Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

MARCH6 Gene

protein-coding   GIFtS: 49
GCID: GC05P010353

membrane-associated ring finger (C3HC4) 6, E3 ubiquitin...

(Previous name: membrane-associated ring finger (C3HC4) 6 )
  Search for MARCH6
in our new
 Human Malady Compendium 
Biological research products
for MARCH6
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Membrane-Associated Ring Finger (C3HC4) 6, E3 Ubiquitin Protein Ligase1 2     DOA102 5
TEB41 2 3 5     KIAA05973 5
MARCH-VI1 2 3     Membrane-Associated Ring Finger (C3HC4) 61
RNF1761 2 3     E3 Ubiquitin-Protein Ligase MARCH62
Doa10 Homolog2 3     Membrane-Associated RING-CH Finger Protein 62
Membrane-Associated RING Finger Protein 62 3     EC 6.3.2.-3
Membrane-Associated RING-CH Protein VI2 3     Protein TEB-43
RING Finger Protein 1762 3     

External Ids:    HGNC: 305501   Entrez Gene: 102992   Ensembl: ENSG000001454957   OMIM: 6132975   UniProtKB: O603373   

Export aliases for MARCH6 gene to outside databases

Previous GC identifer: GC05P010408


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for MARCH6:
This gene encodes a member of a family of membrane-associated E3 ubiquitin ligases containing RING-CH-type zinc finger
motifs. Ubiquitination of type II deiodinase by the encoded protein is an important regulatory step in thyroid hormone
signalling. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene.
(provided by RefSeq, Jul 2012)

UniProtKB/Swiss-Prot: MARH6_HUMAN, O60337
Function: E3 ubiquitin-protein ligase that promotes ubiquitination of DIO2, leading to its degradation. E3 ubiquitin
ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfer
the ubiquitin to targeted substrates. May cooperate with UBE2G1

Gene Wiki entry for MARCH6


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000005.9  NC_018916.1  NT_006576.16  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the MARCH6 gene promoter:
         FOXD3   CUTL1   Evi-1   Gfi-1   MEF-2A   Cart-1   ZIC2/Zic2   aMEF-2   Zic3   Pax-4a   
         Other transcription factors

Browse SwitchGear Promoter luciferase reporter plasmids
   Search SABiosciences Chromatin IP Primers for MARCH6

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat MARCH6


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 5p15.2   Ensembl cytogenetic band:  5p15.2   HGNC cytogenetic band: 5p15.2

MARCH6 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
MARCH6 gene location

GeneLoc information about chromosome 5         GeneLoc Exon Structure

GeneLoc location for GC05P010353:  view genomic region     (about GC identifiers)

Start:
10,353,815 bp from pter      End:
10,435,491 bp from pter
Size:
81,677 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: MARH6_HUMAN, O60337 (See protein sequence)
Recommended Name: E3 ubiquitin-protein ligase MARCH6  
Size: 910 amino acids; 102545 Da
Subunit: Interacts with DIO2
Subcellular location: Endoplasmic reticulum membrane; Multi-pass membrane protein
Sequence caution: Sequence=AAB66840.1; Type=Erroneous initiation; Note=Translation N-terminally extended;
Sequence=AAB66840.1; Type=Frameshift; Positions=381, 382, 383, 385, 391, 396, 418; Sequence=BAA25523.1; Type=Erroneous
initiation;
Secondary accessions: A5PKZ4 D3DTC8 O14670 Q86X77

Explore the universe of human proteins at neXtProt for MARCH6: NX_O60337

Post-translational modifications:

  • Auto-ubiquitinated, which results in proteasomal degradation1
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_O60337

  • MARCH6 Protein expression data from MOPED and PaxDb:    About this image 
    MARCH6 Protein Expression
    REFSEQ proteins (3 alternative transcripts): 
    NP_001257589.1  NP_001257590.1  NP_005876.2  

    ENSEMBL proteins: 
     ENSP00000414643   ENSP00000426000   ENSP00000425930   ENSP00000274140   ENSP00000424512  

    Human Recombinant Protein Products for MARCH6: 
    Browse Purified and Recombinant Proteins at EMD Millipore
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Browse OriGene full length recombinant human proteins expressed in human HEK293 cells
    Browse OriGene Protein Over-expression Lysates
    OriGene Custom Protein Services for MARCH6 
    GenScript Custom Purified and Recombinant Proteins Services for MARCH6
    Novus Biologicals MARCH6 Protein
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Browse Proteins at Uscn

    Gene Ontology (GO): 1 cellular component term (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0030176integral to endoplasmic reticulum membrane IDA15673284

    MARCH6 for ontologies           About GeneDecksing



    MARCH6 Antibody Products: 
    Browse EMD Millipore's Extensive Line of Mono- and Polyclonal Antibodies
    Browse R&D Systems for Antibodies
    OriGene Antibodies: MARCH6
    OriGene Custom Antibody Services for MARCH6 
    GenScript Custom Superior Antibodies Services for MARCH6
    Novus Biologicals MARCH6 Antibodies
    Abcam antibodies for MARCH6 
    Browse Antibodies at Uscn
    ThermoFisher Antibodies for MARCH6

    Assay Products for MARCH6: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for MARCH6
    Browse Enzo Life Sciences for kits & assays
    Browse ELISAs and CLIAs at Uscn


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    MARCH6 for domains           About GeneDecksing

    2 InterPro domains/families:
     IPR013083 Znf_RING/FYVE/PHD
     IPR011016 Znf_RING-CH

    Graphical View of Domain Structure for InterPro Entry O60337

    ProtoNet protein and cluster: O60337

    2 Blocks protein families:
    IPB001841 Zn-finger
    IPB011016 RINGv


    UniProtKB/Swiss-Prot: MARH6_HUMAN, O60337
    Domain: The RING-CH-type zinc finger domain is required for E3 ligase activity
    Similarity: Contains 1 RING-CH-type zinc finger


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Molecular Function:

         UniProtKB/Swiss-Prot Summary: MARH6_HUMAN, O60337
    Function: E3 ubiquitin-protein ligase that promotes ubiquitination of DIO2, leading to its degradation. E3 ubiquitin
    ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfer
    the ubiquitin to targeted substrates. May cooperate with UBE2G1

         Enzyme Number (IUBMB): EC 6.3.2.-1

         Gene Ontology (GO): 4 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004842ubiquitin-protein ligase activity IMP19651899
    GO:0008270zinc ion binding IEA--
    GO:0019899enzyme binding IPI19651899
    GO:0031624ubiquitin conjugating enzyme binding IPI15673284
         
    MARCH6 for ontologies           About GeneDecksing


    Animal Models:
       inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for MARCH6 

    miRNA
    Products:
        
    OriGene 3'-UTR Clone: MARCH6
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat MARCH6
    8/47 QIAGEN miScript miRNA Assays for microRNAs that regulate MARCH6 (see all 47):
    hsa-miR-142-5p hsa-miR-549 hsa-miR-3607-3p hsa-miR-429 hsa-miR-300 hsa-miR-106a hsa-miR-30d hsa-miR-374c
    Browse SwitchGear 3'UTR luciferase reporter plasmids
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for MARCH6
    OriGene shRNA RFP: MARCH6
    OriGene siRNA: MARCH6
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat MARCH6
    Sirion Biotech Custom design and validation of potent shRNA sequences against MARCH6 

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for MARCH6
    Sirion Biotech Customized adenovirus for overexpression of MARCH6 
    Sirion Biotech Customized adenovirus for potent knockdown of MARCH6

    Clone
    Products:
         
    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for MARCH6
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for MARCH6
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript Custom all cDNA clones Services for MARCH6
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for MARCH6
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat MARCH6 

    Cell Line
    Products:
         
    GenScript Custom overexpressing Cell Line Services for MARCH6
    Search LifeMap BioReagents cell lines for MARCH6
    Sirion Biotech Customized stable knockdown cell line services for MARCH6 
    Sirion Biotech Customized inducible knockdown cell line services for MARCH6
    Sirion Biotech Customized stable overexpressing cell line services for MARCH6
    Sirion Biotech Customized inducible overexpressing cell line services for MARCH6

    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MARCH6


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Protein processing in endoplasmic reticulum
    Protein processing in endoplasmic reticulum1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways



    1         Kegg Pathway  (Kegg details for MARCH6):
        Protein processing in endoplasmic reticulum

    UniProtKB/Swiss-Prot: MARH6_HUMAN, O60337
    Pathway: Protein modification; protein ubiquitination


    MARCH6 for pathways           About GeneDecksing

    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for MARCH6

    STRING Interaction Network Preview (showing 5 interactants - click image to see 7)

    5/70 Interacting proteins for MARCH6 (O603373 ENSP000002741404) via UniProtKB, MINT, STRING, and/or I2D (see all 70)

    InteractantInteraction Details
    GeneCardExternal ID(s)
    UBE2G2P606043, ENSP000003383484I2D: score=2 STRING: ENSP00000338348
    UBE2J2Q8N2K13, ENSP000003837194I2D: score=2 STRING: ENSP00000383719
    UBCP0CG483, ENSP000003448184I2D: score=2 STRING: ENSP00000344818
    AARSP495883I2D: score=3 
    ACOT8O147343I2D: score=3 
    About this table

    Gene Ontology (GO): 2 biological process terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0016567protein ubiquitination ----
    GO:0070936protein K48-linked ubiquitination IDA15673284

    MARCH6 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for MARCH6

    4 HMDB Compounds for MARCH6    About this table
    CompoundSynonyms CAS #PubMed Ids
    Adenosine monophosphate5'-AMP (see all 28)61-19-8--
    Adenosine triphosphate5'-(tetrahydrogen triphosphate) Adenosine (see all 24)56-65-5--
    Phosphoric acidacide phosphorique (FRENCH) (see all 20)7664-38-2--
    Pyrophosphate(4-)Diphosphoric acid ion (see all 10)14000-31-8--
    Search CenterWatch for drugs/clinical trials and news about MARCH6 / MARH6 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, Sirion Biotech, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for MARCH6 gene (3 alternative transcripts): 
    NM_001270660.1  NM_001270661.1  NM_005885.3  

    Unigene Cluster for MARCH6:

    Membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase
    Hs.432862  [show with all ESTs]
    Unigene Representative Sequence: NM_005885
    13 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000449913 ENST00000502795 ENST00000511802(uc003jeu.1) ENST00000503788
    ENST00000274140(uc003jet.1 uc011cmu.1 uc011cmv.1) ENST00000510872
    ENST00000507863 ENST00000506131 ENST00000514961 ENST00000510792 ENST00000512449
    ENST00000505253 ENST00000514312

    miRNA
    Products:
         
    OriGene 3'-UTR Clone: MARCH6
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat MARCH6
    8/47 QIAGEN miScript miRNA Assays for microRNAs that regulate MARCH6 (see all 47):
    hsa-miR-142-5p hsa-miR-549 hsa-miR-3607-3p hsa-miR-429 hsa-miR-300 hsa-miR-106a hsa-miR-30d hsa-miR-374c
    Browse SwitchGear 3'UTR luciferase reporter plasmids
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for MARCH6
    OriGene shRNA RFP: MARCH6
    OriGene siRNA: MARCH6
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat MARCH6
    Sirion Biotech Custom design and validation of potent shRNA sequences against MARCH6 
    Clone
    Products:
         
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for MARCH6
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for MARCH6
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript Custom all cDNA clones Services for MARCH6
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for MARCH6
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat MARCH6 
    Primer
    Products:
        
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for MARCH6
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat MARCH6
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat MARCH6
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat MARCH6

    Additional cDNA sequence: 

    AB011169.1 AF009301.1 AF056433.1 AF056443.1 AK000970.1 AK056198.1 AK296585.1 AK299339.1 
    AK300034.1 AK314686.1 AL080234.1 BC013761.1 BC039293.1 BC046148.1 BC111494.1 BC136461.1 
    BC136462.1 BC142679.1 BC142694.1 U52827.1 

    24/30 DOTS entries (see all 30):

    DT.119034  DT.99952876  DT.445205  DT.100857110  DT.70102348  DT.120823752  DT.97846982  DT.100796722 
    DT.120823769  DT.120823828  DT.95153569  DT.95207519  DT.100640725  DT.40303889  DT.75184473  DT.92441774 
    DT.95153574  DT.100745545  DT.100796723  DT.100796724  DT.120823757  DT.120823781  DT.120823806  DT.86846100 

    24/569 AceView cDNA sequences (see all 569):

    AL699390 AI474291 BM753076 BM911544 BM673903 BU784002 BE326757 BM680785 
    AI659023 BU679739 BM762004 AA280316 BI962679 AI123755 AA191101 AA411327 
    AU130760 AI421468 BX953192 CR610863 BG288023 BE139591 BQ019112 BC013761 

    GeneLoc Exon Structure

    5/6 Alternative Splicing Database (ASD) splice patterns (SP) for MARCH6 (see all 6)    About this scheme

    ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12a · 12b ^ 13a · 13b ^ 14 ^ 15 ^ 16 ^ 17a · 17b ^ 18 ^ 19a · 19b ^ 20 ^ 21 ^
    SP1:                                                                          -     -     -                                                                 -   
    SP2:                                                                                                                                                            
    SP3:                                                                                                                                                            
    SP4:                                                                                                                                                        -   
    SP5:                                                                                                                                                            

    ExUns: 22 ^ 23a · 23b ^ 24 ^ 25 ^ 26 ^ 27 ^ 28 ^ 29
    SP1:        -                 -                           
    SP2:                                                      
    SP3:                                                      
    SP4:                                                      
    SP5:        -                                             


    ECgene alternative splicing isoforms for MARCH6

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    MARCH6 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: TCCTTTTTTG
    MARCH6 Expression
    About this image
    See MARCH6 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for MARCH6

    SOURCE GeneReport for Unigene cluster: Hs.432862

    UniProtKB/Swiss-Prot: MARH6_HUMAN, O60337
    Tissue specificity: Present in brain (at protein level)

        SABiosciences Expression via Pathway-Focused PCR Array including MARCH6: 
              Ubiquitin Ligases in human mouse rat

    Primer
    Products:
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for MARCH6
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat MARCH6
    QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat MARCH6
    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat MARCH6
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MARCH6

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of eukaryotes.

    Orthologs for MARCH6 gene from 9/30 species (see all 30)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia March61 , 5 membrane-associated ring finger (C3HC4) 61, 5 90.5(n)1
    98.02(a)1
      15 (12.95 cM)5
    2234551  NM_172606.21  NP_766194.21 
     314558995 
    chicken
    (Gallus gallus)
    Aves MARCH61 membrane-associated ring finger (C3HC4) 6 83.33(n)
    93.94(a)
      420927  XM_419012.3  XP_419012.3 
    lizard
    (Anolis carolinensis)
    Reptilia MARCH66
    --
    93(a)
    1 ↔ 1
    4(66596458-66637513)
    African clawed frog
    (Xenopus laevis)
    Amphibia Xl.146612 Xenopus laevis transcribed sequence with strong similarity more 79.03(n)    BJ064869.1 
    zebrafish
    (Danio rerio)
    Actinopterygii Dr.265482 Danio rerio, Similar to RIKEN cDNA F830029L24 gene, more 80.47(n)    BC047861.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta CG13171 CG1317 55.66(n)
    53.6(a)
      38300  NM_001169857.1  NP_001163328.1 
    worm
    (Caenorhabditis elegans)
    Secernentea marc-61 Protein MARC-6 51.92(n)
    42.51(a)
      172986  NM_060422.3  NP_492823.2 
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons AT4G341001 RING/U-box domain-containing protein 46.75(n)
    34.15(a)
      829556  NM_119571.4  NP_195136.3 
    rice
    (Oryza sativa)
    Liliopsida Os06g06390001 hypothetical protein 45.51(n)
    33.33(a)
      4341618  NM_001064692.1  NP_001058157.1 


    ENSEMBL Gene Tree for MARCH6 (if available)
    TreeFam Gene Tree for MARCH6 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
      --

    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/1331 NCBI SNPs in MARCH6 are shown (see all 1331    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 5 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs133561451,2
    C,F--10351780(+) AGCCAC/TAGGGG 3 -- us2k111Minor allele frequency- T:0.38NS NA WA CSA EA 446
    rs1869090221,2
    --10351907(+) AGAGAA/GGTGTG 3 -- us2k10--------
    rs1910326711,2
    --10351922(+) ATTCAG/TGTATT 3 -- us2k10--------
    rs77204901,2
    C,F,A,H--10352123(+) CTAAAG/TACAAA 3 -- us2k128Minor allele frequency- T:0.36NS EA NA WA CSA 2711
    rs1840697301,2
    --10352334(+) ATACGC/TGCTCT 3 -- us2k10--------
    rs789565481,2
    F--10352369(+) AGCTCT/CTGGAG 3 -- us2k11Minor allele frequency- C:0.02WA 118
    rs77052441,2
    C,F,H--10352786(+) GAGTGA/GCATCA 3 -- us2k16Minor allele frequency- G:0.10NS NA WA 906
    rs770705571,2
    F--10353011(+) TCTGAC/TGTGGC 3 -- us2k11Minor allele frequency- T:0.03WA 118
    rs1453142251,2
    --10353012(+) CTGACA/GTGGCG 3 -- us2k10--------
    rs1471316251,2
    --10353026(+) CTTCTA/TATTTA 3 -- us2k10--------

    HapMap Linkage Disequilibrium report for MARCH6 (10353815 - 10435491 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for MARCH6: --

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing MARCH6
    DNA2.0 Custom Variant and Variant Library Synthesis for MARCH6

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    MARCH6 for disorders           About MalaCards

    MARCH6 for disorders           About GeneDecksing

    OMIM gene information: 613297    OMIM disorders: --


    Export disorders for MARCH6 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for MARCH6 gene, integrated from 9 sources (see all 21):
    (articles sorted by number of sources associating them with MARCH6)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. The E3 ubiquitin ligase TEB4 mediates degradation of type 2 iodothyronine deiodinase. (PubMed id 19651899)1, 2 Zavacki A.M....Bianco A.C. (2009)
    2. Membrane topology of the yeast endoplasmic reticulum-localized ubiquitin ligase Doa10 and comparison with its human ortholog TEB4 (MARCH-VI). (PubMed id 16373356)1, 2 Kreft S.G.... Hochstrasser M. (2006)
    3. TEB4 is a C4HC3 RING finger-containing ubiquitin ligase of the endoplasmic reticulum. (PubMed id 15673284)1, 2 Hassink G.... Wiertz E. (2005)
    4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    5. Downregulation of major histocompatibility complex class I by human ubiquitin ligases related to viral immune evasion proteins. (PubMed id 14722266)1, 3 Bartee E.... Frueh K. (2004)
    6. A conserved ubiquitin ligase of the nuclear envelope/endoplasmic reticulum that functions in both ER-associated and Matalpha2 repressor degradation. (PubMed id 11641273)1, 2 Swanson R.... Hochstrasser M. (2001)
    7. Prediction of the coding sequences of unidentified human genes. IX. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro. (PubMed id 9628581)1, 2 Nagase T....Ohara O. (1998)
    8. Methods for quantification of in vivo changes in prote in ubiquitination following proteasome and deubiquitinase inhibition. (PubMed id 22505724)1 Udeshi N.D....Carr S.A. (2012)
    9. A novel locus for body mass index on 5p15.2: a meta-an alysis of two genome-wide association studies. (PubMed id 22446040)1 Wang K.S....Callahan K. (2012)
    10. A proteome-wide, quantitative survey of in vivo ubiqui tylation sites reveals widespread regulatory roles. (PubMed id 21890473)1 Wagner S.A....Choudhary C. (2011)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 10299 HGNC: 30550 AceView: MARCH-VI Ensembl:ENSG00000145495 euGenes: HUgn10299
    ECgene: MARCH6 Kegg: 10299 H-InvDB: MARCH6

    (According to HUGE)
    About This Section
    HUGE: KIAA0597

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for MARCH6 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for MARCH6 gene:
    Search GeneIP for patents involving MARCH6

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0 and Sirion Biotech, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript, LifeMap BioReagents, and Sirion Biotech, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences, In Situ Hybridization Assays from
    Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory)
    About This Section

     
     EMD Millipore Custom Antibody & Bulk Services
     EMD Millipore Preclinical / Clinical Development Services
     EMD Millipore Immunoassay Services
     EMD Millipore Target Screening & Profiling Services

      
     Browse Antibodies   Browse Cell Culture Products  
     Browse ELISAs   Browse Flow Cytometry Kits  
     Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
     Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
     Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
     Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
     Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
     Browse Phosphatase Activity Assays/Reagents   Browse Recombinant/Natural Proteins  
     OriGene Antibodies for MARCH6   OriGene shRNA RFP for MARCH6  
     OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for MARCH6   OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for MARCH6  
     Browse OriGene Protein Over-expression Lysates   Browse OriGene Fluorogenic Cell Assay Kits  
     OriGene siRNA for MARCH6   OriGene 3'-UTR Clone for MARCH6  
     OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for MARCH6   OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for MARCH6  
     Browse OriGene GFP tagged cDNA clones in CMV expression vector   Browse OriGene MicroRNA Expression Plasmids  
     Browse OriGene basic RS shRNAs   Browse OriGene validated miRNA SYBR primer pairs  
     Browse OriGene full length recombinant human proteins expressed in human HEK293 cells   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
     OriGene Custom Antibody Services for MARCH6   OriGene Custom Protein Services for MARCH6  
     OriGene Custom Immunoassay Development  

     
     
     QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat MARCH6
     QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing MARCH6
     QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat MARCH6
     QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat MARCH6
     QIAGEN QuantiFast Probe-based Assays in human, mouse, rat MARCH6
     QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat MARCH6
     GenScript Custom Purified and Recombinant Proteins Services for MARCH6 GenScript Custom cDNA clones with any tag delivered in your preferred vector Services for MARCH6
     GenScript Custom Assay Services for MARCH6 GenScript Custom Superior Antibodies Services for MARCH6
     GenScript Custom overexpressing Cell Line Services for MARCH6 CloneReady with Over 120,000 Genes
     Gene Synthesis: Any Gene in Any Vector Vector-based siRNA and miRNA, Ready for Transfection
     Gene Mutant Library, Variants up to 10^11 Plasmid Preparation
     Custom Peptide Services
     Search for Antibodies & Assays

     Regulatory tfbs in MARCH6 promoter
     Search Chromatin IP Primers for MARCH6
     RT2 qPCR Primer Assay in human, mouse, rat MARCH6
     Search GNC Networks for MARCH6
     SABiosciences PCR Arrays including human, mouse, rat MARCH6
     Search Tocris compounds for MARCH6
     Browse Sino Biological Proteins and Antibodies
     Browse Sino Biological cDNA Clones
     Antibodies/Proteins Production Services
     Rabbit Monoclonal Antibody Platform
     Bulk Purchasing
     Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
     Novus Tissue Slides
     MARCH6 antibodies
     MARCH6 proteins
     Antibodies for MARCH6
     See all of Abcam's Antibodies, Kits and Proteins for MARCH6
     Custom Antibody / Protein Production Service
     Bulk Purchasing
     Advantages of Rabbit Monoclonal antibodies
     Abcam protocols and scientific support
     Browse ProSpec Recombinant Proteins




     Browse ELISAs, CLIAs, Proteins, and Antibodies at Uscn
     Search LifeMap BioReagents cell lines for MARCH6
     Gene Synthesis
     Protein Engineering
     Variant Library Synthesis
     Codon Optimization
     Protein Production and Purification
     Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MARCH6
     Browse SwitchGear 3'UTR luciferase reporter plasmids for MARCH6
     Browse SwitchGear Promoter luciferase reporter plasmids for MARCH6
     ThermoFisher Antibodies for MARCH6
     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat MARCH6
     inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for MARCH6
    Sirion Biotech Customized:
     stable knockdown cell line services for MARCH6
     inducible knockdown cell line services for MARCH6
     design and validation of potent shRNA sequences against MARCH6
     adenovirus for potent knockdown of MARCH6
     adenovirus for overexpression of MARCH6
     stable overexpressing cell line services for MARCH6
     inducible overexpressing cell line services for MARCH6
           
    GeneCards Homepage - Last full update: 19 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 26 Apr 2013 , 14 May 2013

    View Random Gene

    Category
    VWF
    (GIFTS: 73)
    von Willebrand factor
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


    Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

    Hot genes      Disease genes      MARCH6 gene at Home site.
    hostname: 356977-web1.xennexinc.com index build: 106 solr: 1.4