Free for academic non-profit institutions. Other users need a Commercial license

Aliases for MAST4-AS1 Gene

Subcategory (RNA class) for MAST4-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for MAST4-AS1 Gene

  • MAST4 Antisense RNA 1 2 3 5
  • MAST4 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for MAST4-AS1 Gene

Previous GeneCards Identifiers for MAST4-AS1 Gene

  • GC05M066299

Summaries for MAST4-AS1 Gene

GeneCards Summary for MAST4-AS1 Gene

MAST4-AS1 (MAST4 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MAST4-AS1 Gene

Genomics for MAST4-AS1 Gene

Regulatory Elements for MAST4-AS1 Gene

Enhancers for MAST4-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05F067002 0.7 ENCODE 33.6 -1.4 -1395 6.0 PKNOX1 ATF1 ARID4B SIN3A DMAP1 ZNF2 YY1 GLIS2 ELK1 FOS MAST4-AS1 CD180 GC05P067163
GH05F067008 1.2 FANTOM5 Ensembl ENCODE 31.9 -9.1 -9105 8.8 PKNOX1 SIN3A FEZF1 BRCA1 ZNF2 GLIS2 ZNF207 FOS ZNF263 REST MAST4-AS1 LOC359819 GC05P067163
GH05F067019 0.2 ENCODE 29.3 -17.2 -17180 2.9 ZNF652 MAST4-AS1 MAST4 GC05P067163
GH05F067033 1 Ensembl ENCODE 29 -30.3 -30347 3.0 ZNF680 HLF TAL1 OVOL3 CEBPB ARID1B OSR2 ZNF316 ZNF585B PBX2 MAST4-AS1 GC05P067163
GH05F067030 0.9 Ensembl ENCODE 27.5 -27.3 -27287 2.5 PKNOX1 GATA3 RFX1 PRDM10 ATF2 NR2F2 MAST4-AS1 MAST4 GC05P067163
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around MAST4-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for MAST4-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001410124 -946 3001 PKNOX1 ATF1 ARID4B SIN3A DMAP1 ZNF2 YY1 GLIS2 ELK1 GATA2

Genomic Location for MAST4-AS1 Gene

Chromosome:
5
Start:
67,001,383 bp from pter
End:
67,004,154 bp from pter
Size:
2,772 bases
Orientation:
Minus strand

Genomic View for MAST4-AS1 Gene

Genes around MAST4-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MAST4-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MAST4-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MAST4-AS1 Gene

Proteins for MAST4-AS1 Gene

Post-translational modifications for MAST4-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MAST4-AS1 Gene

Domains & Families for MAST4-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MAST4-AS1 Gene

Function for MAST4-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MAST4-AS1 Gene

Localization for MAST4-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MAST4-AS1 Gene

Pathways & Interactions for MAST4-AS1 Gene

SuperPathways for MAST4-AS1 Gene

No Data Available

Interacting Proteins for MAST4-AS1 Gene

Gene Ontology (GO) - Biological Process for MAST4-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MAST4-AS1 Gene

Transcripts for MAST4-AS1 Gene

mRNA/cDNA for MAST4-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MAST4-AS1 Gene

No ASD Table

Relevant External Links for MAST4-AS1 Gene

GeneLoc Exon Structure for
MAST4-AS1
ECgene alternative splicing isoforms for
MAST4-AS1

Expression for MAST4-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MAST4-AS1 Gene

genes like me logo Genes that share expression patterns with MAST4-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MAST4-AS1 Gene

Orthologs for MAST4-AS1 Gene

Evolution for MAST4-AS1 Gene

ENSEMBL:
Gene Tree for MAST4-AS1 (if available)
TreeFam:
Gene Tree for MAST4-AS1 (if available)

No data available for Orthologs for MAST4-AS1 Gene

Paralogs for MAST4-AS1 Gene

No data available for Paralogs for MAST4-AS1 Gene

Variants for MAST4-AS1 Gene

Sequence variations from dbSNP and Humsavar for MAST4-AS1 Gene

SNP ID Clin Chr 05 pos Sequence Context AA Info Type
rs1006986 -- 67,001,458(-) TATTT(A/T)TTTTT intron-variant, downstream-variant-500B
rs112670213 -- 67,005,562(+) GTGGA(A/G)AGGCA intron-variant, upstream-variant-2KB, utr-variant-5-prime
rs113385163 -- 67,003,869(+) CATGA(A/T)GCCAA intron-variant, nc-transcript-variant, upstream-variant-2KB
rs113882025 -- 67,004,205(+) CGCGC(C/T)GCGGC intron-variant, upstream-variant-2KB
rs114266497 -- 67,006,040(+) ACCTG(A/T)AACTT intron-variant, upstream-variant-2KB, utr-variant-5-prime

Relevant External Links for MAST4-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MAST4-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MAST4-AS1 Gene

Disorders for MAST4-AS1 Gene

Relevant External Links for MAST4-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MAST4-AS1

No disorders were found for MAST4-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MAST4-AS1 Gene

Publications for MAST4-AS1 Gene

No publications were found for MAST4-AS1 Gene.

Products for MAST4-AS1 Gene

Sources for MAST4-AS1 Gene

Content
Loading form....