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Aliases for MAST4-AS1 Gene

Subcategory (RNA class) for MAST4-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for MAST4-AS1 Gene

  • MAST4 Antisense RNA 1 2 3 5
  • MAST4 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for MAST4-AS1 Gene

Previous GeneCards Identifiers for MAST4-AS1 Gene

  • GC05M066299

Summaries for MAST4-AS1 Gene

GeneCards Summary for MAST4-AS1 Gene

MAST4-AS1 (MAST4 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MAST4-AS1 Gene

Genomics for MAST4-AS1 Gene

Regulatory Elements for MAST4-AS1 Gene

Enhancers for MAST4-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05G067008 1.9 FANTOM5 Ensembl ENCODE dbSUPER 32 -9.1 -9105 8.8 PKNOX1 FOXA2 SIN3A FEZF1 BRCA1 ZNF2 TCF12 GLIS2 GATA2 ZNF207 MAST4-AS1 GC05P067163
GH05G067002 1.3 ENCODE dbSUPER 33.5 -1.4 -1395 6.0 PKNOX1 FOXA2 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF766 ZNF143 MAST4-AS1 CD180 GC05P067163
GH05G067058 1.2 Ensembl ENCODE dbSUPER 26.1 -55.7 -55688 2.4 NFIB JUN MAX ZNF664 ZFHX2 GATA2 FOS MAFK EGR2 BHLHE40 MAST4-AS1 MAST4 GC05P067163
GH05G067030 1.1 Ensembl ENCODE dbSUPER 27.5 -27.3 -27287 2.5 PKNOX1 RFX1 ATF2 NR2F2 GATA3 BCL6B FOS PRDM10 HNF4A PRDM4 MAST4-AS1 MAST4 GC05P067163
GH05G067033 1.2 Ensembl ENCODE dbSUPER 21.3 -30.2 -30168 2.4 TAL1 ZSCAN4 CEBPG ZNF316 MAFK ZNF174 ZNF680 HLF MAFG CEBPB MAST4-AS1 GC05P067163
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MAST4-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for MAST4-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000181705 -846 2801 PKNOX1 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF766 FOS KAT8

Genomic Location for MAST4-AS1 Gene

Chromosome:
5
Start:
67,001,383 bp from pter
End:
67,004,154 bp from pter
Size:
2,772 bases
Orientation:
Minus strand

Genomic View for MAST4-AS1 Gene

Genes around MAST4-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MAST4-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MAST4-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MAST4-AS1 Gene

Proteins for MAST4-AS1 Gene

Post-translational modifications for MAST4-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MAST4-AS1 Gene

Domains & Families for MAST4-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MAST4-AS1 Gene

Function for MAST4-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MAST4-AS1 Gene

Localization for MAST4-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MAST4-AS1 Gene

Pathways & Interactions for MAST4-AS1 Gene

SuperPathways for MAST4-AS1 Gene

No Data Available

Interacting Proteins for MAST4-AS1 Gene

Gene Ontology (GO) - Biological Process for MAST4-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MAST4-AS1 Gene

Drugs & Compounds for MAST4-AS1 Gene

No Compound Related Data Available

Transcripts for MAST4-AS1 Gene

mRNA/cDNA for MAST4-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MAST4-AS1 Gene

No ASD Table

Relevant External Links for MAST4-AS1 Gene

GeneLoc Exon Structure for
MAST4-AS1
ECgene alternative splicing isoforms for
MAST4-AS1

Expression for MAST4-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MAST4-AS1 Gene

genes like me logo Genes that share expression patterns with MAST4-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MAST4-AS1 Gene

Orthologs for MAST4-AS1 Gene

Evolution for MAST4-AS1 Gene

ENSEMBL:
Gene Tree for MAST4-AS1 (if available)
TreeFam:
Gene Tree for MAST4-AS1 (if available)

No data available for Orthologs for MAST4-AS1 Gene

Paralogs for MAST4-AS1 Gene

No data available for Paralogs for MAST4-AS1 Gene

Variants for MAST4-AS1 Gene

Sequence variations from dbSNP and Humsavar for MAST4-AS1 Gene

SNP ID Clin Chr 05 pos Sequence Context AA Info Type
rs1000143351 -- 67,005,038(+) AACTT(C/T)ACTTT intron-variant, upstream-variant-2KB, reference, synonymous-codon
rs1000144278 -- 67,004,667(+) GCTTT(C/G)AGCAG intron-variant, upstream-variant-2KB, utr-variant-5-prime
rs1001642020 -- 67,005,371(+) AGGAG(A/G)AGATA intron-variant, upstream-variant-2KB, utr-variant-5-prime
rs1003359193 -- 67,004,102(+) AGCCG(A/C)GGGTT intron-variant, nc-transcript-variant, upstream-variant-2KB
rs1003490638 -- 67,002,392(+) AAATG(A/C)CTATA intron-variant

Relevant External Links for MAST4-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MAST4-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MAST4-AS1 Gene

Disorders for MAST4-AS1 Gene

Relevant External Links for MAST4-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MAST4-AS1

No disorders were found for MAST4-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MAST4-AS1 Gene

Publications for MAST4-AS1 Gene

No publications were found for MAST4-AS1 Gene.

Products for MAST4-AS1 Gene

Sources for MAST4-AS1 Gene

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