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Aliases for MEF2C-AS1 Gene

Subcategory (RNA class) for MEF2C-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for MEF2C-AS1 Gene

  • MEF2C Antisense RNA 1 2 3 5

External Ids for MEF2C-AS1 Gene

Previous GeneCards Identifiers for MEF2C-AS1 Gene

  • GC05P088189
  • GC05P088192

Summaries for MEF2C-AS1 Gene

GeneCards Summary for MEF2C-AS1 Gene

MEF2C-AS1 (MEF2C Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MEF2C-AS1 Gene

Genomics for MEF2C-AS1 Gene

Regulatory Elements for MEF2C-AS1 Gene

Promoters for MEF2C-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around MEF2C-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for MEF2C-AS1 Gene

Chromosome:
5
Start:
88,883,328 bp from pter
End:
89,466,398 bp from pter
Size:
583,071 bases
Orientation:
Plus strand

Genomic View for MEF2C-AS1 Gene

Genes around MEF2C-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MEF2C-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MEF2C-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MEF2C-AS1 Gene

Proteins for MEF2C-AS1 Gene

Post-translational modifications for MEF2C-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MEF2C-AS1 Gene

Domains & Families for MEF2C-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MEF2C-AS1 Gene

Function for MEF2C-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MEF2C-AS1 Gene

Localization for MEF2C-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MEF2C-AS1 Gene

Pathways & Interactions for MEF2C-AS1 Gene

SuperPathways for MEF2C-AS1 Gene

No Data Available

Interacting Proteins for MEF2C-AS1 Gene

Gene Ontology (GO) - Biological Process for MEF2C-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MEF2C-AS1 Gene

Drugs & Compounds for MEF2C-AS1 Gene

No Compound Related Data Available

Transcripts for MEF2C-AS1 Gene

mRNA/cDNA for MEF2C-AS1 Gene

(14) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MEF2C-AS1 Gene

No ASD Table

Relevant External Links for MEF2C-AS1 Gene

GeneLoc Exon Structure for
MEF2C-AS1
ECgene alternative splicing isoforms for
MEF2C-AS1

Expression for MEF2C-AS1 Gene

mRNA expression in normal human tissues for MEF2C-AS1 Gene

genes like me logo Genes that share expression patterns with MEF2C-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for MEF2C-AS1 Gene

Orthologs for MEF2C-AS1 Gene

Evolution for MEF2C-AS1 Gene

ENSEMBL:
Gene Tree for MEF2C-AS1 (if available)
TreeFam:
Gene Tree for MEF2C-AS1 (if available)

No data available for Orthologs for MEF2C-AS1 Gene

Paralogs for MEF2C-AS1 Gene

No data available for Paralogs for MEF2C-AS1 Gene

Variants for MEF2C-AS1 Gene

Sequence variations from dbSNP and Humsavar for MEF2C-AS1 Gene

SNP ID Clin Chr 05 pos Sequence Context AA Info Type
rs170023 -- 88,907,783(-) ACTTT(A/T)AAAAA intron-variant
rs214131 -- 88,973,952(-) CTATA(A/G)GATAT intron-variant
rs214132 -- 88,966,402(-) TTCCA(C/T)TTTCA intron-variant, nc-transcript-variant
rs214136 -- 88,956,656(+) GCTCC(A/G)TGGAA intron-variant
rs214137 -- 88,955,319(-) AAATG(C/T)TTCTC intron-variant

Relevant External Links for MEF2C-AS1 Gene

HapMap Linkage Disequilibrium report
MEF2C-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MEF2C-AS1 Gene

Disorders for MEF2C-AS1 Gene

Relevant External Links for MEF2C-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MEF2C-AS1

No disorders were found for MEF2C-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MEF2C-AS1 Gene

Publications for MEF2C-AS1 Gene

  1. Analysis of long non-coding RNA expression profiles in gastric cancer. (PMID: 23801869) Cao W.J. … Zhang Z.Y. (World J. Gastroenterol. 2013) 2 3 67
  2. Multistage genome-wide association meta-analyses identified two new loci for bone mineral density. (PMID: 24249740) Zhang L. … Deng H.W. (Hum. Mol. Genet. 2014) 3
  3. Meta-analysis of 74,046 individuals identifies 11 new susceptibility loci for Alzheimer's disease. (PMID: 24162737) Lambert J.C. … Amouyel P. (Nat. Genet. 2013) 3
  4. Genome-wide association analyses suggest NELL1 influences adverse metabolic response to HCTZ in African Americans. (PMID: 23400010) Del-Aguila J.L. … Boerwinkle E. (Pharmacogenomics J. 2013) 3
  5. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3

Products for MEF2C-AS1 Gene

Sources for MEF2C-AS1 Gene

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