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Aliases for MEIS3P1 Gene

Aliases for MEIS3P1 Gene

  • Meis Homeobox 3 Pseudogene 1 2 3 5
  • Meis1, Myeloid Ecotropic Viral Integration Site 1 Homolog 3 (Mouse) 2
  • Meis1, Myeloid Ecotropic Viral Integration Site 1 Homolog 4 (Mouse) 2
  • Meis1, Myeloid Ecotropic Viral Integration Site 1 Homolog 3 3
  • Meis1, Myeloid Ecotropic Viral Integration Site 1 Homolog 4 3
  • Putative Homeobox Protein Meis3-Like 1 3
  • Meis1 Homolog 3 (Mouse) Pseudogene 1 2
  • Meis1 Homolog 3 Pseudogene 1 3
  • Meis Homolog 3 3
  • CTD-3157E16.2 3
  • MEIS3 3
  • MEIS4 3
  • MRG2 3

External Ids for MEIS3P1 Gene

Previous HGNC Symbols for MEIS3P1 Gene

  • MEIS3
  • MEIS4

Previous GeneCards Identifiers for MEIS3P1 Gene

  • GC17P015632
  • GC17P015689
  • GC17P015691
  • GC17P015694

Summaries for MEIS3P1 Gene

Entrez Gene Summary for MEIS3P1 Gene

  • This gene appears to be a retrotransposed pseudogene based on its lack of exons compared to other family members, one of which is found on chromosome 19 (MEIS3). It does appear to be transcribed and has an ORF that may encode a protein of similar size and sequence to that encoded by MEIS3. [provided by RefSeq, Jul 2008]

GeneCards Summary for MEIS3P1 Gene

MEIS3P1 (Meis Homeobox 3 Pseudogene 1) is a Pseudogene.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MEIS3P1 Gene

Genomics for MEIS3P1 Gene

Regulatory Elements for MEIS3P1 Gene

Enhancers for MEIS3P1 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around MEIS3P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for MEIS3P1 Gene

Chromosome:
17
Start:
15,786,618 bp from pter
End:
15,789,705 bp from pter
Size:
3,088 bases
Orientation:
Plus strand

Genomic View for MEIS3P1 Gene

Genes around MEIS3P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MEIS3P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MEIS3P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MEIS3P1 Gene

Proteins for MEIS3P1 Gene

  • Protein details for MEIS3P1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A6NDR6-ME3L1_HUMAN
    Recommended name:
    Putative homeobox protein Meis3-like 1
    Protein Accession:
    A6NDR6

    Protein attributes for MEIS3P1 Gene

    Size:
    274 amino acids
    Molecular mass:
    30204 Da
    Quaternary structure:
    No Data Available

neXtProt entry for MEIS3P1 Gene

Proteomics data for MEIS3P1 Gene at MOPED

Post-translational modifications for MEIS3P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MEIS3P1 Gene

Domains & Families for MEIS3P1 Gene

Gene Families for MEIS3P1 Gene

Protein Domains for MEIS3P1 Gene

Suggested Antigen Peptide Sequences for MEIS3P1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

A6NDR6

UniProtKB/Swiss-Prot:

ME3L1_HUMAN :
  • Contains 1 homeobox DNA-binding domain.
  • Belongs to the TALE/MEIS homeobox family.
Domain:
  • Contains 1 homeobox DNA-binding domain.
Family:
  • Belongs to the TALE/MEIS homeobox family.
genes like me logo Genes that share domains with MEIS3P1: view

Function for MEIS3P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for MEIS3P1 Gene

Localization for MEIS3P1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for MEIS3P1 Gene

No data available for Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MEIS3P1 Gene

Pathways & Interactions for MEIS3P1 Gene

SuperPathways for MEIS3P1 Gene

No Data Available

Interacting Proteins for MEIS3P1 Gene

Gene Ontology (GO) - Biological Process for MEIS3P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MEIS3P1 Gene

Drugs & Compounds for MEIS3P1 Gene

No Compound Related Data Available

Transcripts for MEIS3P1 Gene

mRNA/cDNA for MEIS3P1 Gene

(3) Additional mRNA sequences :
(47) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MEIS3P1 Gene

Meis homeobox 3 pseudogene 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MEIS3P1 Gene

No ASD Table

Relevant External Links for MEIS3P1 Gene

GeneLoc Exon Structure for
MEIS3P1
ECgene alternative splicing isoforms for
MEIS3P1

Expression for MEIS3P1 Gene

mRNA expression in normal human tissues for MEIS3P1 Gene

SOURCE GeneReport for Unigene cluster for MEIS3P1 Gene Hs.356135

genes like me logo Genes that share expression patterns with MEIS3P1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for MEIS3P1 Gene

Orthologs for MEIS3P1 Gene

Evolution for MEIS3P1 Gene

ENSEMBL:
Gene Tree for MEIS3P1 (if available)
TreeFam:
Gene Tree for MEIS3P1 (if available)

No data available for Orthologs for MEIS3P1 Gene

Paralogs for MEIS3P1 Gene

(11) SIMAP similar genes for MEIS3P1 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with MEIS3P1: view

No data available for Paralogs for MEIS3P1 Gene

Variants for MEIS3P1 Gene

Sequence variations from dbSNP and Humsavar for MEIS3P1 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
rs10780 -- 15,788,068(+) GATTC(C/T)TTCAC nc-transcript-variant
rs11218 -- 15,788,009(+) GGGAC(A/G)GGGTG nc-transcript-variant
rs11766 -- 15,788,074(+) TTCAC(C/T)CTCCT nc-transcript-variant
rs12607 -- 15,787,992(-) GTCCT(C/G)GCGGC nc-transcript-variant
rs13410 -- 15,787,909(+) GCCCC(A/G)CTTCT nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for MEIS3P1 Gene

Variant ID Type Subtype PubMed ID
nsv907705 CNV Gain 21882294
esv2715702 CNV Deletion 23290073
nsv442411 CNV CNV 18776908

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for MEIS3P1 Gene

Disorders for MEIS3P1 Gene

Relevant External Links for MEIS3P1

Genetic Association Database (GAD)
MEIS3P1
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MEIS3P1

No disorders were found for MEIS3P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MEIS3P1 Gene

Publications for MEIS3P1 Gene

  1. DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage. (PMID: 16625196) Zody M.C. … Nusbaum C. (Nature 2006) 3 4 67
  2. Identification of a conserved family of Meis1-related homeobox genes. (PMID: 9049632) Steelman S. … Buchberg A.M. (Genome Res. 1997) 2 3
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  4. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo M.F. … Soares M.B. (Genome Res. 1996) 3

Products for MEIS3P1 Gene

Sources for MEIS3P1 Gene

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