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Aliases for MBL1P Gene

Aliases for MBL1P Gene

  • Mannose Binding Lectin 1, Pseudogene 2 3 5
  • Mannose-Binding Lectin (Protein A) 1, Pseudogene 1 2 3
  • Mannose-Binding Lectin (Protein A) 1, Pseudogene 2
  • COLEC3P 3
  • MBL1P1 3

External Ids for MBL1P Gene

Previous HGNC Symbols for MBL1P Gene

  • MBL1P1

Previous GeneCards Identifiers for MBL1P Gene

  • GC10P081671
  • GC10P081667
  • GC10P081673
  • GC10P075522
  • GC10P081776
  • GC10P080043
  • GC10P080070
  • GC10P080094
  • GC10P080117

Summaries for MBL1P Gene

GeneCards Summary for MBL1P Gene

MBL1P (Mannose Binding Lectin 1, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MBL1P Gene

Genomics for MBL1P Gene

Regulatory Elements for MBL1P Gene

Enhancers for MBL1P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10F079927 1.2 FANTOM5 ENCODE 23.3 +22.4 22420 0.3 ELF3 THRB RAD21 RARA YY1 THAP11 NFYC MIER2 PPARG NR2F2 MBL1P SFTPD-AS1 ZCCHC24 BMS1P21
GH10F080192 0.9 FANTOM5 ENCODE 21.1 +296.4 296380 16.8 HDGF PKNOX1 ARNT CREB3L1 WRNIP1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 MBL1P LINC00857 MAT1A ANXA11 DYDC2 PLAC9 SH2D4B LOC642361 LOC101929574 TSPAN14
GH10F079936 1.1 FANTOM5 Ensembl ENCODE 20.6 +33.7 33690 4.4 MTA2 MAX TBX21 SMARCA4 EGR1 POLR2A ZNF341 EED IKZF1 ETV6 SFTPD MBL1P ANXA11 SFTPA2 CTSLP6 LINC00857 SFTPD-AS1 NUTM2B BMS1P21
GH10F080153 1.1 Ensembl ENCODE 20.4 +256.6 256634 15.4 PKNOX1 ATF1 ARNT CREB3L1 SIN3A FEZF1 ZNF2 GLIS2 FOS ZNF263 LINC00857 MBL1P ANXA11 PLAC9 ENSG00000272489 MAT1A SFTPD TSPAN14 GC10M080155
GH10F080170 0.4 ENCODE 20.4 +267.3 267288 3.5 ZNF263 KLF1 ZNF687 NR2F1 DPF2 ZIC2 E2F1 CTBP1 GATA3 KLF9 LINC00857 MBL1P ANXA11 PLAC9 GC10M080155
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around MBL1P on UCSC Golden Path with GeneCards custom track

Promoters for MBL1P Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000358048 203 1799 ZNF76 ZBTB40 ZNF2 YY1 GLIS2 SCRT2 KLF7 ZNF263 ZNF362 ZBTB11

Genomic Location for MBL1P Gene

Chromosome:
10
Start:
79,904,898 bp from pter
End:
79,950,336 bp from pter
Size:
45,439 bases
Orientation:
Plus strand

Genomic View for MBL1P Gene

Genes around MBL1P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MBL1P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MBL1P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MBL1P Gene

Proteins for MBL1P Gene

Post-translational modifications for MBL1P Gene

No Post-translational modifications

No data available for DME Specific Peptides for MBL1P Gene

Domains & Families for MBL1P Gene

Gene Families for MBL1P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MBL1P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MBL1P Gene

Function for MBL1P Gene

Phenotypes for MBL1P Gene

GenomeRNAi human phenotypes for MBL1P:
genes like me logo Genes that share phenotypes with MBL1P: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MBL1P Gene

Localization for MBL1P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MBL1P Gene

Pathways & Interactions for MBL1P Gene

SuperPathways for MBL1P Gene

No Data Available

Interacting Proteins for MBL1P Gene

Gene Ontology (GO) - Biological Process for MBL1P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MBL1P Gene

Transcripts for MBL1P Gene

mRNA/cDNA for MBL1P Gene

Alternative Splicing Database (ASD) splice patterns (SP) for MBL1P Gene

No ASD Table

Relevant External Links for MBL1P Gene

GeneLoc Exon Structure for
MBL1P
ECgene alternative splicing isoforms for
MBL1P

Expression for MBL1P Gene

mRNA expression in normal human tissues for MBL1P Gene

mRNA differential expression in normal tissues according to GTEx for MBL1P Gene

This gene is overexpressed in Pancreas (x6.9) and Liver (x6.9).

NURSA nuclear receptor signaling pathways regulating expression of MBL1P Gene:

MBL1P
genes like me logo Genes that share expression patterns with MBL1P: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MBL1P Gene

Orthologs for MBL1P Gene

Evolution for MBL1P Gene

ENSEMBL:
Gene Tree for MBL1P (if available)
TreeFam:
Gene Tree for MBL1P (if available)

No data available for Orthologs for MBL1P Gene

Paralogs for MBL1P Gene

No data available for Paralogs for MBL1P Gene

Variants for MBL1P Gene

Sequence variations from dbSNP and Humsavar for MBL1P Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type
rs10400059 -- 79,920,782(+) GGGGA(A/G)CTGGC intron-variant, nc-transcript-variant
rs1054053 -- 79,922,889(+) CGGGC(A/G)GGAGG intron-variant, nc-transcript-variant
rs1054054 -- 79,922,972(+) AACAA(C/T)GGGCT intron-variant, nc-transcript-variant
rs114336803 -- 79,919,826(+) CCTCA(A/G)GTCTC intron-variant, upstream-variant-2KB
rs114474979 -- 79,919,687(+) AGTAA(C/G)TGAAC intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MBL1P Gene

Variant ID Type Subtype PubMed ID
dgv941n100 CNV gain 25217958
esv3623930 CNV loss 21293372
esv3623931 CNV gain 21293372
nsv1141879 OTHER inversion 24896259
nsv467391 CNV gain 19166990
nsv551632 CNV gain 21841781
nsv831922 CNV loss 17160897

Relevant External Links for MBL1P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MBL1P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MBL1P Gene

Disorders for MBL1P Gene

Relevant External Links for MBL1P

Human Genome Epidemiology (HuGE) Navigator
MBL1P
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MBL1P

No disorders were found for MBL1P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MBL1P Gene

Publications for MBL1P Gene

  1. The 'involution' of mannose-binding lectin. (PMID: 16115813) Seyfarth J. … Madsen H.O. (Hum. Mol. Genet. 2005) 3 22 64
  2. The human ortholog of rhesus mannose-binding protein-A gene is an expressed pseudogene that localizes to chromosome 10. (PMID: 9501312) Guo N. … Sastry K.N. (Mamm. Genome 1998) 2 3 64
  3. Association of mannose binding lectin codon 54 polymorphism with predisposition to Henoch-SchAPnlein purpura in childhood. (PMID: 24576294) Durmaz B. … Ozkinay F. (Int J Rheum Dis 2014) 3 64
  4. Mannose-binding lectin gene polymorphisms and mycobacterial lymphadenitis in young patients. (PMID: 24008740) You H.L. … Eng H.L. (Pediatr. Infect. Dis. J. 2013) 3 64
  5. MBL1 gene in nonhuman primates. (PMID: 21889966) Segat L. … Crovella S. (Hum. Immunol. 2011) 3 64

Products for MBL1P Gene

Sources for MBL1P Gene

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