MDM2 Gene
protein-coding GIFtS : 74
GCID: GC12 P069201
Mdm2, p53 E3 ubiquitin protein ligase homolog (mouse) (Previous names: mouse double minute 2, human homolog of; p53-binding protein,... )
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Aliasesfor MDM2 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Mdm2, P53 E3 Ubiquitin Protein Ligase Homolog (Mouse) 1 2 HDM2 Transcript Variant MYO-202 HDMX1 2 HDM2 Transcript Variant MYO-242 Oncoprotein Mdm22 3 HDM2 Transcript Variant MYO-252 HDM21 HDM2 Transcript Variant MYO-262 MGC53701 HDM2 Transcript Variant MYO-322 Mdm2 P53 Binding Protein Homolog (Mouse)1 HDM2 Transcript Variant MYO-42 Mdm2, Transformed 3T3 Cell Double Minute 2, P53 Binding Protein (Mouse)1 MDM2 Variant FB282 Mouse Double Minute 2, Human Homolog Of; P53-Binding Protein1 MDM2 Variant FB302 ACTFS2 Mdm2, Transformed 3T3 Cell Double Minute 2, P53 Binding Protein2 Double Minute 2, Human Homolog Of; P53-Binding Protein2 EC 6.3.2.-3 E3 Ubiquitin-Protein Ligase Mdm22 Hdm23 Hdm23 Double Minute 2 Protein3 HDM2 Transcript Variant MYO-12 P53-Binding Protein Mdm23 HDM2 Transcript Variant MYO-182 EC 6.3.28
Export aliases for MDM2 gene to outside databases Previous GC identifers: GC12M068977 GC12P069030 GC12P068918 GC12P067488 GC12P066253
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Summariesfor MDM2 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for MDM2 : This gene is a target gene of the transcription factor tumor protein p53. The encoded protein is a nuclear phosphoprotein that binds and inhibits transactivation by tumor protein p53, as part of an autoregulatory negative feedback loop. Overexpression of this gene can result in excessive inactivation of tumor protein p53, diminishing its tumor suppressor function. This protein has E3 ubiquitin ligase activity, which targets tumor protein p53 for proteasomal degradation. This protein also affects the cell cycle, apoptosis, and tumorigenesis through interactions with other proteins, including retinoblastoma 1 and ribosomal protein L5. More than 40 different alternatively spliced transcript variants have been isolated from both tumor and normal tissues. (provided by RefSeq, Jul 2008) UniProtKB/Swiss-Prot: MDM2_HUMAN, Q00987 Function : E3 ubiquitin-protein ligase that mediates ubiquitination of p53/TP53, leading to its degradation by theproteasome. Inhibits p53/TP53- and p73/TP73-mediated cell cycle arrest and apoptosis by binding its transcriptional activation domain. Also acts as an ubiquitin ligase E3 toward itself and ARRB1. Permits the nuclear export of p53/TP53. Promotes proteasome-dependent ubiquitin-independent degradation of retinoblastoma RB1 protein. Inhibits DAXX-mediated apoptosis by inducing its ubiquitination and degradation. Component of the TRIM28/KAP1-MDM2-p53/TP53 complex involved in stabilizing p53/TP53. Also component of the TRIM28/KAP1-ERBB4-MDM2 complex which links growth factor and DNA damage response pathways. Mediates ubiquitination and subsequent proteasome degradation of DYRK2 in nucleus. Ubiquitinates IGF1R and SNAI1 and promotes them to proteasomal degradation summary
for MDM2 : Ligases catalyze the joining of two molecules with concomitant hydrolysis of the diphosphate bond in ATP ora similar triphosphate. They belong to the E.C. 6 class, which also includes synthases and carboxylases.Ubiquitin ligases, such as MDM2, E3A and anaphase-promoting complex, attach ubiquitin molecules onto lysineresidues of target proteins. Ubiquitin ligases function as a complex of an E1-activating enzyme, anE2-conjugating enzyme and an E3-ubiquiting enzyme. Using ATP, E1 activates the ubiquitin molecule andtransfer it to E2. E2 interacts with E3 partners to transfer the ubiquitin moeity to the target protein.Generally multiple ubiquitin molecules are attached (polyubiquitination), which marks the target protein forproteasomal degradation. Gene Wiki entry for MDM2 (Mdm2)
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Genomic Viewsfor MDM2 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000012.11 NC_018923.1 NT_029419.12 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the MDM2 gene promoter: AP-1 Other transcription factors Search SABiosciences Chromatin IP Primers for MDM2 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat MDM2
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 12q14.3-q15 Ensembl cytogenetic band: 12q15 HGNC cytogenetic band: 12q13-q14 MDM2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 12 GeneLoc Exon Structure
GeneLoc location for GC12P069201: view genomic region
(about GC identifiers )
Start:
69,201,956 bp from pter
End:
69,239,214 bp from pter
Size:
37,259 bases
Orientation:
plus strand
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Proteinsfor MDM2 gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: MDM2_HUMAN, Q00987 (See
protein sequence )Recommended Name: E3 ubiquitin-protein ligase Mdm2 Size : 491 amino acids; 55233 Da
Subunit : Binds p53/TP53, TP73/p73, ARF/P14, PML, RBL5 and RP11, and specifically to RNA. Can interact with RB1,E1A-associated protein EP300 and the E2F1 transcription factor. Forms a ternary complex with p53/TP53 and WWOX. Interacts with CDKN2AIP, MTBP, RFWD3, TBRG1, USP7, PYHIN1, UBXN6, and RBBP6. Isoform Mdm2-F does not interact with p53/TP53. Interacts with and ubiquitinates HIV-1 Tat. Interacts with ARRB1 and ARRB2. Interacts (isoform 2) with PSMA3. Found in a trimeric complex with MDM2, MDM4 and UPB2. Interacts with USP2 (via N-terminus and C-terminus). Interacts with MDM4. Part of a complex with MDM2, DAXX, RASSF1 and USP7. Part of a complex with DAXX, MDM2 and USP7. Interacts directly with DAXX and USP7. Interacts (via C-terminus) with RASSF1 isoform A (via N-terminus); the interaction is independent of TP53. Interacts with APEX1; leading to its ubiquitination and degradation. Interacts with RYBP; this inhibits ubiquitination of TP53. Identified in a complex with RYBP and p53/TP53. Also component of the TRIM28/KAP1-MDM2-p53/TP53 complex involved in regulating p53/TP53 stabilization and activity. Binds directly both p53/TP53 and TRIM28. Component of the TRIM28/KAP1-ERBB4-MDM2 complex involved in connecting growth factor responses with DNA damage. Interacts directly with both TRIM28 and ERBB4 in the complex. Interacts with DYRK2. Interacts with IGF1R. Interacts with TRIM13; the interaction ubiquitinates MDM2 leading to its proteasomal degradation. Interacts with SNAI1; this interaction promotes SNAI1 ubiquitination. Interacts with NOTCH1 (via intracellular domain). Interacts with FHIT
Subcellular location : Nucleus, nucleoplasm. Cytoplasm. Nucleus, nucleolus. Note=Expressed predominantly in thenucleoplasm. Interaction with ARF(P14) results in the localization of both proteins to the nucleolus. The nucleolar localization signals in both ARF(P14) and MDM2 may be necessary to allow efficient nucleolar localization of both proteins. Colocalizes with RASSF1 isoform A in the nucleus
Miscellaneous : MDM2 RING finger mutations that failed to ubiquitinate p53 in vitro did not target p53 for degradationwhen expressed in cells
6/36 PDB 3D structures from and Proteopedia for MDM2 (see all 36 ):1RV1 (3D)
  1T4E (3D)
  1T4F (3D)
  1YCR (3D)
  1Z1M (3D)
  2AXI (3D)
 
Secondary accessions : A6NL51 A8K2S6 Q13226 Q13297 Q13298 Q13299 Q13300 Q13301 Q53XW0 Q71TW9 Q8WYJ1Q8WYJ2 Q9UGI3 Q9UMT8 Alternative splicing : 11 isoforms : Q00987-1 Q00987-2 Q00987-3 Q00987-4 Q00987-5 Q00987-6 Q00987-7 Q00987-8 Q00987-9 Q00987-10 Q00987-11 Explore the universe of human proteins at neXtProt for MDM2: NX_Q00987 Post-translational modifications:
Phosphorylated in response to ionizing radiation in an ATM-dependent manner. Phosphorylation on Ser-166 by SGK1 activates ubiquitination of p53/TP531
Auto-ubiquitinated; which leads to proteasomal degradation. Also ubiquitinated by TRIM13. Deubiquitinated by USP2 leads to its accumulation and increases deubiquitination and degradation of p53/TP53. Deubiquitinated by USP7 leading to its stabilization1
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_Q00987 4/13 DME Specific Peptides for MDM2 (Q00987 ) (see all 13 )MDM2 Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins: NP_002383.2 ENSEMBL proteins: ENSP00000417281 ENSP00000310742 ENSP00000429021 ENSP00000258148 ENSP00000444430 ENSP00000377067 ENSP00000427828 ENSP00000439238 ENSP00000377068 ENSP00000441841 ENSP00000377062 ENSP00000429692 ENSP00000299252 ENSP00000431110 ENSP00000353611 ENSP00000430257 ENSP00000444597 ENSP00000445222 ENSP00000445030 ENSP00000444566 ENSP00000443450 ENSP00000444028 ENSP00000377065 ENSP00000266624 ENSP00000335096 ENSP00000430906 ENSP00000258149 ENSP00000348637 ENSP00000440932 ENSP00000410694 ENSP00000377064 Reactome Protein details: Q00987 Human Recombinant Protein Products: Gene Ontology (GO): 5/10 cellular component terms (GO ID links to tree view) (see all 10 ): About this table
MDM2 for ontologies About GeneDecksing MDM2 Antibody Products: Assay Products for MDM2:
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Protein
Domains / Familiesfor MDM2 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
MDM2 for domains About GeneDecksing 5/6 InterPro domains/families (see all 6 ):
Graphical View of Domain Structure for InterPro Entry Q00987 ProtoNet protein and cluster: Q00987
2 Blocks protein families : IPB001841 Zn-finger IPB001876 Zn-finger UniProtKB/Swiss-Prot: MDM2_HUMAN, Q00987 Domain : Region I is sufficient for binding p53 and inhibiting its G1 arrest and apoptosis functions. It also binds p73and E2F1. Region II contains most of a central acidic region required for interaction with ribosomal protein L5 and a putative C4-type zinc finger. The RING finger domain which coordinates two molecules of zinc interacts specifically with RNA whether or not zinc is present and mediates the heterooligomerization with MDM4. It is also essential for its ubiquitin ligase E3 activity toward p53 and itself Similarity : Belongs to the MDM2/MDM4 familySimilarity : Contains 1 RanBP2-type zinc fingerSimilarity : Contains 1 RING-type zinc fingerSimilarity : Contains 1 SWIB domain
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Functionfor MDM2 gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: UniProtKB/Swiss-Prot: MDM2_HUMAN, Q00987 Function : E3 ubiquitin-protein ligase that mediates ubiquitination of p53/TP53, leading to its degradation by theproteasome. Inhibits p53/TP53- and p73/TP73-mediated cell cycle arrest and apoptosis by binding its transcriptional activation domain. Also acts as an ubiquitin ligase E3 toward itself and ARRB1. Permits the nuclear export of p53/TP53. Promotes proteasome-dependent ubiquitin-independent degradation of retinoblastoma RB1 protein. Inhibits DAXX-mediated apoptosis by inducing its ubiquitination and degradation. Component of the TRIM28/KAP1-MDM2-p53/TP53 complex involved in stabilizing p53/TP53. Also component of the TRIM28/KAP1-ERBB4-MDM2 complex which links growth factor and DNA damage response pathways. Mediates ubiquitination and subsequent proteasome degradation of DYRK2 in nucleus. Ubiquitinates IGF1R and SNAI1 and promotes them to proteasomal degradation Induction : By DNA damage
Genatlas biochemistry entry for MDM2 : p53 associated protein 9,(homolog to murine oncogene Mdm2,present on a mouse double minute chromosome),downregulating TP53,acting as an E3 ubiquitin ligase directly transferring ubiquitin and targetting TP53 to proteasome complex for degradation,expressed in different layers of normal skin,amplified in human sarcoma,malignant glioma,angiosarcoma,liposarcoma and anaplastic astrocytoma,and diffuse large B cell lymphoma Enzyme Numbers (IUBMB): EC 6.3.2.- 1 EC 6.3.2 2 Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for MDM2 (see all 4 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for MDM2 (see all 8 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: MDM2 (NM_002392 ) Sino Biological Human cDNA Clone for MDM2 DNA2.0 Custom Codon Optimized Gene
Synthesis Service for MDM2 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat MDM2
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MDM2
Gene Ontology (GO): 5/8 molecular function terms (GO ID links to tree view) (see all 8 ): About this table
MDM2 for ontologies About GeneDecksing 3 GenomeRNAi human phenotypes for MDM2 :Animal Models: Mouse knock-outs for MDM2: Mdm2 tm1Glo Mdm2 tm2.2Glo Mdm2 tm2.3Glo Mdm2 tm1Bay Mdm2 tm1.1Mep 15/21 MGI mutant phenotypes (inferred from 17 alleles ) (MGI details for Mdm2) (see all 21 ):
MDM2 for phenotypes About GeneDecksing
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Pathways & Interactionsfor MDM2 gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Unified GeneCards pathways  - 5/60 super-pathways (see all 60 ) About this table See pathways by source Super-pathway contained gene-specific pathways 1 Signaling by FGFR 2 PIP3 activates AKT signaling 3 Ubiquitinated Orc1 is degraded by the proteasome 4 Chks in Checkpoint Regulation 5 Glioma
Pathway sources See GeneCards unified pathways Show all pathways 5/9 EMD Millipore Pathways for MDM2 (see all 9 )5/15 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for MDM2 (see all 15 )3
Cell Signaling Technology (CST) Pathways for MDM2 1 Tocris Bioscience Pathway for MDM2 5/8 GeneGo (Thomson Reuters) Pathways for MDM2 (see all 8 )5/23 BioSystems Pathways for MDM2 (see all 23 ) 5/41
Reactome Pathways for MDM2 (see all 41 )5/10
Kegg Pathways (Kegg details for MDM2) (see all 10 ):
MDM2 for pathways About GeneDecksing Interactions: SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for MDM2 STRING Interaction
Network Preview (showing 5 interactants - click image to see 25)5/491 Interacting proteins for MDM2 (Q00987 1 , 2 , 3 ENSP00000417281 4 ) via UniProtKB, MINT, STRING , and/or I2D (see all 491 )Interactant Interaction Details GeneCard External ID(s) TP53 P04637 1 , 2 , 3 , ENSP00000269305 4 EBI-389668,EBI-366083 MINT-6540920 MINT-4793511 MINT-6823775 MINT-7013943 MINT-8303857 MINT-6540905 MINT-68742 MINT-8385459 MINT-56681 MINT-8374464 MINT-58468 MINT-7013791 MINT-68743 MINT-7013956 MINT-4545014 MINT-8339574 MINT-4049631 MINT-6540776 MINT-6801380 MINT-8374452 MINT-58465 MINT-7013688 MINT-7013802 MINT-4303990 MINT-8339590 MINT-6665330 MINT-4793467 MINT-8380636 MINT-4049616 MINT-4054304 MINT-7905142 MINT-8385480 MINT-7013780 MINT-6540889 MINT-8385531 MINT-8385552 MINT-8385886 MINT-8388795 MINT-8415355 MINT-6540807 MINT-8391984 MINT-7905326 MINT-6540796 I2D:
score=12 STRING: ENSP00000269305 MDM4 O15151 1 , 2 , 3 , ENSP00000356150 4 EBI-389668,EBI-3932059 MINT-6801769 MINT-2517946 MINT-4054707 MINT-4054771 MINT-6801754 MINT-4054466 MINT-6801730 I2D:
score=7 STRING: ENSP00000356150 RYBP Q8N488 2 , 3 , ENSP00000419494 4 MINT-7013847 MINT-7013730 MINT-7013672 MINT-7013688 MINT-7013864 MINT-7013883 MINT-7013780 MINT-7013760 MINT-7013717 MINT-7013897 MINT-7013745 I2D:
score=2 STRING: ENSP00000419494 PSME3 P61289 2 , 3 , ENSP00000293362 4 MINT-6540807 MINT-6540920 MINT-6540776 MINT-6540837 MINT-6540985 MINT-6540796 MINT-6540853 MINT-6540998 MINT-6540973 I2D:
score=3 STRING: ENSP00000293362 NCL P19338 1 , 2 , 3 , ENSP00000318195 4 EBI-389668,EBI-352553 MINT-8291977 MINT-8291996 MINT-8291950 MINT-8292184 MINT-8292547 MINT-8292023 I2D:
score=3 STRING: ENSP00000318195
About this table Gene Ontology (GO): 5/49 biological process terms (GO ID links to tree view) (see all 49 ): About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0000075 cell cycle checkpoint
TAS -- GO:0000122 negative regulation of transcription from RNA polymerase II promoter
IDA 9271120 GO:0006461 protein complex assembly
IDA 12915590 GO:0006977 DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
TAS -- GO:0007089 traversing start control point of mitotic cell cycle
IEA --
MDM2 for ontologies About GeneDecksing
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Drugs & Compoundsfor MDM2 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section
MDM2 for compounds About GeneDecksing Compounds for MDM2 available from Tocris Bioscience About this table Compound Action
CAS
# NSC 66811 MDM2 inhibitor. Disrupts MDM2-p53 interaction [6964-62-1] Nutlin-3 MDM2 antagonist; inhibits MDM2-p53 interaction [548472-68-0] RITA p53-MDM2 interaction inhibitor; antitumor [213261-59-7]
4 HMDB Compounds for MDM2 About this table 2 DrugBank Compounds for MDM2 About this table 10/102 Novoseek chemical compound relationships for MDM2 gene (see all 102 ) About this table
Compound
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
noxa
55.7
7
18340116 (1), 14749479 (1), 19934289 (1), 17043642 (1) (see all 7 )
leptomycin b
53.6
13
10222137 (3), 9819415 (2), 12653667 (1), 17178878 (1) (see all 6 )
10-hydroxycamptothecin
47.4
3
12149568 (1), 10493945 (1), 13130078 (1)
mg 132
46.3
10
9438391 (2), 12640129 (1), 16571800 (1), 11526482 (1) (see all 7 )
camptothecin
44.1
11
19261878 (1), 19136059 (1), 10399957 (1), 17056014 (1) (see all 6 )
cisplatin
39.1
61
16815295 (6), 7761100 (4), 11761456 (4), 9700726 (3) (see all 23 )
p202
38.9
2
8910340 (1)
adriamycin
38.4
20
10637478 (3), 12640129 (2), 10775510 (2), 15064747 (2) (see all 11 )
doxorubicin
35.4
28
9548451 (4), 10544021 (2), 11964305 (2), 14766674 (2) (see all 15 )
oligonucleotide
33.8
44
18038763 (4), 11894120 (2), 12149568 (2), 11072252 (2) (see all 20 )
Search CenterWatch for drugs/clinical trials and news about MDM2
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Transcriptsfor MDM2 gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for MDM2 gene (11 alternative transcripts): NM_002392.4 NM_001145336.1 NM_001145337.1 NM_001145339.1 NM_001145340.1 NM_006878.3 NM_006879.3 NM_006880.2 NM_006881.3 NM_006882.3 NM_032739.1 Unigene Clusters for MDM2:
Mdm2, p53 E3 ubiquitin protein ligase homolog (mouse) Hs.484551 [show with all ESTs ] , Hs.733536 [show with all ESTs ] Unigene Representative Sequences: NM_002392 , JX015388 18/38 Ensembl transcripts including schematic representations, and UCSC links where relevant (see all 38 ): ENST00000462284 (uc001sui.3 uc021rad.1 uc009zqx.3 uc001sun.4 uc009zra.3 uc021raf.1 uc009zrc.3 uc009zrd.3 uc009zre.3 uc001suo.3 uc009zrf.3 uc009zrg.3 uc009zrh.3 uc021rag.1 uc021rah.1 uc021rai.1 uc021raj.1 )ENST00000311420 ENST00000493419 ENST00000393417 (uc009zrb.1 ) ENST00000258148 ENST00000539479 (uc009zqy.1 ) ENST00000393415 (uc021rae.1 ) ENST00000523991 ENST00000543323 ENST00000393416 ENST00000544561 ENST00000393410 ENST00000496959 ENST00000299252 ENST00000481186 ENST00000360430 ENST00000517852 ENST00000545204 Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for MDM2 (see all 4 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for MDM2 (see all 8 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: MDM2 (NM_002392 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for MDM2 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat MDM2
Additional cDNA sequence: AF385326.1 AJ278976.1 AJ278977.1 AJ278978.1 AJ550516.1 AJ550518.1 AJ550520.1 JX015381.1 JX015382.1 JX015383.1 JX015384.1 JX015385.1 JX015387.1 JX015388.1
24/27 DOTS entries (see all 27 ): DT.92448784 DT.100787335
DT.95193404 DT.91749816 DT.95193408 DT.100686963 DT.121211579 DT.204679 DT.121211593 DT.100787329 DT.40118121 DT.451569 DT.121167413 DT.92448783 DT.100027326 DT.100651391 DT.100787331 DT.40118120 DT.75138122 DT.91749814 DT.95193415 DT.95193421 DT.95306934 DT.95312544 24/214 AceView cDNA sequences (see all 214 ):
BM557395 AA825908 AI478408 BG532258 AI373062 BM980488 AI824182 BE018851 CB269619 AI804945 U33199 NM_006880 BQ001500 BQ014357 BU150642 AF385325 AJ491698 BX491664 BM463523 AA470116 AJ550518 AF385323 AF201371 U33200 GeneLoc Exon Structure 5/16 Alternative Splicing Database (ASD) splice patterns (SP) for MDM2 (see all 16 ) About this scheme ExUns: 1a · 1b · 1c ^ 2a · 2b ^ 3 ^ 4 ^ 5 ^ 6a · 6b ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13a · 13b · 13c SP1 :             -   -     -                     SP2 :             -   -   -   -                     SP3 :             -   -     -     -   -               SP4 :             -   -     -                     SP5 :             -   -   -   -                    
ECgene alternative splicing isoforms for MDM2
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Expression for MDM2 gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section MDM2 expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: TGCAAAGAAG
About this image MDM2 expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table 1 LifeMap In Vivo Development Anatomical Compartment/Cell Tissue Anatomical Compartment
Cell Category (developmental path) Somite Lumbar Vertebral Body Somite Expression: Positive Negative
Selective markerExperimental details:
Curated
Microarrays
In-situ hybridization
See MDM2 Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for MDM2 SOURCE GeneReport for Unigene clusters: Hs.484551 Hs.733536 UniProtKB/Swiss-Prot: MDM2_HUMAN, Q00987 Tissue specificity : Ubiquitous. Isoform Mdm2-A, isoform Mdm2-B, isoform Mdm2-C, isoform Mdm2-D, isoform Mdm2-E, isoformMdm2-F and isoform Mdm2-G are observed in a range of cancers but absent in normal tissues SABiosciences Expression via Pathway-Focused PCR Arrays including MDM2 (see all 11 ): Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for MDM2Browse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat MDM2 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat MDM2 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat MDM2 In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MDM2
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Orthologsfor MDM2 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of chordates.
Orthologs for MDM2 gene from 5/16 species (see all 16 ) About this table
Organism
Taxonomic classification
Gene
Description
Human Similarity
Orthology Type
Details
mouse (Mus musculus)
Mammalia
Mdm21 , 5
transformed mouse 3T3 cell double minute 21, 5
82.71(n) 1 83.2(a) 1
 
10 (66.32 cM) 5 17246 1 NM_010786.3 1 NP_034916.1 1 117688888 5
chicken (Gallus gallus)
Aves
MDM21
Mdm2 p53 binding protein homolog (mouse)
72.3(n) 69.31(a)
 
395609 NM_001199384.1 NP_001186313.1
lizard (Anolis carolinensis)
Reptilia
MDM26
--
63(a)
1 ↔ 1
GL343256.1(1440982-1454929)
African clawed frog (Xenopus laevis)
Amphibia
Xl.108852
Xenopus laevis transcribed sequence with weak similarity more
73.75(n)
 
BQ385125.1
zebrafish (Danio rerio)
Actinopterygii
mdm22
murine double minute 2 homolog
71.63(n)
 
30637 AF356346.1
ENSEMBL Gene Tree for MDM2 (if available)TreeFam Gene Tree for MDM2 (if available)
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Paralogsfor MDM2 gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for MDM2 gene MDM4 2 10 SIMAP similar genes for MDM2 using alignment to 31 protein entries: MDM2_HUMAN (see all proteins ):HDM2 mdm2 L3MBTL2 MDM2 isoform N1_40 DKFZp781B1423 MDM2 isoform KB9 MDM4 DKFZp686B01123 ETFA NEURL1B
MDM2 for paralogs About GeneDecksing 2 Pseudogenes.org Pseudogenes for MDM2 PGOHUM00000259775 PGOHUM00000240593
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Genomic Variantsfor MDM2 gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section UniProtKB/Swiss-Prot: MDM2_HUMAN, Q00987 Polymorphism : A polymorphism in the MDM2 promoter is associated with susceptibility to accelerated tumor formation inboth hereditary and sporadic cancers [MIM:614401]. It also contributes to susceptibility to Li-Fraumeni syndrome, in patients carrying a TP53 germline mutation
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 12 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for MDM2 (69201956 - 69239214 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV) variations for MDM2: -- Human Gene Mutation Database (HGMD) : MDM2 SABiosciences Cancer Mutation PCR Assays
2 SABiosciences qBiomarker Copy Number PCR Arrays containing MDM2 :
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing MDM2
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Disorders
/ Diseasesfor MDM2 gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database , Novoseek ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
MDM2 for disorders About GeneDecksing
OMIM gene information: 164785
OMIM disorders : --UniProtKB/Swiss-Prot: MDM2_HUMAN, Q00987
Note=Seems to be amplified in certain tumors (including soft tissue sarcomas, osteosarcomas and gliomas). A higher frequency of splice variants lacking p53 binding domain sequences was found in late-stage and high-grade ovarian and bladder carcinomas. Four of the splice variants show loss of p53 binding 20/217 diseases for MDM2 (see all 217 ): About MalaCards li-fraumeni syndrome accelerated tumor formation malignant peripheral nerve sheath tumor malignant fibrous histiocytoma adult astrocytic tumour fibrous histiocytoma non-hodgkin lymphoma b-cell non-hodgkin lymphoma retinoblastoma congenital mesoblastic nephroma diffuse large b-cell lymphoma human t-cell leukemia virus type 1 primitive neuroectodermal tumor soft tissue sarcoma non-hodgkin lymphoma, childhood gliomatosis cerebri mesoblastic nephroma atypical lipomatous tumor peripheral primitive neuroectodermal tumor west nile virus 4 diseases from the University of Copenhagen DISEASES database for MDM2 :Cancer Lipoma Li-Fraumeni syndrome Eye disease 10/96 Novoseek disease relationships for MDM2 gene (see all 96 ) About this table
Disease
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
liposarcoma dedifferentiated
84.6
30
15221942 (4), 18500263 (3), 9071997 (2), 18214854 (2) (see all 20 )
tumors
80.8
1210
9671804 (7), 10815906 (5), 10072445 (5), 10918230 (5) (see all 99 )
liposarcoma
78.5
80
18836421 (7), 14694526 (4), 18820664 (3), 19820690 (3) (see all 37 )
retinoblastoma
71.4
60
18644346 (5), 19524506 (3), 18045074 (3), 16966622 (2) (see all 37 )
cancer
70.8
340
16243710 (5), 12149568 (4), 15720187 (4), 17931661 (4) (see all 99 )
sarcoma
70.6
144
18521197 (4), 16160477 (4), 8064888 (4), 14614050 (3) (see all 84 )
glioblastoma
63.4
60
9034372 (6), 9810172 (3), 11212898 (3), 12635658 (3) (see all 30 )
osteosarcoma
62.8
79
8416741 (5), 8781571 (4), 10374529 (3), 15310147 (3) (see all 40 )
li-fraumeni syndrome
61.3
5
16478747 (1), 7923211 (1), 16983111 (1), 16203772 (1) (see all 5 )
anaplastic astrocytoma
56.9
7
12700122 (2), 12241107 (1), 7815080 (1), 9266437 (1) (see all 6 )
Genetic Association Database (GAD): MDM2 Human Genome Epidemiology (HuGE) Navigator: MDM2 (192 documents) Tumor Gene Database (TGDB) : MDM2 Export disorders for MDM2 gene to outside databases
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Publicationsfor MDM2 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for MDM2 gene, integrated from 9 sources (see all 2169 ): (articles sorted by number of sources associating them with MDM2) Utopia : connect your pdf to the dynamic world of online information
Amplification of a gene encoding a p53-associated protein in human sarcomas. (PubMed id 1614537) 1 , 2 , 3 Oliner J.D.... Vogelstein B. (1992) The deubiquitinating enzyme USP2a regulates the p53 pathway by targeting Mdm2. (PubMed id 17290220) 1 , 2 , 9 Stevenson L.F....Saville M.K. (2007) Structure of the MDM2 oncoprotein bound to the p53 tumor suppressor transactivation domain. (PubMed id 8875929) 1 , 2 , 9 Kussie P.H.... Pavletich N.P. (1996) MDM2 promotes proteasome-dependent ubiquitin-independent degradation of retinoblastoma protein. (PubMed id 16337594) 1 , 2 , 9 Sdek P.... Xiao Z.X. (2005) Genetic polymorphisms in cell cycle regulatory genes MDM2 and TP53 are associated with susceptibility to lung cancer. (PubMed id 16287156) 1 , 4, 9 Zhang X....Lin D. (2006) Genetic variants in the MDM2 promoter and lung cancer risk in a Chinese population. (PubMed id 16152608) 1 , 4, 9 Hu Z....Shen H. (2006) Polymorphisms in the MDM2 promoter and risk of breast cancer: a case-control analysis in a Chinese population. (PubMed id 16288830) 1 , 4, 9 Ma H....Shen H. (2006) Activity of MDM2, a ubiquitin ligase, toward p53 or itself is dependent on the RING finger domain of the ligase. (PubMed id 10723139) 1 , 2 , 9 Honda R. and Yasuda H. (2000) Molecular recognition of p53 and MDM2 by USP7/HAUSP. (PubMed id 16474402) 1 , 2 , 9 Sheng Y....Frappier L. (2006) Structural basis of competitive recognition of p53 and MDM2 by HAUSP/USP7: implications for the regulation of the p53-MDM2 pathway. (PubMed id 16402859) 1 , 2 , 9 Hu M.... Shi Y. (2006)
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External Searches for MDM2 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing MDM2 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing MDM2 gene
(According to HUGE )
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Specialized Databases showing MDM2 gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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About This Section Patent Information for MDM2 gene: Search GeneIP for patents involving MDM2 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor MDM2 gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
OriGene Antibodies for MDM2 OriGene shRNA RFP for MDM2 OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for MDM2 OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for MDM2 OriGene Protein Over-expression Lysate for MDM2 Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for MDM2 OriGene 3'-UTR Clone for MDM2 OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for MDM2 OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for MDM2 Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs Browse OriGene full length recombinant human proteins expressed in human HEK293 cells OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for MDM2 OriGene Custom Protein Services for MDM2 OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat MDM2 QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing MDM2 QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat MDM2 QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat MDM2 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat MDM2 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat MDM2
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MDM2 Proteins, Antibodies, CLIAs, and ELISAs
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