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Aliases for MATN1-AS1 Gene

Subcategory (RNA class) for MATN1-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for MATN1-AS1 Gene

  • MATN1 Antisense RNA 1 2 3
  • MATN1 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for MATN1-AS1 Gene

ORGUL Members for MATN1-AS1 Gene

Summaries for MATN1-AS1 Gene

GeneCards Summary for MATN1-AS1 Gene

MATN1-AS1 (MATN1 Antisense RNA 1) is a RNA Gene, and belongs to antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MATN1-AS1 Gene

Genomics for MATN1-AS1 Gene

Genomic Location for MATN1-AS1 Gene

Start:
30,718,504 bp from pter
End:
30,726,827 bp from pter
Size:
8,324 bases
Orientation:
Plus strand

Genomic View for MATN1-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MATN1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MATN1-AS1 Gene

No data available for Regulatory Elements for MATN1-AS1 Gene

Proteins for MATN1-AS1 Gene

Post-translational modifications for MATN1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MATN1-AS1 Gene

Domains for MATN1-AS1 Gene

Gene Families for MATN1-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs
genes like me logo Genes that share domains with MATN1-AS1: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for MATN1-AS1 Gene

Function for MATN1-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MATN1-AS1 Gene

Localization for MATN1-AS1 Gene

No data available for Gene Ontology (GO) - Cellular Components for MATN1-AS1 Gene

Pathways for MATN1-AS1 Gene

SuperPathways for MATN1-AS1 Gene

No Data Available

Interacting Proteins for MATN1-AS1 Gene

Gene Ontology (GO) - Biological Process for MATN1-AS1 Gene

None

No data available for Pathways by source for MATN1-AS1 Gene

Transcripts for MATN1-AS1 Gene

mRNA/cDNA for MATN1-AS1 Gene

(3) Additional mRNA sequences :
(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MATN1-AS1 Gene

MATN1 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MATN1-AS1 Gene

No ASD Table

Relevant External Links for MATN1-AS1 Gene

GeneLoc Exon Structure for
MATN1-AS1
ECgene alternative splicing isoforms for
MATN1-AS1

Expression for MATN1-AS1 Gene

mRNA expression in normal human tissues for MATN1-AS1 Gene

SOURCE GeneReport for Unigene cluster for MATN1-AS1 Gene Hs.659751

genes like me logo Genes that share expressions with MATN1-AS1: view

Orthologs for MATN1-AS1 Gene

Evolution for MATN1-AS1 Gene

ENSEMBL:
Gene Tree for MATN1-AS1 (if available)
TreeFam:
Gene Tree for MATN1-AS1 (if available)

No data available for Orthologs for MATN1-AS1 Gene

Paralogs for MATN1-AS1 Gene

No data available for Paralogs for MATN1-AS1 Gene

Variants for MATN1-AS1 Gene

Sequence variations from dbSNP and Humsavar for MATN1-AS1 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs1149047 -- 30,725,670(+) CTGGT(A/G)AGCAA intron-variant
rs1149048 -- 30,725,886(+) TGTCC(A/G)GGGCT nc-transcript-variant
rs3076162 -- 30,727,145(+) TTTTT(-/TTT)AGGAT downstream-variant-500B
rs10665962 -- 30,727,123(+) TTTTT(-/TT)AGGAT downstream-variant-500B
rs11285946 -- 30,726,098(+) AAAAA(-/A)GGCAG intron-variant

Relevant External Links for MATN1-AS1 Gene

HapMap Linkage Disequilibrium report
MATN1-AS1

No data available for Structural Variations from Database of Genomic Variants (DGV) for MATN1-AS1 Gene

Disorders for MATN1-AS1 Gene

No disorders were found for MATN1-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for MATN1-AS1 Gene

Publications for MATN1-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for MATN1-AS1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate MATN1-AS1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for MATN1-AS1
    • Block miRNA regulation of MATN1-AS1 using miScript Target Protectors

    Sources for MATN1-AS1 Gene

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