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Aliases for MBNL1-AS1 Gene

Subcategory (RNA class) for MBNL1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for MBNL1-AS1 Gene

  • MBNL1 Antisense RNA 1 2 3 5

External Ids for MBNL1-AS1 Gene

Previous GeneCards Identifiers for MBNL1-AS1 Gene

  • GC03M151982

Summaries for MBNL1-AS1 Gene

GeneCards Summary for MBNL1-AS1 Gene

MBNL1-AS1 (MBNL1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MBNL1-AS1 Gene

Genomics for MBNL1-AS1 Gene

Regulatory Elements for MBNL1-AS1 Gene

Enhancers for MBNL1-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F152240 0.8 ENCODE 17 +25.8 25836 6.4 PKNOX1 ATF1 FEZF1 GTF3C2 ELK1 TBX21 CREB3 SMARCA4 PBX2 STAT3 MBNL1-AS1 MBNL1 LOC101928166
GH03F152297 0.8 ENCODE 16.6 -29.7 -29712 2.9 ATF1 PKNOX1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 GATA2 ZNF143 TMEM14EP MBNL1-AS1 MBNL1 LOC105374162
GH03F152314 0.9 Ensembl ENCODE 16 -50.1 -50121 10.1 PKNOX1 ATF1 ARNT YY1 CBX5 GATA2 ZNF143 FOS JUNB NCOA1 TMEM14EP MBNL1-AS1 MBNL1 LOC105374162 GC03M152329
GH03F152191 1 FANTOM5 Ensembl ENCODE 12.9 +70.2 70188 15.1 HDGF PKNOX1 ZNF133 YY1 CBX5 FOS GTF2B JUNB REST TBX21 MBNL1 LOC105374163 MBNL1-AS1 ENSG00000201217 AADACL2 GC03P152194 LOC101928166
GH03F152175 1.1 Ensembl ENCODE 12.5 +93.2 93226 2.8 ATF1 JUN RAD21 RFX5 GATA2 ELK1 RCOR1 FOS TCF7L2 SMARCE1 MBNL1 MBNL1-AS1 TMEM14EP GC03P152194 LOC105374161
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around MBNL1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for MBNL1-AS1 Gene

Chromosome:
3
Start:
152,262,616 bp from pter
End:
152,269,626 bp from pter
Size:
7,011 bases
Orientation:
Minus strand

Genomic View for MBNL1-AS1 Gene

Genes around MBNL1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MBNL1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MBNL1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MBNL1-AS1 Gene

Proteins for MBNL1-AS1 Gene

Post-translational modifications for MBNL1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MBNL1-AS1 Gene

Domains & Families for MBNL1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MBNL1-AS1 Gene

Function for MBNL1-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MBNL1-AS1 Gene

Localization for MBNL1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MBNL1-AS1 Gene

Pathways & Interactions for MBNL1-AS1 Gene

SuperPathways for MBNL1-AS1 Gene

No Data Available

Interacting Proteins for MBNL1-AS1 Gene

Gene Ontology (GO) - Biological Process for MBNL1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MBNL1-AS1 Gene

Transcripts for MBNL1-AS1 Gene

mRNA/cDNA for MBNL1-AS1 Gene

Unigene Clusters for MBNL1-AS1 Gene

MBNL1 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MBNL1-AS1 Gene

No ASD Table

Relevant External Links for MBNL1-AS1 Gene

GeneLoc Exon Structure for
MBNL1-AS1
ECgene alternative splicing isoforms for
MBNL1-AS1

Expression for MBNL1-AS1 Gene

SOURCE GeneReport for Unigene cluster for MBNL1-AS1 Gene:

Hs.725347
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MBNL1-AS1 Gene

Orthologs for MBNL1-AS1 Gene

Evolution for MBNL1-AS1 Gene

ENSEMBL:
Gene Tree for MBNL1-AS1 (if available)
TreeFam:
Gene Tree for MBNL1-AS1 (if available)

No data available for Orthologs for MBNL1-AS1 Gene

Paralogs for MBNL1-AS1 Gene

No data available for Paralogs for MBNL1-AS1 Gene

Variants for MBNL1-AS1 Gene

Sequence variations from dbSNP and Humsavar for MBNL1-AS1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs17433672 Benign 152,268,473(+) CTTGC(C/T)GGCTT intron-variant, nc-transcript-variant, upstream-variant-2KB, utr-variant-5-prime
rs10664067 -- 152,265,423(+) TGTGT(-/GT/GTG/GTGA/GTGT)CAGGA intron-variant, nc-transcript-variant
rs111816082 -- 152,269,502(+) GGCTC(C/T)CGCAT intron-variant, nc-transcript-variant
rs112157452 -- 152,264,356(+) AAAAA(A/C)TAGAA intron-variant, nc-transcript-variant
rs112283900 -- 152,269,386(+) GAAAC(-/AG)GGGGG intron-variant, utr-variant-5-prime

Structural Variations from Database of Genomic Variants (DGV) for MBNL1-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv954493 CNV duplication 24416366

Relevant External Links for MBNL1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MBNL1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MBNL1-AS1 Gene

Disorders for MBNL1-AS1 Gene

Relevant External Links for MBNL1-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MBNL1-AS1

No disorders were found for MBNL1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MBNL1-AS1 Gene

Publications for MBNL1-AS1 Gene

  1. Transcriptome analysis of human gastric cancer. (PMID: 16341674) Oh J.H. … Kim N.S. (Mamm. Genome 2005) 3 64
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64
  3. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3 64

Products for MBNL1-AS1 Gene

Sources for MBNL1-AS1 Gene

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