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Aliases & Descriptions for MCL1
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases BCL2L3 1 , 2 , 3 Bcl2-L-3 3 EAT 2 MCL1L 2 MCL1S 2 MGC104264 2 MGC1839 2 Mcl-1 1 , 2 OTTHUMP00000032794 2 OTTHUMP00000032795 2 TM 2 mcl1/EAT 3
Descriptions Bcl-2-like protein 3 3 Bcl-2-related protein EAT/mcl1 3 induced myeloid leukemia cell differentiation protein Mcl-1 2 myeloid cell leukemia sequence 1 2 myeloid cell leukemia sequence 1 (BCL2-related) 2 myeloid cell leukemia sequence 1, isoform 1 2
Search outside databases for aliases for MCL1 genePrevious GC identifers: GC01M148388 GC01M146294 GC01M147322 GC01M147763 GC01M147360
Summaries for MCL1 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for MCL1 : The protein encoded by this gene belongs to the Bcl-2 family. Alternative splicing occurs at thislocus and two transcript variants encoding distinct isoforms have been identified. The longer geneproduct (isoform 1) enhances cell survival by inhibiting apoptosis while the alternatively splicedshorter gene product (isoform 2) promotes apoptosis and is death-inducing. [provided by RefSeq] UniProtKB/Swiss-Prot: MCL1_HUMAN, Q07820 Function : Involved in the regulation of apoptosis versus cell survival, and in the maintenance ofviability but not of proliferation. Mediates its effects by interactions with a number of otherregulators of apoptosis. Isoform 1 inhibits apoptosis while isoform 2 promotes it
Gene Wiki entry for MCL1
Genomic Location for MCL1
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the MCL1 gene Entrez Gene cytogenetic band: 1q21 Ensembl cytogenetic band: 1q21.2 HGNC cytogenetic band: 1q21 MCL1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 1 GeneLoc Exon Structure
GeneLoc location for GC01M148813:
(about GC identifiers )
Start:
148,813,658 bp from pter
End:
148,818,760 bp from pter
Size:
5,103 bases
Orientation:
minus strand
RefSeq DNA sequence: NC_000001.9 NT_004487.18 Proteins for MCL1
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: MCL1_HUMAN, Q07820 (See
protein sequence )Recommended Name: Induced myeloid leukemia cell differentiation protein Mcl-1 Size : 350 amino acids; 37337 Da
Subunit : Interacts with BAD, BOK, BIK and BFM (By similarity). Interacts with PMAIP1. Isoform 1interacts with BAX, BAK1, TPT1 and BCL2L11. Heterodimer of isoform 1 and isoform 2. Homodimers ofisoform 1 or isoform 2 are not detected. Isoform 2 does not interact with pro-apoptototicBCL2-related proteins
Subcellular location : Membrane; Single-pass membrane protein (Potential). Cytoplasm. Mitochondrion.Nucleus, nucleoplasm. Note=Cytoplasmic, associated with mitochondria
PDB structures from and Proteopedia : 2NL9 (3D)
 2NLA (3D)
 2PQK (3D)
 3D7V (3D)
 
Secondary accessions : B2R6B2 Q9HD91 Q9NRQ3 Q9NRQ4 Q9UHR7 Q9UHR8 Q9UHR9 Q9UNJ1Alternative splicing : 2 isoforms : Q07820-1 Q07820-2
Post-translational modifications:
Cleaved by CASP3 during apoptosis. In intact cells cleavage occurs preferentially after Asp-127,yielding a pro-apoptotic 28 kDa C-terminal fragment1
Rapidly degraded in the absence of phosphorylation on Thr-163 in the PEST region1
Phosphorylated on Thr-163. Treatment with taxol or okadaic acid induces phosphorylation onadditional sites1
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (2 alternative transcripts):
NP_068779.1 NP_877495.1 ENSEMBL proteins: ENSP00000309973 ENSP00000358022 Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 5/6 Gene Ontology (GO) cellular component terms (links to tree view) (see all 6
):
About this table Antibodies for MCL1: Invitrogen Antibodies for MCL1 Millipore Mono- and Polyclonal Antibodies for the study of MCL1 Sigma-Aldrich Antibodies for MCL1 R&D Systems Antibodies for MCL1 (Mcl-1) Cell Signaling Technology (CST) Antibodies for MCL1   (Mcl-1) Antibodies from Abcam (MCL1 ), each with their Abpromise SM Monoclonal and Polyclonal Antibodies from Abnova (MCL1 ) Novus Biologicals Antibodies for MCL1
Assays for MCL1:
Protein
Domains/ Families for MCL1(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry Q07820 ProtoNet protein and cluster: Q07820
1 Blocks protein family : IPB000712 Apoptosis regulator Bcl-2 protein UniProtKB/Swiss-Prot: MCL1_HUMAN, Q07820 Similarity : Belongs to the Bcl-2 family
Gene Function for MCL1
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_021960 Applied Biosystems Silencer ® siRNAs for MCL1 Sigma-Aldrich siRNA and siRNA Panels for MCL1 Sigma-Aldrich shRNA Panels and shRNA for MCL1 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_021960                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_021960                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_021960  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_021960 UniProtKB/Swiss-Prot: MCL1_HUMAN, Q07820 Function : Involved in the regulation of apoptosis versus cell survival, and in the maintenance ofviability but not of proliferation. Mediates its effects by interactions with a number of otherregulators of apoptosis. Isoform 1 inhibits apoptosis while isoform 2 promotes it Induction : Expression increases early during phorbol-ester induced differentiation along themonocyte/macrophage pathway in myeloid leukemia cell lines ML-1. Rapidly up-regulated by CSF2 inML-1 cells. Up-regulated by heat-shock induced differentiation. Expression increases early duringretinoic acid-induced differentiation
Genatlas biochemistry entry for MCL1 :myeloid cell leukemia 1,involved in programmed myeloid cell differentiation,with homology to BCL2
5 MGI mutant phenotypes (inferred from 5 alleles ) (MGI details for Mcl1) :3 Gene Ontology (GO) molecular function terms (links to tree view) :
About this table
Pathways & Interactions for MCL1
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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Gene Network CentralTM Interacting Genes and Proteins Network for MCL1 5/87 Interacting proteins for MCL1 (Q07820 1 , 2 ENSP00000358022 3 ) via UniProtKB, MINT, and/or STRING (see all 87
)About this table 5/6 Gene Ontology (GO) biological process terms (links to tree view) (see all 6
):
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Drugs & Compounds for MCL1 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Compounds for MCL1 available from Tocris Bioscience 10/31 Novoseek chemical compound relationships for MCL1 gene (see all 31
)
Compound
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
noxa
85.83
58
19372561 (7), 17018621 (4), 16782027 (3), 17971907 (3) (see all 23 )
pd-184352
60.84
1
17218385 (1)
pd 98,059
48.06
13
12606824 (2), 11314001 (1), 12479056 (1), 10961875 (1) (see all 10 )
[alcl]
46.88
8
15858125 (4), 17430669 (2)
epoxomicin
44.89
1
16876795 (1)
phosphatidylinositol
43.99
12
18036649 (2), 11368774 (2), 10454566 (1), 11390502 (1) (see all 10 )
tyrosine
43.42
9
12438243 (1), 18088462 (1), 15753661 (1), 11767000 (1) (see all 9 )
vanadate
42.97
1
12359245 (1)
wortmannin
36.51
10
11390502 (2), 12606824 (2), 11314001 (1), 17935137 (1) (see all 7 )
bryostatin 1
34.10
4
15291360 (2), 16465244 (2)
About this table
Transcripts for MCL1(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_021960 Sigma-Aldrich siRNA and siRNA Panels for MCL1 Sigma-Aldrich shRNA Panels and shRNA for MCL1 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_021960 NM_182763
REFSEQ mRNAs for MCL1 gene (2 alternative transcripts): NM_021960.3 NM_182763.1
Applied Biosystems TaqMan ® Gene Expression Assays: NM_021960 NM_182763
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_021960                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_021960                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_021960  
Additional cDNA sequence: AF118124.1 AF118276.1 AF118277.1 AF118278.1 AF203373.1 AK294462.1 AK297217.1 AK300499.1 AK304775.1 AK312508.1 AK316267.1 BC017197.2 BC071897.1 BC107735.1 BT006640.1 CR610973.1 CR618814.1 CR621920.1 CR625890.1 L08246.1
24/26 DOTS entries (see all 26
): DT.95301973 DT.449911 DT.95301975 DT.92454096 DT.92454081 DT.121443994 DT.100883419 DT.121443999 DT.92025156 DT.95301970 DT.95210901 DT.95301989 DT.95301980 DT.101964311 DT.121444038 DT.121443995 DT.121444001 DT.121444002 DT.121444016 DT.121444037 DT.40108891 DT.95301956 DT.99943281 DT.100883430
24/849 AceView cDNA sequences (see all 849
):CA310292 CB146739 BM725225 AW593473 CB852940 BI093508 AI582805 BU626282 CA421486 BE673943 BI492038 BM985298 AA040674 BM826993 AA521334 AA278892 BU615283 BM671008 BM818791 BQ012814 AA564590 BQ380037 AI601134 AA206920
highest scoring ESTs for MCL1 :L08246 AA012976 AA017360 AA035539 AA278299 AA283692 AA287559 AA287701 AA291667 AA305899
Unigene Cluster for MCL1: Myeloid cell leukemia sequence 1 (BCL2-related) Hs.719112 [show with all ESTs ] Unigene Representative Sequence: NM_021960 GeneLoc Exon Structure 4 Alternative Splicing Database (ASD) splice patterns (SP) for MCL1 ExUns: 1a · 1b · 1c ^ 2a · 2b · 2c ^ 3a · 3b SP1 :       -           SP2 :       -   -         SP3 :       -   -   -       SP4 :                
About this scheme ECgene alternative splicing isoforms for MCL1 2 Ensembl transcripts including schematic representations : ENST00000307940
ENST00000369026
Expression for MCL1
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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MCL1 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for MCL1 1 / 2 / 3
8 probe-sets matching MCL1 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: --SOURCE GeneReport for Unigene cluster: Hs.719112 Expression variation in blood from EXPOLDB for MCL1
Orthologs for MCL1
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for MCL1 gene from 5/9 species (see all 9
)
About this table Species with no ortholog for MCL1 ENSEMBL Gene Tree for MCL1 Paralogs for MCL1 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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SNPs/Variants for MCL1 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for MCL1 (up to first 250kb)
Disorders & Mutations for MCL1
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 159552 10/75 Novoseek disease relationships for MCL1 gene (see all 75
)
Disease
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
lymphocytic leukemia chronic b-cell
68.89
5
14695629 (2), 19092849 (1), 15291360 (1), 15728130 (1)
leukemia lymphocytic chronic
68.77
10
15126604 (2), 19008456 (2), 12210808 (1), 18599795 (1) (see all 8 )
leukemia
59.12
39
17909059 (2), 9446661 (2), 12149273 (2), 16109713 (2) (see all 26 )
myeloma
58.62
39
15459900 (4), 10583232 (4), 15902294 (3), 10602002 (3) (see all 20 )
tumors
54.91
100
8909234 (4), 9060818 (4), 16361547 (3), 17561513 (3) (see all 58 )
myeloid leukemia
54.01
9
16761109 (3), 16806223 (1), 7682708 (1), 12788061 (1) (see all 7 )
cancer
53.60
45
16761109 (2), 18399351 (2), 17495324 (2), 19099185 (2) (see all 32 )
lymphoma
47.74
22
17430669 (2), 11389033 (2), 8080035 (1), 15854132 (1) (see all 16 )
lymphoma follicular
47.21
6
16487175 (2), 15343511 (2), 12210808 (1), 7835896 (1)
myeloid leukemia chronic
47.20
7
17599053 (2), 18088462 (1), 17595328 (1), 15626746 (1) (see all 6 )
About this table Human Genome Epidemiology Navigator: MCL1 (1 document)
Medical News for MCL1 (Possibly Related Articles in
Doctor's Guide )
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Publications for MCL1 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/599 PubMed articles for MCL1 gene (see all 599
): MCL1, a gene expressed in programmed myeloid cell differentiation, has sequence similarity to BCL2. (PubMed id 7682708) 1, 2, 3, 4 Kozopas K.M.... Craig R.W. (1993) MCL-1S, a splicing variant of the antiapoptotic BCL-2 family member MCL-1, encodes a proapoptotic protein possessing only the BH3 domain. (PubMed id 10837489) 1, 3, 4 Bae J.... Hsueh A.J.W. (2000) Physical and functional interaction between myeloid cell leukemia 1 protein (MCL1) and fortilin. The potential role of MCL1 as a fortilin chaperone. (PubMed id 12149273) 1, 3, 4 Zhang D.... Fujise K. (2002) Mcl-1 is required for Akata6 B-lymphoma cell survival and is converted to a cell death molecule by efficient caspase-mediated cleavage. (PubMed id 15122313) 1, 3, 4 Michels J....Packham G. (2004) Mcl-1 is an immediate-early gene activated by the granulocyte- macrophage colony-stimulating factor (GM-CSF) signaling pathway and is one component of the GM-CSF viability response. (PubMed id 9671497) 1, 3, 4 Chao J.-R....Yang-Yen H.-F. (1998) Mule/ARF-BP1, a BH3-only E3 ubiquitin ligase, catalyzes the polyubiquitination of Mcl-1 and regulates apoptosis. (PubMed id 15989957) 1, 3, 4 Zhong Q.... Wang X. (2005) Human and mouse chromosomal mapping of the myeloid cell leukemia-1 gene: MCL1 maps to human chromosome 1q21, a region that is frequently altered in preneoplastic and neoplastic disease. (PubMed id 7835896) 1, 2, 3 Craig R.W....Griffin C.A. (1994) Exon skipping in Mcl-1 results in a Bcl-2 homology domain 3 only gene product that promotes cell death. (PubMed id 10766760) 1, 3, 4 Bingle C.D....Whyte M.K.B. (2000) Mitochondrial p53 activates Bak and causes disruption of a Bak-Mcl1 complex. (PubMed id 15077116) 1, 3, 4 Leu J.I.-J.... George D.L. (2004) MCL1 is phosphorylated in the PEST region and stabilized upon ERK activation in viable cells, and at additional sites with cytotoxic okadaic acid or taxol. (PubMed id 15241487) 1, 3, 4 Domina A.M.... Craig R.W. (2004)
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Genome Databases showing MCL1
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing MCL1
(According to HUGE )
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Specialized Databases showing MCL1 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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About This Section
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-- Services for MCL1 (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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Products for MCL1:
Antibodies & Assays for MCL1   (Mcl-1)
Recombinant Proteins (MCL1 ) Antibodies (MCL1 )
Tocris compounds for MCL1
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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009