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Aliases for MATN1-AS1 Gene

Subcategory (RNA class) for MATN1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for MATN1-AS1 Gene

  • MATN1 Antisense RNA 1 2 3 5
  • MATN1 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for MATN1-AS1 Gene

Previous GeneCards Identifiers for MATN1-AS1 Gene

  • GC01P031193

Summaries for MATN1-AS1 Gene

GeneCards Summary for MATN1-AS1 Gene

MATN1-AS1 (MATN1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MATN1-AS1 Gene

Genomics for MATN1-AS1 Gene

Regulatory Elements for MATN1-AS1 Gene

Enhancers for MATN1-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
- Elite enhancer/Elite enhancer-gene association

Enhancers around MATN1-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for MATN1-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

Genomic Location for MATN1-AS1 Gene

30,718,504 bp from pter
30,726,827 bp from pter
8,324 bases
Plus strand

Genomic View for MATN1-AS1 Gene

Genes around MATN1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MATN1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MATN1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MATN1-AS1 Gene

Proteins for MATN1-AS1 Gene

Post-translational modifications for MATN1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MATN1-AS1 Gene

Domains & Families for MATN1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MATN1-AS1 Gene

Function for MATN1-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MATN1-AS1 Gene

Localization for MATN1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MATN1-AS1 Gene

Pathways & Interactions for MATN1-AS1 Gene

SuperPathways for MATN1-AS1 Gene

No Data Available

Interacting Proteins for MATN1-AS1 Gene

Gene Ontology (GO) - Biological Process for MATN1-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for MATN1-AS1 Gene

Drugs & Compounds for MATN1-AS1 Gene

No Compound Related Data Available

Transcripts for MATN1-AS1 Gene

mRNA/cDNA for MATN1-AS1 Gene

(3) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MATN1-AS1 Gene

MATN1 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MATN1-AS1 Gene

No ASD Table

Relevant External Links for MATN1-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MATN1-AS1 Gene

mRNA expression in normal human tissues for MATN1-AS1 Gene

SOURCE GeneReport for Unigene cluster for MATN1-AS1 Gene:

genes like me logo Genes that share expression patterns with MATN1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MATN1-AS1 Gene

Orthologs for MATN1-AS1 Gene

Evolution for MATN1-AS1 Gene

Gene Tree for MATN1-AS1 (if available)
Gene Tree for MATN1-AS1 (if available)

No data available for Orthologs for MATN1-AS1 Gene

Paralogs for MATN1-AS1 Gene

No data available for Paralogs for MATN1-AS1 Gene

Variants for MATN1-AS1 Gene

Sequence variations from dbSNP and Humsavar for MATN1-AS1 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs3076162 -- 30,727,145(+) TTTTT(-/TTT)AGGAT downstream-variant-500B
rs10665962 -- 30,727,123(+) TTTTT(-/TT)AGGAT downstream-variant-500B
rs12404046 -- 30,727,031(+) ATTGG(A/T)ATCCT downstream-variant-500B
rs28521010 -- 30,725,860(+) CCCAA(A/C)CCCCC nc-transcript-variant
rs34346228 -- 30,727,241(+) TTCCC(-/C)ACCTC downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for MATN1-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv145n100 CNV gain 25217958
nsv460995 CNV gain 19166990
nsv509124 CNV insertion 20534489
nsv545947 CNV gain 21841781

Relevant External Links for MATN1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MATN1-AS1 Gene

Disorders for MATN1-AS1 Gene

Relevant External Links for MATN1-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for MATN1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MATN1-AS1 Gene

Publications for MATN1-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 65

Products for MATN1-AS1 Gene

Sources for MATN1-AS1 Gene

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