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Aliases for MCF2L-AS1 Gene

Subcategory (RNA class) for MCF2L-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for MCF2L-AS1 Gene

  • MCF2L Antisense RNA 1 2 3 5
  • MCF2L Antisense RNA 1 (Non-Protein Coding) 2

External Ids for MCF2L-AS1 Gene

Previous GeneCards Identifiers for MCF2L-AS1 Gene

  • GC13M113623

Summaries for MCF2L-AS1 Gene

GeneCards Summary for MCF2L-AS1 Gene

MCF2L-AS1 (MCF2L Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MCF2L-AS1 Gene

Genomics for MCF2L-AS1 Gene

Regulatory Elements for MCF2L-AS1 Gene

Enhancers for MCF2L-AS1 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around MCF2L-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for MCF2L-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around MCF2L-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for MCF2L-AS1 Gene

Chromosome:
13
Start:
112,967,484 bp from pter
End:
112,968,824 bp from pter
Size:
1,341 bases
Orientation:
Minus strand

Genomic View for MCF2L-AS1 Gene

Genes around MCF2L-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MCF2L-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MCF2L-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MCF2L-AS1 Gene

Proteins for MCF2L-AS1 Gene

Post-translational modifications for MCF2L-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MCF2L-AS1 Gene

Domains & Families for MCF2L-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MCF2L-AS1 Gene

Function for MCF2L-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MCF2L-AS1 Gene

Localization for MCF2L-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MCF2L-AS1 Gene

Pathways & Interactions for MCF2L-AS1 Gene

SuperPathways for MCF2L-AS1 Gene

No Data Available

Interacting Proteins for MCF2L-AS1 Gene

Gene Ontology (GO) - Biological Process for MCF2L-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MCF2L-AS1 Gene

Drugs & Compounds for MCF2L-AS1 Gene

No Compound Related Data Available

Transcripts for MCF2L-AS1 Gene

mRNA/cDNA for MCF2L-AS1 Gene

(4) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MCF2L-AS1 Gene

MCF2L antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MCF2L-AS1 Gene

No ASD Table

Relevant External Links for MCF2L-AS1 Gene

GeneLoc Exon Structure for
MCF2L-AS1
ECgene alternative splicing isoforms for
MCF2L-AS1

Expression for MCF2L-AS1 Gene

mRNA expression in normal human tissues for MCF2L-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for MCF2L-AS1 Gene

This gene is overexpressed in Pituitary (x5.2).

SOURCE GeneReport for Unigene cluster for MCF2L-AS1 Gene Hs.667436

genes like me logo Genes that share expression patterns with MCF2L-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for MCF2L-AS1 Gene

Orthologs for MCF2L-AS1 Gene

Evolution for MCF2L-AS1 Gene

ENSEMBL:
Gene Tree for MCF2L-AS1 (if available)
TreeFam:
Gene Tree for MCF2L-AS1 (if available)

No data available for Orthologs for MCF2L-AS1 Gene

Paralogs for MCF2L-AS1 Gene

No data available for Paralogs for MCF2L-AS1 Gene

Variants for MCF2L-AS1 Gene

Structural Variations from Database of Genomic Variants (DGV) for MCF2L-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv596e1 CNV Complex 17122850
nsv428291 CNV Loss 18775914
nsv901039 CNV Loss 21882294
nsv832723 CNV Loss 17160897
essv1950 CNV CNV 17122850
dgv1797n71 CNV Loss 21882294
nsv509519 CNV Insertion 20534489
nsv901043 CNV Loss 21882294
nsv901045 CNV Loss 21882294
dgv1798n71 CNV Loss 21882294

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Variation tolerance and Relevant External Links for MCF2L-AS1 Gene

Disorders for MCF2L-AS1 Gene

Relevant External Links for MCF2L-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MCF2L-AS1

No disorders were found for MCF2L-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MCF2L-AS1 Gene

Publications for MCF2L-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 67
  2. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3

Products for MCF2L-AS1 Gene

Sources for MCF2L-AS1 Gene

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