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Aliases for MBNL1-AS1 Gene

Subcategory (RNA class) for MBNL1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for MBNL1-AS1 Gene

  • MBNL1 Antisense RNA 1 2 3 5

External Ids for MBNL1-AS1 Gene

Previous GeneCards Identifiers for MBNL1-AS1 Gene

  • GC03M151982

Summaries for MBNL1-AS1 Gene

GeneCards Summary for MBNL1-AS1 Gene

MBNL1-AS1 (MBNL1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for MBNL1-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MBNL1-AS1 Gene

Genomics for MBNL1-AS1 Gene

GeneHancer (GH) Regulatory Elements for MBNL1-AS1 Gene

Promoters and enhancers for MBNL1-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I152265 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 557.1 -2.0 -1984 12.3 PKNOX1 FOXA2 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 POLR2B MBNL1-AS1 MBNL1 LOC105374163 ENSG00000201217 TMEM14EP LOC105374162
GH03I152297 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 16.6 -29.7 -29711 2.9 PKNOX1 CLOCK ATF1 FOXA2 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 MBNL1 TMEM14EP MBNL1-AS1 LOC105374163 ENSG00000201217 LOC105374162
GH03I152240 Promoter/Enhancer 1.7 Ensembl ENCODE dbSUPER 17.1 +25.8 25836 6.4 FOXA2 PKNOX1 ATF1 ARNT FEZF1 IRF4 YY1 NCOA2 GTF3C2 TCF12 MBNL1 MBNL1-AS1 LOC101928166
GH03I152314 Enhancer 1.4 Ensembl ENCODE dbSUPER 16.1 -50.0 -50038 9.9 PKNOX1 SMAD1 ATF1 FOXA2 ARNT YY1 NCOA2 TCF12 GATA2 FOS TMEM14EP MBNL1-AS1 MBNL1 LOC105374162 GC03M152329
GH03I152195 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 12.9 +68.6 68613 10.4 HDGF PKNOX1 FOXA2 IRF4 YY1 NCOA2 ZNF766 ARID2 ATF7 RUNX3 MBNL1 MBNL1-AS1 AADACL2 LOC101928166 GC03P152194
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MBNL1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MBNL1-AS1 Gene

Genomic Locations for MBNL1-AS1 Gene
chr3:152,262,616-152,269,626
(GRCh38/hg38)
Size:
7,011 bases
Orientation:
Minus strand
chr3:151,980,405-151,987,415
(GRCh37/hg19)

Genomic View for MBNL1-AS1 Gene

Genes around MBNL1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MBNL1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MBNL1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MBNL1-AS1 Gene

Proteins for MBNL1-AS1 Gene

Post-translational modifications for MBNL1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MBNL1-AS1 Gene

Domains & Families for MBNL1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MBNL1-AS1 Gene

Function for MBNL1-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MBNL1-AS1 Gene

Localization for MBNL1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MBNL1-AS1 Gene

Pathways & Interactions for MBNL1-AS1 Gene

SuperPathways for MBNL1-AS1 Gene

No Data Available

Interacting Proteins for MBNL1-AS1 Gene

Gene Ontology (GO) - Biological Process for MBNL1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MBNL1-AS1 Gene

Drugs & Compounds for MBNL1-AS1 Gene

No Compound Related Data Available

Transcripts for MBNL1-AS1 Gene

mRNA/cDNA for MBNL1-AS1 Gene

Unigene Clusters for MBNL1-AS1 Gene

MBNL1 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MBNL1-AS1 Gene

No ASD Table

Relevant External Links for MBNL1-AS1 Gene

GeneLoc Exon Structure for
MBNL1-AS1
ECgene alternative splicing isoforms for
MBNL1-AS1

Expression for MBNL1-AS1 Gene

SOURCE GeneReport for Unigene cluster for MBNL1-AS1 Gene:

Hs.725347
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MBNL1-AS1 Gene

Orthologs for MBNL1-AS1 Gene

Evolution for MBNL1-AS1 Gene

ENSEMBL:
Gene Tree for MBNL1-AS1 (if available)
TreeFam:
Gene Tree for MBNL1-AS1 (if available)

No data available for Orthologs for MBNL1-AS1 Gene

Paralogs for MBNL1-AS1 Gene

No data available for Paralogs for MBNL1-AS1 Gene

Variants for MBNL1-AS1 Gene

Sequence variations from dbSNP and Humsavar for MBNL1-AS1 Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs17433672 benign, not specified 152,268,473(-) C/T non_coding_transcript_variant
rs1000134133 -- 152,265,039(-) T/C non_coding_transcript_variant
rs1000459920 -- 152,264,652(-) A/G non_coding_transcript_variant
rs1000940029 -- 152,270,397(-) C/T upstream_transcript_variant
rs1001010854 -- 152,269,957(-) G/A upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MBNL1-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv954493 CNV duplication 24416366

Additional Variant Information for MBNL1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MBNL1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MBNL1-AS1 Gene

Disorders for MBNL1-AS1 Gene

Additional Disease Information for MBNL1-AS1

No disorders were found for MBNL1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MBNL1-AS1 Gene

Publications for MBNL1-AS1 Gene

  1. Differentially Expressed lncRNAs in Gastric Cancer Patients: A Potential Biomarker for Gastric Cancer Prognosis. (PMID: 28900495) Tian X … Fang JY (Journal of Cancer 2017) 2 3 58
  2. Transcriptome analysis of human gastric cancer. (PMID: 16341674) Oh JH … Kim NS (Mammalian genome : official journal of the International Mammalian Genome Society 2005) 3 58
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58
  4. The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3 58

Products for MBNL1-AS1 Gene

Sources for MBNL1-AS1 Gene

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