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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

MCM4 Gene

protein-coding   GIFtS: 66
GCID: GC08P048873

minichromosome maintenance complex component 4

(Previous name: MCM4 minichromosome maintenance deficient 4 (S. cerevisiae)...)
(Previous symbol: CDC21)
 Explore 12 diseases affiliated with
MCM4 via our new
 Human Malady Compendium 
Biological research products
for MCM4
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Minichromosome Maintenance Complex Component 41 2     MCM4 Minichromosome Maintenance Deficient 4 (S. Cerevisiae)1
CDC211 2 3     NKCD2
CDC541 2     NKGCD2
HCdc211     DNA Replication Licensing Factor MCM42
P1-CDC212 3     Homolog Of S. Pombe Cell Devision Cycle 212
CDC21 Homolog2 3     Minichromosome Maintenance Deficient 42
MGC333101     EC 3.6.4.123
P1-Cdc211     

External Ids:    HGNC: 69471   Entrez Gene: 41732   Ensembl: ENSG000001047387   OMIM: 6026385   UniProtKB: P339913   

Export aliases for MCM4 gene to outside databases

Previous GC identifers: GC08P047965 GC08P048877 GC08P048596 GC08P048923 GC08P049036 GC08P044336


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for MCM4:
The protein encoded by this gene is one of the highly conserved mini-chromosome maintenance proteins (MCM) that are
essential for the initiation of eukaryotic genome replication. The hexameric protein complex formed by MCM proteins is
a key component of the pre-replication complex (pre_RC) and may be involved in the formation of replication forks and
in the recruitment of other DNA replication related proteins. The MCM complex consisting of this protein and MCM2, 6
and 7 proteins possesses DNA helicase activity, and may act as a DNA unwinding enzyme. The phosphorylation of this
protein by CDC2 kinase reduces the DNA helicase activity and chromatin binding of the MCM complex. This gene is mapped
to a region on the chromosome 8 head-to-head next to the PRKDC/DNA-PK, a DNA-activated protein kinase involved in the
repair of DNA double-strand breaks. Alternatively spliced transcript variants encoding the same protein have been
reported. (provided by RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: MCM4_HUMAN, P33991
Function: Acts as component of the MCM2-7 complex (MCM complex) which is the putative replicative helicase essential
for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in
the MCM2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure
of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the
adjacent subunit. The six ATPase active sites, however, are likely to contribute differentially to the complex
helicase activity

Gene Wiki entry for MCM4


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000008.10  NC_018919.1  NT_008183.19  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the MCM4 gene promoter:
         Nkx3-1   C/EBPbeta   Nkx3-1 v4   p53   POU3F2 (N-Oct-5b)   Nkx3-1 v1   Nkx3-1 v2   Nkx3-1 v3   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidMCM4 promoter sequence
   Search SABiosciences Chromatin IP Primers for MCM4

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat MCM4


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 8q11.2   Ensembl cytogenetic band:  8q11.21   HGNC cytogenetic band: 8q12-q13

MCM4 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
MCM4 gene location

GeneLoc information about chromosome 8         GeneLoc Exon Structure

GeneLoc location for GC08P048873:  view genomic region     (about GC identifiers)

Start:
48,872,745 bp from pter      End:
48,890,720 bp from pter
Size:
17,976 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: MCM4_HUMAN, P33991 (See protein sequence)
Recommended Name: DNA replication licensing factor MCM4  
Size: 863 amino acids; 96558 Da
Subunit: Component of the MCM2-7 complex. The complex forms a toroidal hexameric ring with the proposed subunit order
MCM2-MCM6-MCM4-MCM7-MCM3-MCM5 (By simililarity). Interacts with MCMBP
Subcellular location: Nucleus (By similarity)
Miscellaneous: Early fractionation of eukaryotic MCM proteins yielded a variety of dimeric, trimeric and tetrameric
complexes with unclear biological significance. Specifically a MCM467 subcomplex is shown to have in vitro helicase
activity which is inhibited by the MCM2 subunit. The MCM2-7 hexamer is the proposed physiological active complex
Secondary accessions: Q8NEH1 Q99658

Explore the universe of human proteins at neXtProt for MCM4: NX_P33991

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_P33991

  • MCM4 Protein expression data from MOPED and PaxDb:    About this image 
    MCM4 Protein Expression
    REFSEQ proteins (2 alternative transcripts): 
    NP_005905.2  NP_877423.1  

    ENSEMBL proteins: 
     ENSP00000430329   ENSP00000430194   ENSP00000262105   ENSP00000380038   ENSP00000427829  
     ENSP00000428833   ENSP00000427875   ENSP00000430864   ENSP00000429502   ENSP00000431011  
    Reactome Protein details: P33991
    Human Recombinant Protein Products for MCM4: 
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    Novus Biologicals MCM4 Proteins
    Novus Biologicals MCM4 Lysates
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for MCM4

    Gene Ontology (GO): 4 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005634nucleus NAS8265339
    GO:0005654nucleoplasm TAS--
    GO:0005730NOT nucleolus IDA--
    GO:0042555MCM complex IDA17296731

    MCM4 for ontologies           About GeneDecksing



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    Uscn ELISAs and CLIAs for MCM4


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    MCM4 for domains           About GeneDecksing

    5/6 InterPro domains/families (see all 6):
     IPR018525 MCM_CS
     IPR012340 NA-bd_OB-fold
     IPR004039 Rubredoxin-type_fold
     IPR003593 AAA+_ATPase
     IPR001208 MCM_DNA-dep_ATPase

    Graphical View of Domain Structure for InterPro Entry P33991

    ProtoNet protein and cluster: P33991

    2 Blocks protein families:
    IPB001208 MCM family
    IPB008047 Mini-chromosome maintenance (MCM) protein 4 signature


    UniProtKB/Swiss-Prot: MCM4_HUMAN, P33991
    Similarity: Belongs to the MCM family
    Similarity: Contains 1 MCM domain


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Molecular Function:

         UniProtKB/Swiss-Prot Summary: MCM4_HUMAN, P33991
    Function: Acts as component of the MCM2-7 complex (MCM complex) which is the putative replicative helicase essential
    for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in
    the MCM2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure
    of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the
    adjacent subunit. The six ATPase active sites, however, are likely to contribute differentially to the complex
    helicase activity
    Catalytic activity: ATP + H(2)O = ADP + phosphate

         Genatlas biochemistry entry for MCM4:
    cell division cycle 21(CDC21) homolog,involved in an early step of DNA replication,participating in the cell cycle
    control of genome duplication

         Enzyme Number (IUBMB): EC 3.6.4.121

         Gene Ontology (GO): 5/6 molecular function terms (GO ID links to tree view) (see all 6):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003677DNA binding ----
    GO:0003678DNA helicase activity ----
    GO:0003697single-stranded DNA binding IEA--
    GO:0004003contributes to ATP-dependent DNA helicase activity IDA9305914
    GO:0005515protein binding IPI--
         
    MCM4 for ontologies           About GeneDecksing


    Phenotypes:
         8 MGI mutant phenotypes (inferred from 2 alleles(MGI details for Mcm4):
     cellular  digestive/alimentary  embryogenesis  growth/size  hematopoietic system 
     mortality/aging  normal  tumorigenesis 

    MCM4 for phenotypes           About GeneDecksing

    Animal Models:
       inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for MCM4 

    miRNA
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    hsa-miR-651 hsa-miR-570
    SwitchGear 3'UTR luciferase reporter plasmidMCM4 3' UTR sequence
    Inhib. RNA
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    In Situ Assay
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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MCM4


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/13 super-pathways (see all 13About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Ubiquitinated Orc1 is degraded by the proteasome
    8/11 pathways (see all 11)
    Assembly of the pre-replicative complex0.77
    M/G1 Transition0.62
    Switching of origins to a post-replicative state0.70
    Synthesis of DNA0.51
    Orc1 removal from chromatin0.70
    DNA Replication0.49
    Regulation of DNA replication0.68
    Cell Cycle Checkpoints0.42
    2Cell cycle
    Cell cycle1.00
    G1 to S cell cycle control0.38
    Cell cycle0.57
    3Lagging Strand Synthesis
    DNA strand elongation0.65
    Unwinding of DNA0.00
    DNA replication0.56
    4Cell cycle_Start of DNA replication in early S phase
    Cell cycle_Start of DNA replication in early S phase1.00
    Cell cycle Start of DNA replication in early S phase0.98
    5Activation of ATR in response to replication stress
    Activation of ATR in response to replication stress1.00
    G2/M Checkpoints0.86

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    2 EMD Millipore Pathways for MCM4
        Meiosis
    Cell cycle Start of DNA replication in early S phase

    1 Downloadable PowerPoint Slide of QIAGEN Pathway Central Maps for MCM4
        Cell Cycle Control of Chromosomal Replication

    1 Cell Signaling Technology (CST) Pathway for MCM4
        Cell Cycle / Checkpoint Control

    1 GeneGo (Thomson Reuters) Pathway for MCM4
        Cell cycle Start of DNA replication in early S phase

    4 BioSystems Pathways for MCM4 
        G1 to S cell cycle control
    Cell cycle
    DNA Replication
    C-MYB transcription factor network

    5/21        Reactome Pathways for MCM4 (see all 21)
        Activation of ATR in response to replication stress
    Mitotic G1-G1/S phases
    DNA Replication
    Removal of licensing factors from origins
    Cell Cycle


    2         Kegg Pathways  (Kegg details for MCM4):
        DNA replication
    Cell cycle


    MCM4 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for MCM4

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/282 Interacting proteins for MCM4 (P339911, 2, 3 ENSP000002621054) via UniProtKB, MINT, STRING, and/or I2D (see all 282)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    SSRP1Q089452, 3, ENSP000002784124MINT-2984401 MINT-6542674 MINT-2984219 MINT-2984419 MINT-2984494 MINT-8173832 MINT-2984477 MINT-8089790 I2D: score=4 STRING: ENSP00000278412
    HIST1H4AP628053, ENSP000003529804I2D: score=3 STRING: ENSP00000352980
    HIST1H4LP628053, ENSP000003482584I2D: score=3 STRING: ENSP00000348258
    HIST1H4BP628053I2D: score=3 
    HIST1H4CP628053I2D: score=3 
    About this table

    Gene Ontology (GO): 5/10 biological process terms (GO ID links to tree view) (see all 10):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000075cell cycle checkpoint TAS--
    GO:0000082G1/S transition of mitotic cell cycle TAS--
    GO:0000084S phase of mitotic cell cycle TAS--
    GO:0000216M/G1 transition of mitotic cell cycle TAS--
    GO:0000278mitotic cell cycle TAS--

    MCM4 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    MCM4 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for MCM4
    1 Novoseek chemical compound relationship for MCM4 gene    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    hydroxyurea 52.1 4 15037254 (2), 17062569 (1)

    Search CenterWatch for drugs/clinical trials and news about MCM4 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, Sirion Biotech, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for MCM4 gene (2 alternative transcripts): 
    NM_005914.3  NM_182746.2  

    Unigene Cluster for MCM4:

    Minichromosome maintenance complex component 4
    Hs.460184  [show with all ESTs]
    Unigene Representative Sequence: NM_005914
    18 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000518221 ENST00000523944(uc010lxw.2 uc003xqk.2 uc011ldi.2)
    ENST00000262105(uc003xql.2) ENST00000520994 ENST00000520934 ENST00000396826
    ENST00000524086 ENST00000519170 ENST00000519138 ENST00000520637 ENST00000518680
    ENST00000517709 ENST00000519470 ENST00000523853 ENST00000518382 ENST00000524276
    ENST00000521261 ENST00000521151

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    Additional cDNA sequence: 

    AK022899.1 AK296913.1 AK309812.1 AM493756.1 BC031061.1 X74794.1 

    24/31 DOTS entries (see all 31):

    DT.101985052  DT.101985053  DT.101969207  DT.92452784  DT.418116  DT.91831407  DT.101964477  DT.92452786 
    DT.100793310  DT.100793311  DT.100793307  DT.101978428  DT.408996  DT.120635156  DT.120635241  DT.65286115 
    DT.97855210  DT.100793312  DT.102831993  DT.102831995  DT.95267949  DT.97855208  DT.100648381  DT.100793314 

    24/494 AceView cDNA sequences (see all 494):

    AI283408 AI936566 BG248645 BQ676347 AU124670 AW236412 BE796484 BQ897289 
    BM909380 AU120286 BG029854 BC031061 AU131979 AU126357 AI809093 BM844209 
    BM802681 BM912980 AW575728 AI990498 AK022899 BM761229 BU163628 AI685316 

    GeneLoc Exon Structure

    5/13 Alternative Splicing Database (ASD) splice patterns (SP) for MCM4 (see all 13)    About this scheme

    ExUns: 1 ^ 2a · 2b · 2c ^ 3a · 3b ^ 4a · 4b ^ 5a · 5b · 5c · 5d ^ 6 ^ 7 ^ 8 ^ 9a · 9b ^ 10a · 10b ^ 11 ^ 12 ^ 13a · 13b · 13c ^ 14a · 14b ·
    SP1:                                -                 -                                                                       -                                 
    SP2:                                -                 -                                                                       -                                 
    SP3:                                -                 -     -                                                                                                   
    SP4:                                                                                                                                                            
    SP5:                                                                                                                                                            

    ExUns: 14c ^ 15 ^ 16 ^ 17 ^ 18a · 18b · 18c ^ 19a · 19b ^ 20a · 20b
    SP1:        -                 -                                       
    SP2:        -                 -                                       
    SP3:                                                                  
    SP4:                                                                  
    SP5:        -     -           -                                       


    ECgene alternative splicing isoforms for MCM4

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    MCM4 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: GTTTGGCTGC
    MCM4 Expression
    About this image

    MCM4 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table

    Stem Cell Differentiation: 2 LifeMap Cells 
    NameCategory
    PureStem™ progenitor E44 (Embryonic Progenitor Cell)
    PureStem™ progenitor F15 (Embryonic Progenitor Cell)
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization

    See MCM4 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for MCM4

    SOURCE GeneReport for Unigene cluster: Hs.460184
        SABiosciences Expression via Pathway-Focused PCR Array including MCM4: 
              Cell Cycle in human mouse rat

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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of eukaryotes.

    Orthologs for MCM4 gene from 10/38 species (see all 38)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Mcm41 , 5 minichromosome maintenance deficient 4 homolog (S. more1, 5 88.09(n)1
    95.01(a)1
      16 (10.09 cM)5
    172171  NM_008565.31  NP_032591.31 
     156238975 
    chicken
    (Gallus gallus)
    Aves MCM41 minichromosome maintenance complex component 4 77.3(n)
    86.73(a)
      426764  XM_424376.3  XP_424376.2 
    lizard
    (Anolis carolinensis)
    Reptilia MCM46
    --
    85(a)
    1 ↔ 1
    GL343207.1(1525837-1549073)
    African clawed frog
    (Xenopus laevis)
    Amphibia mcm4-A2 minichromosome maintenance deficient 4 77.61(n)    U44049.1 
    zebrafish
    (Danio rerio)
    Actinopterygii mcm42 MCM4 minichromosome maintenance deficient 4, mitotin more 74.85(n)   337598  BC056514.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta dpa1 , 3 pre-replicative complex formation and
    maintenance more3
    disc proliferation abnormal1
    61(a)3
    59.73(n)1
    63.34(a)1
      356791  NM_057837.41  NP_477185.11 
    worm
    (Caenorhabditis elegans)
    Secernentea mcm-41 , 3 Protein MCM-41 53(a)3
    54.98(n)1
    55.82(a)1
      I(2318428-2321811)3
    1717931  NM_058561.41  NP_490962.11 
    baker's yeast
    (Saccharomyces cerevisiae)
    Saccharomycetes MCM4(YPR019W)4
    MCM41
    Essential helicase component of heterohexameric MCM2-7 more4
    Mcm4p1
    52.31(n)1
    50.14(a)1
      16(596750-599551)4
    8561301, 4  NP_015344.11, 4 
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons MCM41 minichromosome maintenance protein 4 (cell division more 53.43(n)
    46.73(a)
      816142  NM_127197.4  NP_179236.3 
    rice
    (Oryza sativa)
    Liliopsida --
    MCM4 - Putative minichromosome maintenance MCM com...
    41(a)
    1 ↔ 1
    1(20190980-20195959)


    ENSEMBL Gene Tree for MCM4 (if available)
    TreeFam Gene Tree for MCM4 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for MCM4 gene
    MCM82  
    7 SIMAP similar genes for MCM4 using alignment to 10 protein entries:     MCM4_HUMAN (see all proteins):
    MCM3    FLJ00323    MCM6    MCM7    MCM2    MCM5
    HCC5

    MCM4 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/411 NCBI SNPs in MCM4 are shown (see all 411    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 8 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs70154081,2
    C--44334276(+) tttttG/Tgggac 2 -- int1 trp30--------
    rs117814241,2
    H--44334383(+) cctccC/Tgaata 2 -- int10--------
    rs100922571,2
    A--44334972(+) cgaggC/Tggggg 2 -- int10--------
    rs81780001,2
    C,F,H--44335468(-) CCGCGG/AGTGGG 2 -- int17Minor allele frequency- A:0.00NS EA NA 552
    rs173343051,2
    C,F--44336415(+) GAGGCC/TCCGCC 2 -- us2k12Minor allele frequency- T:0.02NS NA 182
    rs172875481,2
    C,F,H--44336860(+) GCTGCC/TGCTTG 2 -- us2k16Minor allele frequency- T:0.01NS NA 736
    rs173343121,2
    C,F--44337280(+) GCTTTA/GTAACA 2 -- us2k14Minor allele frequency- G:0.02NS NA 184
    rs1857483481,2
    --48870910(+) AGAAAA/GCAGCC 4 -- us2k1 int10--------
    rs797088941,2
    F--48870997(+) CTGTAA/GGAGTA 4 -- us2k1 int12Minor allele frequency- G:0.04WA EA 238
    rs1436325151,2
    --48871093(+) TCAAGC/TGAAAG 4 -- int1 us2k10--------

    HapMap Linkage Disequilibrium report for MCM4 (48872745 - 48890720 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 1 variation for MCM4
         1 CNV: 3730
    Human Gene Mutation Database (HGMD): MCM4

    SABiosciences Cancer Mutation PCR Assays
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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    MCM4 for disorders           About GeneDecksing

    OMIM gene information: 602638    OMIM disorders: --

    12 diseases for MCM4:    About MalaCards
    merkel cell carcinoma    chronic lymphocytic leukemia    lymphocytic leukemia    medulloblastoma
    esophageal cancer    esophagitis    leukemia    lung cancer
    breast cancer    melanoma    carcinoma    malaria

    2 Novoseek disease relationships for MCM4 gene    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    metastasis 0 1 17222376 (1)
    tumors 0 5 16595783 (1), 16051427 (1), 20398247 (1)

    Human Genome Epidemiology (HuGE) Navigator: MCM4 (4 documents)

    Export disorders for MCM4 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for MCM4 gene, integrated from 9 sources (see all 129):
    (articles sorted by number of sources associating them with MCM4)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. A human homologue of the yeast replication protein Cdc21. Interactions with other Mcm proteins. (PubMed id 7601140)1, 2, 3, 9 Musahl C.... Knippers R. (1995)
    2. The promoters for human DNA-PKcs (PRKDC) and MCM4: divergently transcribed genes located at chromosome 8 band q11. (PubMed id 9465298)1, 2, 9 Connelly M.A.... Anderson C.W. (1998)
    3. MCM4 and PRKDC, human genes encoding proteins MCM4 and DNA-PKcs, are close neighbours located on chromosome 8q12-->q13. (PubMed id 9284934)1, 2, 9 Ladenburger E.M.... Knippers R. (1997)
    4. Identification and characterization of a novel component of the human minichromosome maintenance complex. (PubMed id 17296731)1, 2, 9 Sakwe A.M....Frappier L. (2007)
    5. Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. (PubMed id 17081983)1, 2 Olsen J.V....Mann M. (2006)
    6. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    7. A DNA helicase activity is associated with an MCM4, -6, and -7 protein complex. (PubMed id 9305914)1, 2 Ishimi Y. (1997)
    8. The P1 family: a new class of nuclear mammalian proteins related to the yeast Mcm replication proteins. (PubMed id 8265339)1, 2 Hu B.... Knippers R. (1993)
    9. Site-specific phosphorylation of MCM4 during the cell cycle in mammalian cells. (PubMed id 16519687)1, 9 Komamura-Kohno Y....Ishimi Y. (2006)
    10. [Expression and significance of MCM4 in esophageal cancer] (PubMed id 17222376)1, 9 Huang X.P....Rong T.H. (2007)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 4173 HGNC: 6947 AceView: MCM4 Ensembl:ENSG00000104738 euGenes: HUgn4173
    ECgene: MCM4 Kegg: 4173 H-InvDB: MCM4

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for MCM4 Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for MCM4 Genetics and Cytogenetics in Oncology and Haematology
    NIEHS-SNPshttp://egp.gs.washington.edu/data/mcm4/

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for MCM4 gene:
    Search GeneIP for patents involving MCM4

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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