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Aliases for MATN1-AS1 Gene

Subcategory (RNA class) for MATN1-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for MATN1-AS1 Gene

  • MATN1 Antisense RNA 1 2 3
  • MATN1 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for MATN1-AS1 Gene

ORGUL Members for MATN1-AS1 Gene

Previous GeneCards Identifiers for MATN1-AS1 Gene

  • GC01P031193

Summaries for MATN1-AS1 Gene

GeneCards Summary for MATN1-AS1 Gene

MATN1-AS1 (MATN1 Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MATN1-AS1 Gene

Genomics for MATN1-AS1 Gene

Genomic Location for MATN1-AS1 Gene

Start:
30,718,504 bp from pter
End:
30,726,827 bp from pter
Size:
8,324 bases
Orientation:
Plus strand

Genomic View for MATN1-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MATN1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MATN1-AS1 Gene

No data available for Regulatory Elements for MATN1-AS1 Gene

Proteins for MATN1-AS1 Gene

Post-translational modifications for MATN1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MATN1-AS1 Gene

Domains for MATN1-AS1 Gene

Gene Families for MATN1-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MATN1-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MATN1-AS1 Gene

Function for MATN1-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MATN1-AS1 Gene

Localization for MATN1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MATN1-AS1 Gene

Pathways for MATN1-AS1 Gene

SuperPathways for MATN1-AS1 Gene

No Data Available

Interacting Proteins for MATN1-AS1 Gene

Gene Ontology (GO) - Biological Process for MATN1-AS1 Gene

None

No data available for Pathways by source for MATN1-AS1 Gene

Transcripts for MATN1-AS1 Gene

mRNA/cDNA for MATN1-AS1 Gene

(3) Additional mRNA sequences :
(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MATN1-AS1 Gene

MATN1 antisense RNA 1:
Representative Sequences:

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate MATN1-AS1
    • Block miRNA regulation of MATN1-AS1 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for MATN1-AS1

    Primer Products

    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for MATN1-AS1 Gene

    No ASD Table

    Relevant External Links for MATN1-AS1 Gene

    GeneLoc Exon Structure for
    MATN1-AS1
    ECgene alternative splicing isoforms for
    MATN1-AS1

    Expression for MATN1-AS1 Gene

    mRNA expression in normal human tissues for MATN1-AS1 Gene

    SOURCE GeneReport for Unigene cluster for MATN1-AS1 Gene Hs.659751

    genes like me logo Genes that share expressions with MATN1-AS1: view

    In Situ Assay Products

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for MATN1-AS1 Gene

    Orthologs for MATN1-AS1 Gene

    Evolution for MATN1-AS1 Gene

    ENSEMBL:
    Gene Tree for MATN1-AS1 (if available)
    TreeFam:
    Gene Tree for MATN1-AS1 (if available)

    No data available for Orthologs for MATN1-AS1 Gene

    Paralogs for MATN1-AS1 Gene

    No data available for Paralogs for MATN1-AS1 Gene

    Variants for MATN1-AS1 Gene

    Sequence variations from dbSNP and Humsavar for MATN1-AS1 Gene

    SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
    rs1149047 -- 30,725,670(+) CTGGT(A/G)AGCAA intron-variant
    rs1149048 -- 30,725,886(+) TGTCC(A/G)GGGCT nc-transcript-variant
    rs3076162 -- 30,727,145(+) TTTTT(-/TTT)AGGAT downstream-variant-500B
    rs10665962 -- 30,727,123(+) TTTTT(-/TT)AGGAT downstream-variant-500B
    rs11285946 -- 30,726,098(+) AAAAA(-/A)GGCAG intron-variant

    Relevant External Links for MATN1-AS1 Gene

    HapMap Linkage Disequilibrium report
    MATN1-AS1

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for MATN1-AS1 Gene

    Disorders for MATN1-AS1 Gene

    No disorders were found for MATN1-AS1 Gene.

    No data available for UniProtKB/Swiss-Prot for MATN1-AS1 Gene

    Publications for MATN1-AS1 Gene

    1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

    Products for MATN1-AS1 Gene

    • QIAGEN qRT-PCR Assays for microRNAs that regulate MATN1-AS1
      • QuantiTect SYBR Green Assays in human,mouse,rat
      • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
      • QuantiFast Probe-based Assays in human,mouse,rat
      • Predesigned siRNA for gene silencing in human,mouse,rat for MATN1-AS1
      • Block miRNA regulation of MATN1-AS1 using miScript Target Protectors

      Sources for MATN1-AS1 Gene

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