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Aliases for MCHR2-AS1 Gene

Subcategory (RNA class) for MCHR2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for MCHR2-AS1 Gene

  • MCHR2 Antisense RNA 1 2 3 5

External Ids for MCHR2-AS1 Gene

Previous GeneCards Identifiers for MCHR2-AS1 Gene

  • GC06P100444

Summaries for MCHR2-AS1 Gene

GeneCards Summary for MCHR2-AS1 Gene

MCHR2-AS1 (MCHR2 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MCHR2-AS1 Gene

Genomics for MCHR2-AS1 Gene

Regulatory Elements for MCHR2-AS1 Gene

Enhancers for MCHR2-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06G099822 0.7 Ensembl 0.1 -170.8 -170808 0.9 CTCF ZNF654 FOXA2 REST RAD21 TEAD3 ZNF316 ZSCAN5C SMC3 MAFK RPS3P5 MCHR2-AS1 ENSG00000199303 GC06M099643
GH06G099745 0.7 ENCODE 0.1 -248.0 -248002 1.3 CTCF ZNF654 FOXA3 HLF TRIM22 CEBPB CEBPG REST ZNF2 RAD21 RPS3P5 PNISR LOC101927365 GC06M099643 ENSG00000199303 MCHR2-AS1
GH06G099810 0.6 ENCODE 0.1 -182.7 -182703 1.0 SREBF1 MAZ SCRT2 TEAD4 CEBPB CEBPG RPS3P5 USP45 GC06M099643 ENSG00000199303 MCHR2-AS1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MCHR2-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for MCHR2-AS1 Gene

Chromosome:
6
Start:
99,993,944 bp from pter
End:
100,076,419 bp from pter
Size:
82,476 bases
Orientation:
Plus strand

Genomic View for MCHR2-AS1 Gene

Genes around MCHR2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MCHR2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MCHR2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MCHR2-AS1 Gene

Proteins for MCHR2-AS1 Gene

Post-translational modifications for MCHR2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MCHR2-AS1 Gene

Domains & Families for MCHR2-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MCHR2-AS1 Gene

Function for MCHR2-AS1 Gene

Phenotypes for MCHR2-AS1 Gene

GenomeRNAi human phenotypes for MCHR2-AS1:
genes like me logo Genes that share phenotypes with MCHR2-AS1: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MCHR2-AS1 Gene

Localization for MCHR2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MCHR2-AS1 Gene

Pathways & Interactions for MCHR2-AS1 Gene

SuperPathways for MCHR2-AS1 Gene

No Data Available

Interacting Proteins for MCHR2-AS1 Gene

Gene Ontology (GO) - Biological Process for MCHR2-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MCHR2-AS1 Gene

Drugs & Compounds for MCHR2-AS1 Gene

No Compound Related Data Available

Transcripts for MCHR2-AS1 Gene

mRNA/cDNA for MCHR2-AS1 Gene

(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MCHR2-AS1 Gene

No ASD Table

Relevant External Links for MCHR2-AS1 Gene

GeneLoc Exon Structure for
MCHR2-AS1
ECgene alternative splicing isoforms for
MCHR2-AS1

Expression for MCHR2-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MCHR2-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for MCHR2-AS1 Gene

This gene is overexpressed in Testis (x53.0).
genes like me logo Genes that share expression patterns with MCHR2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MCHR2-AS1 Gene

Orthologs for MCHR2-AS1 Gene

Evolution for MCHR2-AS1 Gene

ENSEMBL:
Gene Tree for MCHR2-AS1 (if available)
TreeFam:
Gene Tree for MCHR2-AS1 (if available)

No data available for Orthologs for MCHR2-AS1 Gene

Paralogs for MCHR2-AS1 Gene

No data available for Paralogs for MCHR2-AS1 Gene

Variants for MCHR2-AS1 Gene

Sequence variations from dbSNP and Humsavar for MCHR2-AS1 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type
rs1000001105 -- 99,994,723(+) ATATG(A/C)CCTCG intron-variant, upstream-variant-2KB
rs1000011515 -- 100,035,808(+) CCGAG(A/G)CTGTG intron-variant
rs1000074928 -- 100,066,319(+) CTTTA(A/T)ATGTT intron-variant
rs1000116874 -- 99,995,154(+) TAAAA(-/TC)TCTCA intron-variant, upstream-variant-2KB
rs1000156107 -- 100,063,308(+) ATTTC(A/G)TATTG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for MCHR2-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv6112n100 CNV gain 25217958
esv2490977 CNV deletion 19546169
esv2662118 CNV deletion 23128226
esv2752086 CNV gain 17911159
esv3576203 CNV gain 25503493
esv3610135 CNV loss 21293372
esv3610136 CNV loss 21293372
nsv1024904 CNV loss 25217958
nsv428151 CNV loss 18775914
nsv507353 OTHER sequence alteration 20534489
nsv524878 CNV loss 19592680
nsv604259 CNV gain 21841781
nsv604260 CNV loss 21841781
nsv970154 CNV duplication 23825009

Relevant External Links for MCHR2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MCHR2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MCHR2-AS1 Gene

Disorders for MCHR2-AS1 Gene

Relevant External Links for MCHR2-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MCHR2-AS1

No disorders were found for MCHR2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MCHR2-AS1 Gene

Publications for MCHR2-AS1 Gene

  1. Influence of MCHR2 and MCHR2-AS1 Genetic Polymorphisms on Body Mass Index in Psychiatric Patients and In Population-Based Subjects with Present or Past Atypical Depression. (PMID: 26461262) DelacrActaz A. … Eap C.B. (PLoS ONE 2015) 3 64

Products for MCHR2-AS1 Gene

Sources for MCHR2-AS1 Gene

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