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Aliases for MAST4-IT1 Gene

Subcategory (RNA class) for MAST4-IT1 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for MAST4-IT1 Gene

  • MAST4 Intronic Transcript 1 2 3 5
  • MAST4 Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for MAST4-IT1 Gene

ORGUL Members for MAST4-IT1 Gene

Previous GeneCards Identifiers for MAST4-IT1 Gene

  • GC00U933613
  • GC05P065959

Summaries for MAST4-IT1 Gene

GeneCards Summary for MAST4-IT1 Gene

MAST4-IT1 (MAST4 Intronic Transcript 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for MAST4-IT1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MAST4-IT1 Gene

Genomics for MAST4-IT1 Gene

GeneHancer (GH) Regulatory Elements for MAST4-IT1 Gene

Promoters and enhancers for MAST4-IT1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I066645 Enhancer 0.7 ENCODE 0.4 -17.1 -17083 0.2 PKNOX1 NEUROD1 HIC1 CTBP1 GATA3 ZNF366 FOS ZNF444 SMARCE1 ZEB2 MAST4-IT1 ENSG00000248803 MAST4 GC05M066555
GH05I066653 Enhancer 0.6 ENCODE 0.4 -8.7 -8733 0.2 ZSCAN21 POLR2A ZBTB21 ZNF629 ZNF10 SCRT2 ZNF133 ZIC2 RFX5 MAST4 MAST4-IT1 ENSG00000248803 GC05M066555
GH05I066646 Enhancer 0.6 ENCODE 0.4 -15.5 -15543 0.2 SMARCE1 PKNOX1 SIN3A CEBPG FOXA1 ZNF217 CTBP1 PRDM6 GATA3 POLR2A MAST4-IT1 ENSG00000248803 MAST4 GC05M066555
GH05I066633 Enhancer 0.7 ENCODE 0.3 -28.1 -28082 0.8 SIX4 FOXA2 BMI1 ZNF2 CTBP1 PRDM10 SMARCE1 RFX1 FOXA3 ZNF10 MAST4 ENSG00000248803 MAST4-IT1 GC05M066555
GH05I066654 Enhancer 0.3 ENCODE 0.4 -7.0 -6952 0.9 HNF4A MAST4 MAST4-IT1 ENSG00000248803 GC05M066555
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MAST4-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MAST4-IT1 Gene

Genomic Locations for MAST4-IT1 Gene
chr5:66,662,331-66,662,988
(GRCh38/hg38)
Size:
658 bases
Orientation:
Plus strand
chr5:65,958,159-65,958,816
(GRCh37/hg19)

Genomic View for MAST4-IT1 Gene

Genes around MAST4-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MAST4-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MAST4-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for MAST4-IT1 Gene

Proteins for MAST4-IT1 Gene

Post-translational modifications for MAST4-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MAST4-IT1 Gene

Domains & Families for MAST4-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MAST4-IT1 Gene

Function for MAST4-IT1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MAST4-IT1 Gene

Localization for MAST4-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MAST4-IT1 Gene

Pathways & Interactions for MAST4-IT1 Gene

SuperPathways for MAST4-IT1 Gene

No Data Available

Interacting Proteins for MAST4-IT1 Gene

Gene Ontology (GO) - Biological Process for MAST4-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MAST4-IT1 Gene

Drugs & Compounds for MAST4-IT1 Gene

No Compound Related Data Available

Transcripts for MAST4-IT1 Gene

mRNA/cDNA for MAST4-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MAST4-IT1 Gene

No ASD Table

Relevant External Links for MAST4-IT1 Gene

GeneLoc Exon Structure for
MAST4-IT1
ECgene alternative splicing isoforms for
MAST4-IT1

Expression for MAST4-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MAST4-IT1 Gene

genes like me logo Genes that share expression patterns with MAST4-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MAST4-IT1 Gene

Orthologs for MAST4-IT1 Gene

Evolution for MAST4-IT1 Gene

ENSEMBL:
Gene Tree for MAST4-IT1 (if available)
TreeFam:
Gene Tree for MAST4-IT1 (if available)

No data available for Orthologs for MAST4-IT1 Gene

Paralogs for MAST4-IT1 Gene

No data available for Paralogs for MAST4-IT1 Gene

Variants for MAST4-IT1 Gene

Additional Variant Information for MAST4-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MAST4-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MAST4-IT1 Gene

Disorders for MAST4-IT1 Gene

No disorders were found for MAST4-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for MAST4-IT1 Gene

Publications for MAST4-IT1 Gene

No publications were found for MAST4-IT1 Gene.

Products for MAST4-IT1 Gene

Sources for MAST4-IT1 Gene

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