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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

MARK2 Gene

protein-coding   GIFtS: 62
GCID: GC11P063606

MAP/microtubule affinity-regulating kinase 2

(Previous name: ELKL motif kinase )
(Previous symbol: EMK1)
 Explore 8 diseases affiliated with
MARK2 via our new
 Human Malady Compendium 
Biological research products
for MARK2
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
MAP/Microtubule Affinity-Regulating Kinase 21 2 3     EC 2.7.11.13 8
EMK11 2 3 5     ELKL Motif Kinase1
Par1b1 2 3     Ser/Thr Protein Kinase PAR-1B2
PAR-11 2     Serine/Threonine Protein Kinase EMK2
EMK-12 3     Serine/Threonine-Protein Kinase MARK22
Par-1b2 3     EC 2.7.11.263
ELKL Motif Kinase 12 3     PAR1 Homolog3
PAR1 Homolog B2 3     EC 2.7.118

External Ids:    HGNC: 33321   Entrez Gene: 20112   Ensembl: ENSG000000725187   OMIM: 6005265   UniProtKB: Q7KZI73   

Export aliases for MARK2 gene to outside databases

Previous GC identifers: GC11P066121 GC11P065286 GC11P063857 GC11P063382 GC11P063431 GC11P063363 GC11P059934


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for MARK2:
This gene encodes a member of the Par-1 family of serine/threonine protein kinases. The protein is an important
regulator of cell polarity in epithelial and neuronal cells, and also controls the stability of microtubules through
phosphorylation and inactivation of several microtubule-associating proteins. The protein localizes to cell membranes.
Multiple transcript variants encoding different isoforms have been found for this gene. (provided by RefSeq, Jul 2009)

UniProtKB/Swiss-Prot: MARK2_HUMAN, Q7KZI7
Function: Serine/threonine-protein kinase involved in cell polarity and microtubule dynamics regulation. Phosphorylates
CRTC2/TORC2, DCX, HDAC7, KIF13B, MAP2, MAP4, MAPT/TAU, and RAB11FIP2. Plays a key role in cell polarity by
phosphorylating the microtubule-associated proteins MAP2, MAP4 and MAPT/TAU at KXGS motifs, causing detachment from
microtubules, and their disassembly. Regulates epithelial cell polarity by phosphorylating RAB11FIP2. Involved in the
regulation of neuronal migration through its dual activities in regulating cellular polarity and microtubule dynamics,
possibly by phosphorylating and regulating DCX. Regulates axogenesis by phosphorylating KIF13B, promoting interaction
between KIF13B and 14-3-3 and inhibiting microtubule-dependent accumulation of KIF13B. Also required for neurite
outgrowth and establishment of neuronal polarity. Regulates localization and activity of some histone deacetylases by
mediating phosphorylation of HDAC7, promoting subsequent interaction between HDAC7 and 14-3-3 and export from the
nucleus. Also acts as a positive regulator of the Wnt signaling pathway, probably by mediating phosphorylation of
dishevelled proteins (DVL1, DVL2 and/or DVL3). Modulates the developmental decision to build a columnar versus a
hepatic epithelial cell apparently by promoting a switch from a direct to a transcytotic mode of apical protein
delivery. Essential for the asymmetric development of membrane domains of polarized epithelial cells

Gene Wiki entry for MARK2


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000011.9  NC_018922.1  NT_167190.1  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the MARK2 gene promoter:
         PPAR-gamma1   AP-2alpha isoform 3   PPAR-gamma2   AP-2alpha isoform 2   AP-2alpha isoform 4   AP-2alpha   AP-2alphaA   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmids (see all 2): MARK2 promoter sequence
   Search SABiosciences Chromatin IP Primers for MARK2

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat MARK2


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 11q13.1   Ensembl cytogenetic band:  11q13.1   HGNC cytogenetic band: 11q13.1

MARK2 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
MARK2 gene location

GeneLoc information about chromosome 11         GeneLoc Exon Structure

GeneLoc location for GC11P063606:  view genomic region     (about GC identifiers)

Start:
63,606,400 bp from pter      End:
63,678,492 bp from pter
Size:
72,093 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: MARK2_HUMAN, Q7KZI7 (See protein sequence)
Recommended Name: Serine/threonine-protein kinase MARK2  
Size: 788 amino acids; 87911 Da
Cofactor: Magnesium (By similarity)
Subunit: Homodimer. Interacts with PAK7/PAK5; leading to inhibit the protein kinase activity (By similarity). Interacts
(when phosphorylated at Thr-596) with YWHAZ. In case of infection, interacts with H.pylori CagA, leading to inhibit
kinase activity and junctional and polarity defects
Subcellular location: Cell membrane; Peripheral membrane protein. Cytoplasm. Note=Phosphorylation at Thr-596 by
PRKCZ/aPKC and subsequent interaction with 14-3-3 protein YWHAZ promotes relocation from the cell membrane to the
cytoplasm
Sequence caution: Sequence=AAK82368.1; Type=Erroneous initiation; Note=Translation N-terminally extended;
1 PDB 3D structure from and Proteopedia for MARK2:
3IEC (3D)    
Secondary accessions: Q15449 Q15524 Q5XGA3 Q68A18 Q96HB3 Q96RG0
Alternative promoter usage, Alternative splicing: 16 isoforms:  Q7KZI7-1   Q7KZI7-2   Q7KZI7-3   Q7KZI7-4   Q7KZI7-5   Q7KZI7-6   Q7KZI7-7   Q7KZI7-8   
Q7KZI7-9   Q7KZI7-10   Q7KZI7-11   Q7KZI7-12   Q7KZI7-13   Q7KZI7-14   Q7KZI7-15   Q7KZI7-16   
(Produced by alternative splicing of isoform 1. Contains a phosphoserine at position 409)

Explore the universe of human proteins at neXtProt for MARK2: NX_Q7KZI7

Post-translational modifications:

  • Autophosphorylated. Phosphorylated at Thr-208 by STK11/LKB1 in complex with STE20-related adapter-alpha (STRADA) pseudo
  • kinase and CAB39. Phosphorylation at Thr-208 by TAOK1 activates the kinase activity, leading to phosphorylation and
    detachment of MAPT/TAU from microtubules. Phosphorylation at Ser-212 by GSK3-beta (GSK3B) inhibits the kinase
    activity. Phosphorylation by CaMK1 promotes activity and is required to promote neurite outgrowth. Phosphorylation at
    Thr-596 by PRKCZ/aPKC in polarized epithelial cells inhibits the kinase activity and promotes binding to 14-3-3
    protein YWHAZ, leading to relocation from cell membrane to cytoplasm1
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q7KZI7

  • 4/23 DME Specific Peptides for MARK2 (Q7KZI7) (see all 23)
     FRQIVSA  FAKVKLA  EYASGGE  LVAHGRM 

    MARK2 Protein expression data from MOPED and PaxDb:    About this image 
    MARK2 Protein Expression
    REFSEQ proteins (5 alternative transcripts): 
    NP_001034558.2  NP_001156768.1  NP_001156769.1  NP_004945.4  NP_059672.2  

    ENSEMBL proteins: 
     ENSP00000425765   ENSP00000355091   ENSP00000294247   ENSP00000423452   ENSP00000444956  
     ENSP00000444859   ENSP00000437509   ENSP00000423974   ENSP00000423844   ENSP00000421075  
     ENSP00000386128   ENSP00000415494   ENSP00000385751   ENSP00000326632   ENSP00000367040  
     ENSP00000389184   ENSP00000367041  

    Human Recombinant Protein Products for MARK2: 
    EMD Millipore Purified and/or Recombinant MARK2 Protein
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    OriGene Purified Protein: MARK2
    OriGene Protein Over-expression Lysate (see all 2): MARK2
    OriGene Custom Protein Services for MARK2 
    GenScript Custom Purified and Recombinant Proteins Services for MARK2
    Novus Biologicals MARK2 Proteins
    Novus Biologicals MARK2 Lysates
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for MARK2

    Gene Ontology (GO): 4 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005634nucleus IEA--
    GO:0005886plasma membrane IEA--
    GO:0016020membrane IMP14976552
    GO:0045180basal cortex IEA--

    MARK2 for ontologies           About GeneDecksing



    MARK2 Antibody Products: 
    EMD Millipore Mono- and Polyclonal Antibodies for the study of MARK2
    Browse R&D Systems for Antibodies
    Cell Signaling Technology (CST) Antibodies for MARK2 
    OriGene Antibodies (see all 2): MARK2
    OriGene Custom Antibody Services for MARK2 
    GenScript Custom Superior Antibodies Services for MARK2
    Novus Biologicals MARK2 Antibodies
    Abcam antibodies for MARK2 
    Uscn Antibodies for MARK2
    ThermoFisher Antibodies for MARK2

    Assay Products for MARK2: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for MARK2
    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for MARK2


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    MARK2 for domains           About GeneDecksing

    5/7 InterPro domains/families (see all 7):
     IPR017441 Protein_kinase_ATP_BS
     IPR001772 KA1_dom
     IPR002290 Ser/Thr_dual-sp_kinase_dom
     IPR011009 Kinase-like_dom
     IPR008271 Ser/Thr_kinase_AS

    Graphical View of Domain Structure for InterPro Entry Q7KZI7

    ProtoNet protein and cluster: Q7KZI7

    2 Blocks protein families:
    IPB000449 Ubiquitin-associated domain
    IPB001772 Kinase-associated


    UniProtKB/Swiss-Prot: MARK2_HUMAN, Q7KZI7
    Domain: The UBA domain does not seem to bind ubiquitin and ubiquitin-like and might play a role in regulating the
    enzyme conformation and localization. Activation of the kinase activity following phosphorylation at Thr-208 is
    accompanied by a conformational change that alters the orientation of the UBA domain with respect to the catalytic
    domain
    Domain: The KA1 domain mediates binding to phospholipids and targeting to membranes (By similarity)
    Similarity: Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. SNF1 subfamily
    Similarity: Contains 1 KA1 (kinase-associated) domain
    Similarity: Contains 1 protein kinase domain
    Similarity: Contains 1 UBA domain


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Molecular Function:

         UniProtKB/Swiss-Prot Summary: MARK2_HUMAN, Q7KZI7
    Function: Serine/threonine-protein kinase involved in cell polarity and microtubule dynamics regulation. Phosphorylates
    CRTC2/TORC2, DCX, HDAC7, KIF13B, MAP2, MAP4, MAPT/TAU, and RAB11FIP2. Plays a key role in cell polarity by
    phosphorylating the microtubule-associated proteins MAP2, MAP4 and MAPT/TAU at KXGS motifs, causing detachment from
    microtubules, and their disassembly. Regulates epithelial cell polarity by phosphorylating RAB11FIP2. Involved in the
    regulation of neuronal migration through its dual activities in regulating cellular polarity and microtubule dynamics,
    possibly by phosphorylating and regulating DCX. Regulates axogenesis by phosphorylating KIF13B, promoting interaction
    between KIF13B and 14-3-3 and inhibiting microtubule-dependent accumulation of KIF13B. Also required for neurite
    outgrowth and establishment of neuronal polarity. Regulates localization and activity of some histone deacetylases by
    mediating phosphorylation of HDAC7, promoting subsequent interaction between HDAC7 and 14-3-3 and export from the
    nucleus. Also acts as a positive regulator of the Wnt signaling pathway, probably by mediating phosphorylation of
    dishevelled proteins (DVL1, DVL2 and/or DVL3). Modulates the developmental decision to build a columnar versus a
    hepatic epithelial cell apparently by promoting a switch from a direct to a transcytotic mode of apical protein
    delivery. Essential for the asymmetric development of membrane domains of polarized epithelial cells
    Catalytic activity: ATP + a protein = ADP + a phosphoprotein
    Catalytic activity: ATP + [tau protein] = ADP + [tau protein] phosphate
    Enzyme regulation: Inhibited by PAK7/PAK5; inhibition is independent of the kinase activity of PAK7/PAK5 (By
    similarity). Activated by phosphorylation on Thr-208. Inhibited by phosphorylation at Ser-212 and Thr-596. Inhibited
    by hymenialdisine. Specifically inhibited by the H.pylori CagA peptide FPLKRHDKVDDLSK that mimics host substrates and
    binds to the kinase substrate-binding site

         Enzyme Numbers (IUBMB): EC 2.7.11.11 2 EC 2.7.112 EC 2.7.11.261

         Gene Ontology (GO): 5/8 molecular function terms (GO ID links to tree view) (see all 8):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000287magnesium ion binding IDA14976552
    GO:0004672protein kinase activity ----
    GO:0004674protein serine/threonine kinase activity NAS8274451
    GO:0005515protein binding IPI19615732
    GO:0005524ATP binding IDA14976552
         
    MARK2 for ontologies           About GeneDecksing


    Phenotypes:
         4 GenomeRNAi human phenotypes for MARK2:
     Decreased 12E8 tau but not tot  Decreased focal adhesion (FA)   Decreased substrate adherent c  Upregulation of Wnt/beta-caten 

         15/17 MGI mutant phenotypes (inferred from 2 alleles(MGI details for Mark2) (see all 17):
     adipose tissue  behavior/neurological  cardiovascular system  cellular  digestive/alimentary 
     embryogenesis  endocrine/exocrine gland  growth/size  hematopoietic system  homeostasis/metabolism 
     immune system  liver/biliary system  mortality/aging  nervous system  renal/urinary system 

    MARK2 for phenotypes           About GeneDecksing

    Animal Models:
         Mouse knock-out Mark2tm1Hpw for MARK2
       inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for MARK2 

    miRNA
    Products:
        
    OriGene 3'-UTR Clone (see all 5): MARK2
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat MARK2
    8/111 QIAGEN miScript miRNA Assays for microRNAs that regulate MARK2 (see all 111):
    hsa-miR-640 hsa-miR-520e hsa-miR-193a-3p hsa-miR-1321 hsa-miR-3194-5p hsa-miR-578 hsa-miR-519a hsa-miR-4267
    SwitchGear 3'UTR luciferase reporter plasmidMARK2 3' UTR sequence
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for MARK2 (see all 7)
    OriGene shRNA RFP: MARK2
    OriGene siRNA: MARK2
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat MARK2
    Sirion Biotech Custom design and validation of potent shRNA sequences against MARK2 

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for MARK2
    Sirion Biotech Customized adenovirus for overexpression of MARK2 
    Sirion Biotech Customized adenovirus for potent knockdown of MARK2

    Clone
    Products:
         
    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for MARK2 (see all 12)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for MARK2 (see all 8)
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector (see all 5): MARK2 (NM_017490)
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for MARK2
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat MARK2 

    Cell Line
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    GenScript Custom overexpressing Cell Line Services for MARK2
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    Sirion Biotech Customized inducible overexpressing cell line services for MARK2

    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MARK2


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/9 super-pathways (see all 9About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Neuroscience
    Neuroscience1.00
    2Glucose / Energy Metabolism
    Glucose / Energy Metabolism1.00
    3Cytoskeletal Signaling
    Cytoskeletal Signaling1.00
    4Notch signaling pathway
    Notch signaling pathway1.00
    5LKB1 signaling events
    LKB1 signaling events1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    1 EMD Millipore Pathway for MARK2
        Cytoplasmic microtubules

    1 Downloadable PowerPoint Slide of QIAGEN Pathway Central Maps for MARK2
        Epithelial Tight Junctions

    3 Cell Signaling Technology (CST) Pathways for MARK2
        Neuroscience
    Cytoskeletal Signaling
    Glucose / Energy Metabolism

    4 BioSystems Pathways for MARK2 
        Wnt Signaling Pathway NetPath
    TNF-alpha/NF-kB Signaling Pathway
    Notch signaling pathway
    LKB1 signaling events



    MARK2 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for MARK2

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/602 Interacting proteins for MARK2 (Q7KZI71, 2, 3 ENSP000003891844) via UniProtKB, MINT, STRING, and/or I2D (see all 602)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    YWHAHQ049171, 2, 3, ENSP000002489754EBI-516560,EBI-306940 MINT-8009011 MINT-8009018 I2D: score=3 STRING: ENSP00000248975
    YWHABP319461, 2, 3, ENSP000003001614EBI-516560,EBI-359815 MINT-51527 I2D: score=3 STRING: ENSP00000300161
    ARHGEF2Q929742, 3, ENSP000003153254MINT-7947479 I2D: score=2 STRING: ENSP00000315325
    YWHAEP622582, 3, ENSP000002643354MINT-7947479 I2D: score=2 STRING: ENSP00000264335
    SFNP319472, 3MINT-3975077 I2D: score=2 
    About this table

    Gene Ontology (GO): 5/11 biological process terms (GO ID links to tree view) (see all 11):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0001764neuron migration ISS--
    GO:0006468protein phosphorylation NAS8274451
    GO:0006979response to oxidative stress IEP16551573
    GO:0007243intracellular protein kinase cascade IDA14976552
    GO:0010976positive regulation of neuron projection development IDA12429843

    MARK2 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    MARK2 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for MARK2

    3 HMDB Compounds for MARK2    About this table
    CompoundSynonyms CAS #PubMed Ids
    ADPadenosindiphosphorsaeure (see all 8)58-64-0--
    Adenosine triphosphate5'-(tetrahydrogen triphosphate) Adenosine (see all 24)56-65-5--
    MagnesiumMagnesium (see all 2)7439-95-4--
    1 Novoseek chemical compound relationship for MARK2 gene    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    glycogen 32.1 1 16257959 (1)

    Search CenterWatch for drugs/clinical trials and news about MARK2 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, Sirion Biotech, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for MARK2 gene (5 alternative transcripts): 
    NM_001039469.2  NM_001163296.1  NM_001163297.1  NM_004954.4  NM_017490.3  

    Unigene Cluster for MARK2:

    MAP/microtubule affinity-regulating kinase 2
    Hs.567261  [show with all ESTs]
    Unigene Representative Sequence: NM_001039469
    18 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000508192 ENST00000361128 ENST00000350490 ENST00000502399 ENST00000543220
    ENST00000543674 ENST00000540169 ENST00000509502(uc009yox.2) ENST00000512060
    ENST00000513765 ENST00000408948 ENST00000425897 ENST00000535116 ENST00000402010(uc001nxw.3)
    ENST00000315032(uc001nxz.4 uc009yoy.3) ENST00000377809 ENST00000413835(uc001nxx.3)
    ENST00000377810(uc001nxv.4 uc001nxy.3)

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    hsa-miR-640 hsa-miR-520e hsa-miR-193a-3p hsa-miR-1321 hsa-miR-3194-5p hsa-miR-578 hsa-miR-519a hsa-miR-4267
    SwitchGear 3'UTR luciferase reporter plasmidMARK2 3' UTR sequence
    Inhib. RNA
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    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for MARK2 (see all 7)
    OriGene shRNA RFP: MARK2
    OriGene siRNA: MARK2
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat MARK2
    Sirion Biotech Custom design and validation of potent shRNA sequences against MARK2 
    Clone
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    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for MARK2 (see all 12)
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    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector (see all 5): MARK2 (NM_017490)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for MARK2
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat MARK2 
    Primer
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      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat MARK2
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat MARK2

    Additional cDNA sequence: 

    AB188493.1 AB271694.1 AF387638.1 AK225766.1 AK290339.1 AK307858.1 AY562187.1 AY562188.1 
    BC008771.2 BC084540.1 BT007342.1 X97630.1 Z25427.1 

    14 DOTS entries:

    DT.92469486  DT.120760201  DT.95152384  DT.86854993  DT.95276568  DT.100690476  DT.100819081  DT.95340835 
    DT.100819082  DT.95239808  DT.92001043  DT.92469437  DT.95328531  DT.97804175 

    24/204 AceView cDNA sequences (see all 204):

    BM142145 CR602633 AW138519 BE278938 AW295498 CB117860 BF002715 AA324104 
    AI370467 AI380486 AA369656 BX363849 BI791440 BM700779 BQ955537 AI248877 
    AI611105 AI394102 AW150937 BM762212 BM263187 BT007342 BQ066750 BF590710 

    GeneLoc Exon Structure

    5/11 Alternative Splicing Database (ASD) splice patterns (SP) for MARK2 (see all 11)    About this scheme

    ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5a · 5b ^ 6 ^ 7a · 7b ^ 8 ^ 9a · 9b ^ 10 ^ 11a · 11b ^ 12 ^ 13a · 13b ^ 14 ^ 15 ^ 16a · 16b ^ 17 ^ 18a · 18b ^
    SP1:                                            -                             -                                                                                 
    SP2:                                                                          -                                                                                 
    SP3:              -     -     -     -     -     -                             -                                                                                 
    SP4:              -     -     -     -     -     -                             -                                                                                 
    SP5:                    -     -     -     -     -                             -                                                                                 

    ExUns: 19a · 19b ^ 20 ^ 21 ^ 22 ^ 23 ^ 24
    SP1:        -                 -               
    SP2:        -                                 
    SP3:        -     -           -               
    SP4:        -     -                           
    SP5:                                          


    ECgene alternative splicing isoforms for MARK2

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    MARK2 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: TTTGTGGGGG
    MARK2 Expression
    About this image

    MARK2 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table

    1 LifeMap In Vivo Development Anatomical Compartment/Cell 
    Tissue Anatomical Compartment CellCategory (developmental path)
    TestisSeminiferous TubulesSecondary SpermatocyteGerm Cells, Male Gametocytes
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization

    See MARK2 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for MARK2

    SOURCE GeneReport for Unigene cluster: Hs.567261

    UniProtKB/Swiss-Prot: MARK2_HUMAN, Q7KZI7
    Tissue specificity: High levels of expression in heart, brain, skeletal muscle and pancreas, lower levels observed in
    lung, liver and kidney

        SABiosciences Expression via Pathway-Focused PCR Arrays including MARK2: 
              Cytoskeleton Regulators in human mouse rat
              Tight Junctions in human mouse rat

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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of eukaryotes.

    Orthologs for MARK2 gene from 6/26 species (see all 26)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    lizard
    (Anolis carolinensis)
    Reptilia MARK26
    --
    91(a)
    1 ↔ 1
    GL343699.1(134074-197411)
    African clawed frog
    (Xenopus laevis)
    Amphibia BC043730.12   -- 77.61(n)    BC043730.1 
    zebrafish
    (Danio rerio)
    Actinopterygii mark2a1 MAP/microtubule affinity-regulating kinase 2a 72.46(n)
    79.42(a)
      562231  XM_681460.4  XP_686552.4 
    fruit fly
    (Drosophila melanogaster)
    Insecta CG431436
    KP78b6
    (see all 4)
    KP78b
    (see all 4)
    7(a)
    37(a)
    (see all 4)
    possible ortholog
    possible ortholog
    (see all 4)
    3R(6090028-6133204)
    3R(7172014-7178853)
    worm
    (Caenorhabditis elegans)
    Secernentea par-16
    Serine/threonine-protein kinase par-1
    29(a)
    1 → many
    V(14112024-14141104)
    rice
    (Oryza sativa)
    Liliopsida --
    CAMK_KIN1/SNF1/Nim1_like_AMPKh.1 - CAMK includes c...
    24(a)
    possible ortholog
    7(5101510-5106299)


    ENSEMBL Gene Tree for MARK2 (if available)
    TreeFam Gene Tree for MARK2 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for MARK2 gene
    BRSK12  NUAK12  MARK12  BRSK22  SIK32  SNRK2  SIK22  NUAK22  
    NIM12  SIK12  MARK32  MARK42  
    18/128 SIMAP similar genes for MARK2 using alignment to 7 protein entries:     MARK2_HUMAN (see all proteins) (see all similar genes):
    Par1b    DKFZp547M202    MARK4    MARK1    MARK3    KIAA0999
    BRSK2    HUNK    BRAF    PDPK1    PRKAA1    NIM1
    STK32A    CDK3    CAMK2A    NEK8    NUAK1    KIN27

    MARK2 for paralogs           About GeneDecksing


    5/23 Pseudogenes.org Pseudogenes for MARK2 (see all 23)
    PGOHUM00000238567 PGOHUM00000238578 PGOHUM00000238891 PGOHUM00000242627 PGOHUM00000258641


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/1126 NCBI SNPs in MARK2 are shown (see all 1126    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 11 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs760494541,2
    F--59933084(+) AGCAGC/GCTTGT 4 -- us2k11Minor allele frequency- G:0.02WA 118
    rs734922801,2
    C--59933490(+) CTGGTG/ATGGGG 4 -- us2k11Minor allele frequency- A:0.50WA 2
    rs112316031,2
    C,F,H--59934137(+) CAAAGG/ACAAAG 4 -- us2k113Minor allele frequency- A:0.03NS EA NA WA 1788
    rs618861031,2
    C--59934783(+) CCCTTG/TAAGTG 4 -- us2k14Minor allele frequency- T:0.10CSA WA NA 241
    rs775000431,2
    C--59935708(+) CCCCC-/GGTCTC 4 -- int10--------
    rs1114540091,2
    C--59935709(+) CCCCCC/GTCTCC 4 -- int12Minor allele frequency- G:0.33NA CSA 3
    rs618861041,2
    --59935907(+) TCGCTT/GCCCCT 4 -- int14Minor allele frequency- G:0.07CSA WA NA EA 360
    rs802150761,2
    --59936060(+) TGCTTC/GCAACC 4 -- int10--------
    rs38509421,2
    C,F,A,H--59936497(+) GTGTCT/CTCACT 4 -- int119Minor allele frequency- C:0.11NS EA NA WA CSA 2140
    rs1875009551,2
    C--59936654(+) CCCCAC/TACCGT 4 -- int10--------

    HapMap Linkage Disequilibrium report for MARK2 (63606400 - 63678492 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for MARK2: --

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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    MARK2 for disorders           About GeneDecksing

    OMIM gene information: 600526    OMIM disorders: --

    8 diseases for MARK2:    About MalaCards
    asthenopia    neuronitis    gastric adenocarcinoma    neurodegeneration
    adenocarcinoma    melanoma    hepatitis    malaria

    1 disease from the University of Copenhagen DISEASES database for MARK2:
    Asthenopia
    Human Genome Epidemiology (HuGE) Navigator: MARK2 (1 document)

    Export disorders for MARK2 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for MARK2 gene, integrated from 9 sources (see all 93):
    (articles sorted by number of sources associating them with MARK2)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Human serine/threonine protein kinase EMK1: genome structure and cDNA cloning of isoforms produced by alternative splicing. (PubMed id 9730619)1, 2, 3, 9 Espinosa L. and Navarro E. (1998)
    2. Protein kinase MARK/PAR-1 is required for neurite outgrowth and establishment of neuronal polarity. (PubMed id 12429843)1, 2, 9 Biernat J....Mandelkow E.M. (2002)
    3. aPKC acts upstream of PAR-1b in both the establishment and maintenance of mammalian epithelial polarity. (PubMed id 15324659)1, 2, 9 Suzuki A.... Ohno S. (2004)
    4. Par1b/MARK2 phosphorylates kinesin-like motor protein GAKIN/KIF13B to regulate axon formation. (PubMed id 20194617)1, 2 Yoshimura Y....Miki H. (2010)
    5. A probability-based approach for high-throughput protein phosphorylation analysis and site localization. (PubMed id 16964243)1, 2 Beausoleil S.A.... Gygi S.P. (2006)
    6. The ubiquitin-associated domain of AMPK-related kinases regulates conformation and LKB1-mediated phosphorylation and activation. (PubMed id 16396636)1, 2 Jaleel M....Alessi D.R. (2006)
    7. New role for hPar-1 kinases EMK and C-TAK1 in regulating localization and activity of class IIa histone deacetylases. (PubMed id 16980613)1, 2 Dequiedt F....Kettmann R. (2006)
    8. MARK2/EMK1/Par-1Balpha phosphorylation of Rab11-family interacting protein 2 is necessary for the timely establishment of polarity in Madin-Darby canine kidney cells. (PubMed id 16775013)1, 2 Ducharme N.A....Goldenring J.R. (2006)
    9. Human chromosome 11 DNA sequence and analysis including novel gene identification. (PubMed id 16554811)1, 2 Taylor T.D....Sakaki Y. (2006)
    10. Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. (PubMed id 17081983)1, 2 Olsen J.V....Mann M. (2006)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 2011 HGNC: 3332 AceView: MARK2 Ensembl:ENSG00000072518 euGenes: HUgn2011
    ECgene: MARK2 H-InvDB: MARK2

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for MARK2 Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for MARK2 Genetics and Cytogenetics in Oncology and Haematology

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for MARK2 gene:
    Search GeneIP for patents involving MARK2

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0 and Sirion Biotech, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript, LifeMap BioReagents, and Sirion Biotech, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences, In Situ Hybridization Assays from
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    About This Section

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