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Aliases for MED15P9 Gene

Aliases for MED15P9 Gene

  • Mediator Complex Subunit 15 Pseudogene 9 2 3 5
  • CCDC74B Antisense RNA 1 (Non-Protein Coding) 2 3
  • Mediator Complex Subunit 15 Pseudogene 2 2 3
  • CCDC74B Antisense RNA 1 2
  • CCDC74B-AS1 3
  • MED15P2 3

External Ids for MED15P9 Gene

Previous HGNC Symbols for MED15P9 Gene

  • CCDC74B-AS1
  • MED15P2

Previous GeneCards Identifiers for MED15P9 Gene

  • GC02P130890

Summaries for MED15P9 Gene

GeneCards Summary for MED15P9 Gene

MED15P9 (Mediator Complex Subunit 15 Pseudogene 9) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MED15P9 Gene

Genomics for MED15P9 Gene

Regulatory Elements for MED15P9 Gene


Promoters for MED15P9 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001827141 79 2600 TBP SAP130 NFYC ARID4B MNT THRB POLR2A IKZF1 ZNF512

Genomic Location for MED15P9 Gene

Chromosome:
2
Start:
130,129,621 bp from pter
End:
130,139,417 bp from pter
Size:
9,797 bases
Orientation:
Plus strand

Genomic View for MED15P9 Gene

Genes around MED15P9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MED15P9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MED15P9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MED15P9 Gene

Proteins for MED15P9 Gene

Post-translational modifications for MED15P9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MED15P9 Gene

Domains & Families for MED15P9 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MED15P9 Gene

Function for MED15P9 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MED15P9 Gene

Localization for MED15P9 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MED15P9 Gene

Pathways & Interactions for MED15P9 Gene

SuperPathways for MED15P9 Gene

No Data Available

Interacting Proteins for MED15P9 Gene

Gene Ontology (GO) - Biological Process for MED15P9 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MED15P9 Gene

Transcripts for MED15P9 Gene

mRNA/cDNA for MED15P9 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MED15P9 Gene

No ASD Table

Relevant External Links for MED15P9 Gene

GeneLoc Exon Structure for
MED15P9
ECgene alternative splicing isoforms for
MED15P9

Expression for MED15P9 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MED15P9 Gene

mRNA differential expression in normal tissues according to GTEx for MED15P9 Gene

This gene is overexpressed in Testis (x25.1) and Pituitary (x5.7).

NURSA nuclear receptor signaling pathways regulating expression of MED15P9 Gene:

MED15P9
genes like me logo Genes that share expression patterns with MED15P9: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MED15P9 Gene

Orthologs for MED15P9 Gene

Evolution for MED15P9 Gene

ENSEMBL:
Gene Tree for MED15P9 (if available)
TreeFam:
Gene Tree for MED15P9 (if available)

No data available for Orthologs for MED15P9 Gene

Paralogs for MED15P9 Gene

No data available for Paralogs for MED15P9 Gene

Variants for MED15P9 Gene

Sequence variations from dbSNP and Humsavar for MED15P9 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs10204203 -- 130,134,472(+) ttata(G/T)tcaag intron-variant
rs1020551 -- 130,128,369(-) CGGGT(A/G)ACTCT intron-variant, upstream-variant-2KB
rs1046687 -- 130,139,506(-) GGAGA(C/T)TGGCT nc-transcript-variant, downstream-variant-500B, utr-variant-3-prime
rs10928955 -- 130,135,052(+) ATAAC(A/T)CActc intron-variant
rs10928956 -- 130,135,054(+) AActc(A/T)ctctc intron-variant

Structural Variations from Database of Genomic Variants (DGV) for MED15P9 Gene

Variant ID Type Subtype PubMed ID
dgv2032n106 OTHER inversion 24896259
dgv4072n100 CNV loss 25217958
dgv4073n100 CNV gain 25217958
esv2751826 CNV gain 17911159
esv2759092 CNV gain+loss 17122850
esv2760631 CNV gain+loss 21179565
esv2763387 CNV loss 21179565
esv3584065 CNV loss 25503493
esv3584069 CNV loss 25503493
esv3893326 CNV gain 25118596
nsv1001337 CNV loss 25217958
nsv1004301 CNV loss 25217958
nsv1008911 CNV gain 25217958
nsv1011360 CNV loss 25217958
nsv428403 CNV loss 18775914
nsv459274 CNV loss 19166990
nsv520559 CNV gain+loss 19592680
nsv583046 CNV loss 21841781
nsv583113 CNV gain 21841781
nsv7327 OTHER inversion 18451855
nsv821629 CNV loss 15273396
nsv834375 CNV loss 17160897
nsv953161 CNV deletion 24416366
nsv953162 CNV deletion 24416366
nsv961882 CNV duplication 23825009
nsv998333 CNV gain+loss 25217958

Relevant External Links for MED15P9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MED15P9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MED15P9 Gene

Disorders for MED15P9 Gene

Relevant External Links for MED15P9

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MED15P9

No disorders were found for MED15P9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MED15P9 Gene

Publications for MED15P9 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for MED15P9 Gene

Sources for MED15P9 Gene

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