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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

MAVS Gene

protein-coding   GIFtS: 59
GCID: GC20P003827

mitochondrial antiviral signaling protein

 Explore 13 diseases affiliated with
MAVS via our new
 Human Malady Compendium 
Biological research products
for MAVS
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

This gene clusters with an RNA gene
Subcategory (RNA class): lncRNA

Quality score for the ORGUL clustered with this gene is 3

Aliases
Mitochondrial Antiviral Signaling Protein1 2     Virus-Induced-Signaling Adapter2 3
VISA1 2 3 5     CARD Adapter Inducing Interferon Beta2 3
IPS-11 2 3     CARDIF2 5
KIAA12711 3 5     CARD Adaptor Inducing IFN-Beta2
IPS12 3 5     IFN-B Promoter Stimulator 12
Cardif1 3     Mitochondrial Antiviral-Signaling Protein2
Interferon Beta Promoter Stimulator Protein 12 3     Virus-Induced Signaling Adaptor2
Putative NF-Kappa-B-Activating Protein 031N2 3     

External Ids:    HGNC: 292331   Entrez Gene: 575062   Ensembl: ENSG000000888887   OMIM: 6096765   UniProtKB: Q7Z4343   
ORGUL members:         
NONCODE:n410672    

Export aliases for MAVS gene to outside databases

Previous GC identifers: GC20P003783 GC20P003784


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for MAVS:
This gene encodes an intermediary protein necessary in the virus-triggered beta interferon signaling pathways. It is
required for activation of transcription factors which regulate expression of beta interferon and contributes to
antiviral immunity. Multiple transcript variants encoding different isoforms have been found for this gene. (provided
by RefSeq, Sep 2011)

UniProtKB/Swiss-Prot: MAVS_HUMAN, Q7Z434
Function: Required for innate immune defense against viruses. Acts downstream of DDX58/RIG-I and IFIH1/MDA5, which
detect intracellular dsRNA produced during viral replication, to coordinate pathways leading to the activation of
NF-kappa-B, IRF3 and IRF7, and to the subsequent induction of antiviral cytokines such as IFN-beta and RANTES (CCL5).
Peroxisomal and mitochondrial MAVS act sequentially to create an antiviral cellular state. Upon viral infection,
peroxisomal MAVS induces the rapid interferon-independent expression of defense factors that provide short-term
protection, whereas mitochondrial MAVS activates an interferon-dependent signaling pathway with delayed kinetics,
which amplifies and stabilizes the antiviral response. May activate the same pathways following detection of
extracellular dsRNA by TLR3. May protect cells from apoptosis

Gene Wiki entry for MAVS (VISA)


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000020.10  NC_018931.1  NT_011387.8  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the MAVS gene promoter:
         c-Fos   RFX1   AP-1   JunB   FosB   Fra-1   JunD   FOXJ2 (long isoform)   FOXJ2   c-Jun   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidMAVS promoter sequence
   Search SABiosciences Chromatin IP Primers for MAVS

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat MAVS


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 20p13   Ensembl cytogenetic band:  20p13   HGNC cytogenetic band: 20p13

MAVS Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
MAVS gene location

GeneLoc information about chromosome 20         GeneLoc Exon Structure

GeneLoc location for GC20P003827:  view genomic region     (about GC identifiers)

Start:
3,827,449 bp from pter      End:
3,856,762 bp from pter
Size:
29,314 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: MAVS_HUMAN, Q7Z434 (See protein sequence)
Recommended Name: Mitochondrial antiviral-signaling protein  
Size: 540 amino acids; 56528 Da
Subunit: Interacts with DDX58/RIG-I, IFIH1/MDA5, TRAF2, TRAF6 and C1QBP. May interact with IRF3, FADD, RIPK1, CHUK and
IKBKB. Interacts with and is cleaved by HCV and hepatitis GB virus B NS3/4A proteases. Interacts with and is cleaved
by HHAV protein 3ABC. Interacts with NLRX1. Interaction with NLRX1 requires the CARD domain. Interacts with PSMA7.
Interacts with TRAFD1 (By similarity). Interacts (via C-terminus) with PCBP2 in a complex containing MAVS/IPS1, PCBP2
and ITCH. Interacts with CYLD. Interacts with SRC. Interacts with DHX58/LGP2 and IKBKE. Interacts with TMEM173/MITA.
Interacts with IFIT3 (via N-terminus). Interacts with TBK1 only in the presence of IFIT3
Subcellular location: Mitochondrion outer membrane. Mitochondrion. Peroxisome
Miscellaneous: Cleavage by HCV protease complex leads to inactivation
Sequence caution: Sequence=BAA86585.1; Type=Erroneous initiation; Note=Translation N-terminally shortened;
Sequence=BAB14684.1; Type=Frameshift; Positions=333;
1 PDB 3D structure from and Proteopedia for MAVS:
2VGQ (3D)    
Secondary accessions: A8K6X0 F5H6C8 Q2HWT5 Q3I0Y2 Q5T7I6 Q86VY7 Q9H1H3 Q9H4Y1 Q9H8D3 Q9ULE9
Alternative splicing: 4 isoforms:  Q7Z434-1   Q7Z434-2   Q7Z434-3   Q7Z434-4   (No experimental confirmation available)

Explore the universe of human proteins at neXtProt for MAVS: NX_Q7Z434

Post-translational modifications:

  • Ubiquitinated; undergoes 'Lys-48'-linked polyubiquitination catalyzed by ITCH; ITCH-dependent polyubiquitination is
  • mediated by the interaction with PCBP2 and leads to MAVS/IPS1 proteasomal degradation1
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q7Z434

  • MAVS Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins (2 alternative transcripts): 
    NP_001193420.1  NP_065797.2  

    ENSEMBL proteins: 
     ENSP00000401980   ENSP00000350852   ENSP00000413749  
    Reactome Protein details: Q7Z434
    Human Recombinant Protein Products: 
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    Novus Biologicals MAVS Proteins
    Novus Biologicals MAVS Lysates
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for MAVS

    Gene Ontology (GO): 5 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005739mitochondrion ----
    GO:0005741mitochondrial outer membrane TAS--
    GO:0005778peroxisomal membrane IDA--
    GO:0016021integral to membrane IEA--
    GO:0031966mitochondrial membrane IDA--


    MAVS for ontologies           About GeneDecksing



    MAVS Antibody Products: 
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    Uscn ELISAs and CLIAs for MAVS


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    MAVS for domains           About GeneDecksing

    1 InterPro domain/family:
     IPR026148 Mt_antiviral_sig_pro

    Graphical View of Domain Structure for InterPro Entry Q7Z434

    ProtoNet protein and cluster: Q7Z434

    UniProtKB/Swiss-Prot: MAVS_HUMAN, Q7Z434
    Domain: Both CARD and transmembrane domains are essential for antiviral function. The CARD domain is responsible for
    interaction with DDX58/RIG-I and IFIH1/MDA5
    Domain: The transmembrane domain and residues 300-444 are essential for its interaction with DHX58/LGP2
    Similarity: Contains 1 CARD domain


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: MAVS_HUMAN, Q7Z434
    Function: Required for innate immune defense against viruses. Acts downstream of DDX58/RIG-I and IFIH1/MDA5, which
    detect intracellular dsRNA produced during viral replication, to coordinate pathways leading to the activation of
    NF-kappa-B, IRF3 and IRF7, and to the subsequent induction of antiviral cytokines such as IFN-beta and RANTES (CCL5).
    Peroxisomal and mitochondrial MAVS act sequentially to create an antiviral cellular state. Upon viral infection,
    peroxisomal MAVS induces the rapid interferon-independent expression of defense factors that provide short-term
    protection, whereas mitochondrial MAVS activates an interferon-dependent signaling pathway with delayed kinetics,
    which amplifies and stabilizes the antiviral response. May activate the same pathways following detection of
    extracellular dsRNA by TLR3. May protect cells from apoptosis

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    8/29 QIAGEN miScript miRNA Assays for microRNAs that regulate MAVS (see all 29):
    hsa-miR-3678-3p hsa-miR-125a-5p hsa-miR-300 hsa-miR-4328 hsa-miR-330-5p hsa-miR-125a-3p hsa-miR-539 hsa-miR-488
    SwitchGear 3'UTR luciferase reporter plasmidMAVS 3' UTR sequence
    Inhib. RNA
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    Gene Ontology (GO): 4 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004871signal transducer activity IMP--
    GO:0005515protein binding IPI16127453
    GO:0019901protein kinase binding IPI16127453
    GO:0050700CARD domain binding IPI16127453


    MAVS for ontologies           About GeneDecksing


    Animal Models:
         Mouse knock-outs for MAVS: Mavstm1Camb Mavstm1Aki Mavstm1Itl Mavstm1Tsc Mavstm1Zjc
         11 MGI mutant phenotypes (inferred from 5 alleles(MGI details for Mavs):
     cardiovascular system  cellular  digestive/alimentary  hematopoietic system  homeostasis/metabolism 
     immune system  integument  mortality/aging  muscle  nervous system 
     respiratory system 

    MAVS for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/9 super-pathways (see all 9About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1RIG-I/MDA5 mediated induction of IFN-alpha/beta pathways
    RIG-I/MDA5 mediated induction of IFN-alpha/beta pathways1.00
    Negative regulators of RIG-I/MDA5 signaling0.49
    RIG-I-like receptor signaling pathway0.52
    2Immune System
    Immune System1.00
    Innate Immune System0.46
    3Negative regulation of RIG-I/MDA5 signaling by TRIAD3A
    Negative regulation of RIG-I/MDA5 signaling by TRIAD3A1.00
    Negative regulation of RIG-I/MDA5 signaling by DUBA0.91
    4Measles
    Measles1.00
    Influenza A0.35
    5RIP-mediated NFkB activation via DAI
    TRAF6 mediated NF-kB activation0.42
    NF-kB activation through FADD/RIP-1 pathway mediated by caspase-8 and -100.21

    Pathway sources
    See GeneCards unified pathways
    Show all pathways


    1 Cell Signaling Technology (CST) Pathway for MAVS
        NF-kappaB Signaling

    5/10        Reactome Pathways for MAVS (see all 10)
        NF-kB activation through FADD/RIP-1 pathway mediated by caspase-8 and -10
    RIG-I/MDA5 mediated induction of IFN-alpha/beta pathways
    TRAF3-dependent IRF activation pathway
    TRAF6 mediated IRF7 activation
    TRAF6 mediated NF-kB activation


    5         Kegg Pathways  (Kegg details for MAVS):
        RIG-I-like receptor signaling pathway
    Cytosolic DNA-sensing pathway
    Hepatitis C
    Measles
    Influenza A


    MAVS for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for MAVS

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/81 Interacting proteins for MAVS (Q7Z4341, 2, 3 ENSP000004019804) via UniProtKB, MINT, STRING, and/or I2D (see all 81)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    ABL1P005192, 3, ENSP000003614234MINT-7297542 MINT-7297557 MINT-7297574 MINT-7297526 MINT-7297498 MINT-7297511 I2D: score=2 STRING: ENSP00000361423
    MFN1Q8IWA42, 3, ENSP000002639694MINT-7714001 MINT-7713992 I2D: score=2 STRING: ENSP00000263969
    CYLDQ9NQC72, 3, ENSP000003089284MINT-6804603 I2D: score=2 STRING: ENSP00000308928
    IRF5Q135681, 3, ENSP000003497704EBI-995373,EBI-3931258 I2D: score=1 STRING: ENSP00000349770
    STAT1P422241, 3, ENSP000003543944EBI-995373,EBI-1057697 I2D: score=1 STRING: ENSP00000354394
    About this table

    Gene Ontology (GO): 5/25 biological process terms (GO ID links to tree view) (see all 25):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0001934positive regulation of protein phosphorylation IDA16127453
    GO:0002218activation of innate immune response IMP18818105
    GO:0002230positive regulation of defense response to virus by host IMP19609254
    GO:0007165signal transduction IMP--
    GO:0019048virus-host interaction IEA--


    MAVS for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for MAVS
    Search CenterWatch for drugs/clinical trials and news about MAVS 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for MAVS gene (2 alternative transcripts): 
    NM_001206491.1  NM_020746.4  

    Unigene Cluster for MAVS:

    Mitochondrial antiviral signaling protein
    Hs.570362  [show with all ESTs]
    Unigene Representative Sequence: NM_020746
    3 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000428216(uc002wjv.3 uc002wjx.4 uc002wjw.4 uc002wjy.4)
    ENST00000358134 ENST00000416600

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    hsa-miR-3678-3p hsa-miR-125a-5p hsa-miR-300 hsa-miR-4328 hsa-miR-330-5p hsa-miR-125a-3p hsa-miR-539 hsa-miR-488
    SwitchGear 3'UTR luciferase reporter plasmidMAVS 3' UTR sequence
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    Additional cDNA sequence: 

    AB033097.1 AB097003.1 AB232371.1 AK023799.1 AK056260.1 AK092705.1 AK095370.1 AK123956.1 
    AK130992.1 AK291785.1 AK296897.1 AL390136.1 BC000073.2 BC028962.1 BC040719.1 BC040930.1 
    BC044952.1 BC052583.1 BC062310.1 BC063593.1 BX649084.1 DQ167126.1 DQ174270.1 DQ181928.1 
    EF467323.1 EF467324.1 NR_037921.1 

    17 DOTS entries:

    DT.406159  DT.40199115  DT.121644534  DT.101980187  DT.100778842  DT.120824788  DT.99932965  DT.86846786 
    DT.92420181  DT.97823592  DT.100778843  DT.111458  DT.100778841  DT.75101330  DT.92032322  DT.92422048 
    DT.92013360 

    24/331 AceView cDNA sequences (see all 331):

    AI123632 AI925632 BX504554 BX421695 BG390580 AI244131 BQ050901 AW298312 
    BM562790 AW298314 BI007397 BM789127 BU956892 CB055222 CR613265 AI092229 
    AA948202 AA558474 AL135056 BC052583 BM827165 BX356271 BU185620 BI334883 

    GeneLoc Exon Structure

    5/7 Alternative Splicing Database (ASD) splice patterns (SP) for MAVS (see all 7)    About this scheme

    ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5a · 5b ^ 6 ^ 7 ^ 8a · 8b · 8c ^ 9 ^ 10
    SP1:        -                       -                                             
    SP2:        -           -           -                                             
    SP3:                    -           -                                             
    SP4:        -           -     -     -                                             
    SP5:        -           -     -     -     -                                       


    ECgene alternative splicing isoforms for MAVS

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    MAVS expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: AGAGGCAGAG

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See MAVS Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for MAVS

    SOURCE GeneReport for Unigene cluster: Hs.570362

    UniProtKB/Swiss-Prot: MAVS_HUMAN, Q7Z434
    Tissue specificity: Present in T-cells, monocytes, epithelial cells and hepatocytes (at protein level). Ubiquitously
    expressed, with highest levels in heart, skeletal muscle, liver, placenta and peripheral blood leukocytes

        SABiosciences Expression via Pathway-Focused PCR Array including MAVS: 
              Antiviral Response in human mouse rat

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    In Situ
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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of chordates.

    Orthologs for MAVS gene from 3/8 species (see all 8)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Mavs1 , 5 mitochondrial antiviral signaling protein1, 5 68.75(n)1
    55.13(a)1
      2 (63.30 cM)5
    2286071  NM_144888.21  NP_659137.11 
     1312340635 
    chicken
    (Gallus gallus)
    Aves LOC4229366
    hypothetical protein LOC422936
    20(a)
    1 ↔ 1
    4(91915663-91923620)
    zebrafish
    (Danio rerio)
    Actinopterygii mavs6
    mitochondrial antiviral signaling protein
    16(a)
    1 ↔ 1
    13(15136148-15167556)


    ENSEMBL Gene Tree for MAVS (if available)
    TreeFam Gene Tree for MAVS (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
      --

    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/675 NCBI SNPs in MAVS are shown (see all 675    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 20 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1116234231,2
    C,--3825533(+) CAAAC-/AAAAAA 3 -- us2k11Minor allele frequency- A:0.50CSA 2
    rs735723491,2
    C,--3825560(+) GTCACC/TGAGTA 3 -- us2k12Minor allele frequency- T:0.21WA 120
    rs1476546301,2
    --3825629(+) TGGCTC/TACGCC 3 -- us2k10--------
    rs790614581,2
    C,--3825631(+) GCTCAC/TGCCTG 3 -- us2k10--------
    rs1423086901,2
    --3825722(+) AACCTC/TGTCTC 3 -- us2k10--------
    rs778646131,2
    C,F,--3825932(+) GGCTCG/ATGGGT 3 -- us2k15Minor allele frequency- A:0.08WA CSA NA 244
    rs1512831601,2
    --3826058(+) CTGTTG/TCCCTA 3 -- us2k10--------
    rs60844921,2
    C,H--3826076(+) tttcaG/Aatcat 3 -- us2k16Minor allele frequency- A:0.00NS EA NA 402
    rs1405392281,2
    --3826086(+) TGAGCC/TTTTGA 3 -- us2k10--------
    rs1155726631,2
    C,F,--3826092(+) TTTGAT/CAGGAA 3 -- us2k12Minor allele frequency- C:0.05WA NA 238

    HapMap Linkage Disequilibrium report for MAVS (3827449 - 3856762 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 1 variation for MAVS
         1 CNV: 50655
    Human Gene Mutation Database (HGMD): MAVS

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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    MAVS for disorders           About GeneDecksing

    OMIM gene information: 609676    OMIM disorders: --

    13 diseases for MAVS:    About MalaCards
    systemic lupus erythematosus    lupus erythematosus    cytomegalovirus infection    chikungunya
    hepatitis c    rubella    hepatitis b    measles
    vaccinia    hepatitis    influenza    asthma
    pneumonia

    3 Novoseek disease relationships for MAVS gene    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    virus infection 60.1 3 16125763 (1), 16585524 (1), 20044805 (1)
    melanoma 42.9 1 19669308 (1)
    hepatitis c 29.6 3 16585524 (1), 17517627 (1)

    Human Genome Epidemiology (HuGE) Navigator: MAVS (4 documents)

    Export disorders for MAVS gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for MAVS gene, integrated from 9 sources (see all 138):
    (articles sorted by number of sources associating them with MAVS)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Identification and characterization of MAVS, a mitochondrial antiviral signaling protein that activates NF-kappaB and IRF 3. (PubMed id 16125763)1, 2, 3, 9 Seth R.B.... Chen Z.J. (2005)
    2. VISA is an adapter protein required for virus-triggered IFN-beta Signaling. (PubMed id 16153868)1, 2, 3 Xu L.-G.... Shu H.-B. (2005)
    3. IFN-induced TPR protein IFIT3 potentiates antiviral s ignaling by bridging MAVS and TBK1. (PubMed id 21813773)1, 2 Liu X.Y....Wang C. (2011)
    4. Negative regulation of MAVS-mediated innate immune response by PSMA7. (PubMed id 19734229)1, 2 Jia Y.... Zhong H. (2009)
    5. PCBP2 mediates degradation of the adaptor MAVS via th e HECT ubiquitin ligase AIP4. (PubMed id 19881509)1, 2 You F....Jiang Z. (2009)
    6. The tyrosine kinase c-Src enhances RIG-I (retinoic ac id-inducible gene I)-elicited antiviral signaling. (PubMed id 19419966)1, 2 Johnsen I.B....Anthonsen M.W. (2009)
    7. RNA polymerase III detects cytosolic DNA and induces type I interferons through the RIG-I pathway. (PubMed id 19631370)1, 2 Chiu Y.-H.... Chen Z.J. (2009)
    8. GB virus B disrupts RIG-I signaling by NS3/4A-mediated cleavage of the adaptor protein MAVS. (PubMed id 17093192)1, 2 Chen Z.... Li K. (2007)
    9. A probability-based approach for high-throughput protein phosphorylation analysis and site localization. (PubMed id 16964243)1, 2 Beausoleil S.A.... Gygi S.P. (2006)
    10. Cardif is an adaptor protein in the RIG-I antiviral pathway and is targeted by hepatitis C virus. (PubMed id 16177806)1, 2 Meylan E.... Tschopp J. (2005)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 57506 HGNC: 29233 AceView: KIAA1271 Ensembl:ENSG00000088888 euGenes: HUgn57506
    ECgene: MAVS Kegg: 57506 H-InvDB: MAVS

    (According to HUGE)
    About This Section
    HUGE: KIAA1271

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for MAVS Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for MAVS gene:
    Search GeneIP for patents involving MAVS

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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