF-AS1 Gene

MELTF-AS1 (MELTF Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MELTF-AS1 Gene

Genomics for MELTF-AS1 Gene

Regulatory Elements for MELTF-AS1 Gene

Enhancers for MELTF-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F196687 1.1 Ensembl ENCODE 19.9 -307.9 -307860 8.0 CTCF KLF1 MAX CDC5L CEBPG RAD21 ZFHX2 ZNF316 ZNF366 EGR1 CEP19 MELTF-AS1 PIGX LINC01063 NCBP2 RNU6-42P LOC220729 TM4SF19 RNU6-910P GC03M196709
GH03F197553 1 ENCODE 20.4 +555.7 555676 2.5 HDGF PKNOX1 SIN3A BRCA1 ZNF2 GLIS2 ZNF143 PAF1 ZNF263 SP3 MELTF-AS1 BDH1 ENSG00000249626 SENP5 LOC220729 GC03P197515
GH03F197028 1.4 FANTOM5 ENCODE 11.6 +30.9 30916 4.0 HDGF PKNOX1 ARNT SIN3A CBX5 ZNF143 FOS DEK ZNF263 SP3 ENSG00000234742 RNF168 ENSG00000230732 UBXN7 WDR53 MELTF-AS1 LOC220729 ENSG00000228028 DLG1 MELTF
GH03F196968 1.4 FANTOM5 ENCODE 11.3 -30.1 -30068 2.4 PKNOX1 CREB3L1 SIN3A ZNF48 GLIS2 ZNF143 KLF13 ZNF263 REST SMARCB1 LOC220729 UBXN7-AS1 ENSG00000249626 MELTF-AS1 PIGZ SENP5 NCBP2-AS2 NRROS GC03P196980
GH03F196650 1.5 FANTOM5 Ensembl ENCODE 9.9 -348.0 -348045 2.8 GATA2 FOS DEK ZNF263 JUNB CREB3 MEF2D SMARCA4 MYNN STAT3 CEP19 MELTF-AS1 NRROS PIGX GC03M196709
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MELTF-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for MELTF-AS1 Gene

Chromosome:
3
Start:
196,999,460 bp from pter
End:
197,004,744 bp from pter
Size:
5,285 bases
Orientation:
Plus strand

Genomic View for MELTF-AS1 Gene

Genes around MELTF-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MELTF-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MELTF-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MELTF-AS1 Gene

Proteins for MELTF-AS1 Gene

Post-translational modifications for MELTF-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MELTF-AS1 Gene

Domains & Families for MELTF-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MELTF-AS1 Gene

Function for MELTF-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MELTF-AS1 Gene

Localization for MELTF-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MELTF-AS1 Gene

Pathways & Interactions for MELTF-AS1 Gene

SuperPathways for MELTF-AS1 Gene

No Data Available

Interacting Proteins for MELTF-AS1 Gene

Gene Ontology (GO) - Biological Process for MELTF-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MELTF-AS1 Gene

Transcripts for MELTF-AS1 Gene

mRNA/cDNA for MELTF-AS1 Gene

(2) Additional mRNA sequences :
(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MELTF-AS1 Gene

MFI2 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MELTF-AS1 Gene

No ASD Table

Relevant External Links for MELTF-AS1 Gene

GeneLoc Exon Structure for
MELTF-AS1
ECgene alternative splicing isoforms for
MELTF-AS1

Expression for MELTF-AS1 Gene

SOURCE GeneReport for Unigene cluster for MELTF-AS1 Gene:

Hs.666451
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MELTF-AS1 Gene

Orthologs for MELTF-AS1 Gene

Evolution for MELTF-AS1 Gene

ENSEMBL:
Gene Tree for MELTF-AS1 (if available)
TreeFam:
Gene Tree for MELTF-AS1 (if available)

No data available for Orthologs for MELTF-AS1 Gene

Paralogs for MELTF-AS1 Gene

No data available for Paralogs for MELTF-AS1 Gene

Variants for MELTF-AS1 Gene

Sequence variations from dbSNP and Humsavar for MELTF-AS1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs1060357 -- 197,001,762(-) CATGC(A/C)GAGGC upstream-variant-2KB, utr-variant-3-prime
rs113327579 -- 197,002,606(+) GGGGG(C/T)GGCTG upstream-variant-2KB, utr-variant-3-prime
rs113608979 -- 197,001,247(+) GTGAA(A/G)CCATG downstream-variant-500B, upstream-variant-2KB
rs113697092 -- 197,004,859(+) CTGTC(A/G)GCCTT intron-variant, downstream-variant-500B, utr-variant-3-prime
rs113908132 -- 197,003,823(+) GCAGC(A/G)CCCCC intron-variant, nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for MELTF-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv8855n54 CNV gain 21841781
dgv8856n54 CNV gain+loss 21841781
dgv8857n54 CNV loss 21841781
esv2763775 CNV gain+loss 21179565
esv29143 CNV loss 19812545
esv3599293 CNV gain 21293372
nsv1003135 CNV gain 25217958
nsv1073277 CNV deletion 25765185
nsv1144060 CNV deletion 24896259
nsv517987 CNV loss 19592680
nsv593106 CNV loss 21841781
nsv822421 CNV loss 20364138

Relevant External Links for MELTF-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MELTF-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MELTF-AS1 Gene

Disorders for MELTF-AS1 Gene

Relevant External Links for MELTF-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MELTF-AS1
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MELTF-AS1

No disorders were found for MELTF-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MELTF-AS1 Gene

Publications for MELTF-AS1 Gene

  1. Overexpression of long non-coding RNA MFI2 promotes cell proliferation and suppresses apoptosis in human osteosarcoma. (PMID: 27513470) Yin Z. … Li M. (Oncol. Rep. 2016) 2 3 64
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for MELTF-AS1 Gene

Sources for MELTF-AS1 Gene

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