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Aliases for MCCC1-AS1 Gene

Subcategory (RNA class) for MCCC1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for MCCC1-AS1 Gene

  • MCCC1 Antisense RNA 1 2 3 5
  • MCCC1 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for MCCC1-AS1 Gene

Previous GeneCards Identifiers for MCCC1-AS1 Gene

  • GC00U933013
  • GC03P182735

Summaries for MCCC1-AS1 Gene

GeneCards Summary for MCCC1-AS1 Gene

MCCC1-AS1 (MCCC1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for MCCC1-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MCCC1-AS1 Gene

Genomics for MCCC1-AS1 Gene

GeneHancer (GH) Regulatory Elements for MCCC1-AS1 Gene

Promoters and enhancers for MCCC1-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I182212 Enhancer 1.2 Ensembl ENCODE 25.2 -803.5 -803469 1.5 FOXA2 ARID4B SIN3A FEZF1 ZNF2 ETS1 GLIS2 ATF7 FOS MIER2 MCCC1-AS1 DCUN1D1 GC03P182238 LOC105374243
GH03I183634 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 13.6 +620.4 620391 3.5 PKNOX1 CLOCK FOXA2 SMAD1 ARID4B SIN3A DMAP1 YY1 SLC30A9 POLR2B KLHL24 POLR2H YEATS2 DVL3 MCCC1-AS1 PARL RPS3P3 EIF2B5 KLHL6
GH03I183284 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 13.7 +270.1 270080 4.3 HDGF PKNOX1 ZFP64 SIN3A FEZF1 IRF4 YY1 ZNF766 ZNF143 FOS B3GNT5 DVL3 MCCC1-AS1 PARL RNA5SP151 RPS3P3 EIF2B5 MCCC1 KLHL6 ATP11B
GH03I182730 Enhancer 0.8 Ensembl dbSUPER 13.1 -285.7 -285654 0.4 RB1 NR2F1 ZBED1 ZNF140 JUNB ATF2 ZNF217 POLR2A CEBPA IKZF1 ENSG00000260377 MCCC1-AS1 ATP11B LOC105374245 PIR51566
GH03I182948 Enhancer 0.7 ENCODE 13.8 -67.7 -67747 0.2 HDAC1 USF1 NFATC3 ZNF507 CHAMP1 FOXK2 PHF20 ADNP CBFA2T2 ZNF639 MCCC1-AS1 PARL LOC100505642 ENSG00000273261 DCUN1D1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MCCC1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MCCC1-AS1 Gene

Genomic Locations for MCCC1-AS1 Gene
chr3:183,016,255-183,017,808
(GRCh38/hg38)
Size:
1,554 bases
Orientation:
Plus strand
chr3:182,734,043-182,735,596
(GRCh37/hg19)

Genomic View for MCCC1-AS1 Gene

Genes around MCCC1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MCCC1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MCCC1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for MCCC1-AS1 Gene

Proteins for MCCC1-AS1 Gene

Post-translational modifications for MCCC1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MCCC1-AS1 Gene

Domains & Families for MCCC1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MCCC1-AS1 Gene

Function for MCCC1-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MCCC1-AS1 Gene

Localization for MCCC1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MCCC1-AS1 Gene

Pathways & Interactions for MCCC1-AS1 Gene

SuperPathways for MCCC1-AS1 Gene

No Data Available

Interacting Proteins for MCCC1-AS1 Gene

Gene Ontology (GO) - Biological Process for MCCC1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MCCC1-AS1 Gene

Drugs & Compounds for MCCC1-AS1 Gene

No Compound Related Data Available

Transcripts for MCCC1-AS1 Gene

mRNA/cDNA for MCCC1-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MCCC1-AS1 Gene

No ASD Table

Relevant External Links for MCCC1-AS1 Gene

GeneLoc Exon Structure for
MCCC1-AS1
ECgene alternative splicing isoforms for
MCCC1-AS1

Expression for MCCC1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MCCC1-AS1 Gene

genes like me logo Genes that share expression patterns with MCCC1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MCCC1-AS1 Gene

Orthologs for MCCC1-AS1 Gene

Evolution for MCCC1-AS1 Gene

ENSEMBL:
Gene Tree for MCCC1-AS1 (if available)
TreeFam:
Gene Tree for MCCC1-AS1 (if available)

No data available for Orthologs for MCCC1-AS1 Gene

Paralogs for MCCC1-AS1 Gene

No data available for Paralogs for MCCC1-AS1 Gene

Variants for MCCC1-AS1 Gene

Additional Variant Information for MCCC1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MCCC1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MCCC1-AS1 Gene

Disorders for MCCC1-AS1 Gene

No disorders were found for MCCC1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for MCCC1-AS1 Gene

Publications for MCCC1-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58

Products for MCCC1-AS1 Gene

Sources for MCCC1-AS1 Gene

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