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Aliases for MAST4-IT1 Gene

Subcategory (RNA class) for MAST4-IT1 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for MAST4-IT1 Gene

  • MAST4 Intronic Transcript 1 2 3 5
  • MAST4 Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for MAST4-IT1 Gene

ORGUL Members for MAST4-IT1 Gene

Previous GeneCards Identifiers for MAST4-IT1 Gene

  • GC00U933613
  • GC05P065959

Summaries for MAST4-IT1 Gene

GeneCards Summary for MAST4-IT1 Gene

MAST4-IT1 (MAST4 Intronic Transcript 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for MAST4-IT1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MAST4-IT1 Gene

Genomics for MAST4-IT1 Gene

Regulatory Elements for MAST4-IT1 Gene

Enhancers for MAST4-IT1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05H066646 0.7 ENCODE 0.4 -15.5 -15544 0.2 SMARCE1 PKNOX1 SIN3A CEBPG FOXA1 ZNF217 CTBP1 PRDM6 GATA3 POLR2A MAST4-IT1 ENSG00000248803
GH05H066645 0.7 ENCODE 0.4 -17.1 -17084 0.2 PKNOX1 HIC1 CTBP1 GATA3 ZNF366 FOS SMARCE1 DPF2 ZEB2 ATF2 MAST4-IT1 ENSG00000248803
GH05H066653 0.6 ENCODE 0.4 -8.7 -8734 0.2 ZSCAN21 POLR2A ZBTB21 SCRT2 ZNF629 ZNF133 ZNF10 ZIC2 RFX5 MAST4 MAST4-IT1 ENSG00000248803
GH05H066633 0.7 ENCODE 0.3 -28.1 -28083 0.8 SIX4 FOXA2 BMI1 ZNF2 CTBP1 PRDM10 SMARCE1 RFX1 FOXA3 ZNF10 MAST4 ENSG00000248803 MAST4-IT1
GH05H066654 0.4 ENCODE 0.4 -7.0 -6952 0.9 HNF4A MAST4 MAST4-IT1 ENSG00000248803
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MAST4-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MAST4-IT1 Gene

Genomic Locations for MAST4-IT1 Gene
chr5:66,662,331-66,662,988
(GRCh38/hg38)
Size:
658 bases
Orientation:
Plus strand
chr5:65,958,159-65,958,816
(GRCh37/hg19)

Genomic View for MAST4-IT1 Gene

Genes around MAST4-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MAST4-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MAST4-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for MAST4-IT1 Gene

Proteins for MAST4-IT1 Gene

Post-translational modifications for MAST4-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MAST4-IT1 Gene

Domains & Families for MAST4-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MAST4-IT1 Gene

Function for MAST4-IT1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MAST4-IT1 Gene

Localization for MAST4-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MAST4-IT1 Gene

Pathways & Interactions for MAST4-IT1 Gene

SuperPathways for MAST4-IT1 Gene

No Data Available

Interacting Proteins for MAST4-IT1 Gene

Gene Ontology (GO) - Biological Process for MAST4-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MAST4-IT1 Gene

Drugs & Compounds for MAST4-IT1 Gene

No Compound Related Data Available

Transcripts for MAST4-IT1 Gene

mRNA/cDNA for MAST4-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MAST4-IT1 Gene

No ASD Table

Relevant External Links for MAST4-IT1 Gene

GeneLoc Exon Structure for
MAST4-IT1
ECgene alternative splicing isoforms for
MAST4-IT1

Expression for MAST4-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MAST4-IT1 Gene

genes like me logo Genes that share expression patterns with MAST4-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MAST4-IT1 Gene

Orthologs for MAST4-IT1 Gene

Evolution for MAST4-IT1 Gene

ENSEMBL:
Gene Tree for MAST4-IT1 (if available)
TreeFam:
Gene Tree for MAST4-IT1 (if available)

No data available for Orthologs for MAST4-IT1 Gene

Paralogs for MAST4-IT1 Gene

No data available for Paralogs for MAST4-IT1 Gene

Variants for MAST4-IT1 Gene

Relevant External Links for MAST4-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MAST4-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MAST4-IT1 Gene

Disorders for MAST4-IT1 Gene

No disorders were found for MAST4-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for MAST4-IT1 Gene

Publications for MAST4-IT1 Gene

No publications were found for MAST4-IT1 Gene.

Products for MAST4-IT1 Gene

Sources for MAST4-IT1 Gene

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