MARCH4 Gene
protein-coding GIFtS : 48
GCID: GC02 M217122
membrane-associated ring finger (C3HC4) 4, E3 ubiquitin... (Previous name: membrane-associated ring finger (C3HC4) 4 )
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Aliasesfor MARCH4 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Membrane-Associated Ring Finger (C3HC4) 4, E3 Ubiquitin Protein Ligase 1 2 Membrane-Associated RING-CH Protein IV2 3 RNF1741 2 3 5 RING Finger Protein 1742 3 MARCH-IV1 2 3 Membrane-Associated Ring Finger (C3HC4) 41 KIAA13991 3 5 E3 Ubiquitin-Protein Ligase MARCH42 Membrane-Associated RING Finger Protein 42 3 EC 6.3.2.-3
Export aliases for MARCH4 gene to outside databases Previous GC identifers: GC02M216949 GC02M216830 GC02M208976
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Summariesfor MARCH4 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for MARCH4 : MARCH4 is a member of the MARCH family of membrane-bound E3 ubiquitin ligases (EC 6.3.2.19). MARCH enzymes add ubiquitin (see MIM 191339) to target lysines in substrate proteins, thereby signaling their vesicular transport between membrane compartments. MARCH4 reduces surface accumulation of several membrane glycoproteins by directing them to the endosomal compartment (Bartee et al., 2004 (PubMed 14722266)).(supplied by OMIM, Apr 2010) UniProtKB/Swiss-Prot: MARH4_HUMAN, Q9P2E8 Function : E3 ubiquitin-protein ligase that may mediate ubiquitination of MHC-I and CD4, and promote their subsequentendocytosis and sorting to lysosomes via multivesicular bodies. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfer the ubiquitin to targeted substrates
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Genomic Viewsfor MARCH4 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000002.11 NC_018913.1 NT_005403.17 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the MARCH4 gene promoter: HOXA9B HOXA9 Nkx3-1 Nkx3-1 v4 RREB-1 Nkx3-1 v1 C/EBPalpha Nkx3-1 v2 SRY Nkx3-1 v3 Other transcription factors Search SABiosciences Chromatin IP Primers for MARCH4 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat MARCH4
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 2q35 Ensembl cytogenetic band: 2q35 HGNC cytogenetic band: 2q35 MARCH4 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 2 GeneLoc Exon Structure
GeneLoc location for GC02M217122: view genomic region
(about GC identifiers )
Start:
217,122,585 bp from pter
End:
217,236,750 bp from pter
Size:
114,166 bases
Orientation:
minus strand
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Proteinsfor MARCH4 gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: MARH4_HUMAN, Q9P2E8 (See
protein sequence )Recommended Name: E3 ubiquitin-protein ligase MARCH4 precursor Size : 410 amino acids; 45528 Da
Subcellular location : Golgi apparatus membrane; Multi-pass membrane protein
Sequence caution : Sequence=BAA92637.1; Type=Erroneous initiation;
Secondary accessions : Q4KMN7 Q86WR8Explore the universe of human proteins at neXtProt for MARCH4: NX_Q9P2E8 Post-translational modifications:
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_Q9P2E8 MARCH4 Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins: NP_065865.1 ENSEMBL proteins: ENSP00000273067 Human Recombinant Protein Products: Gene Ontology (GO): 4 cellular component terms (GO ID links to tree view) : About this table
MARCH4 for ontologies About GeneDecksing MARCH4 Antibody Products: Assay Products for MARCH4:
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Protein
Domains / Familiesfor MARCH4 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
MARCH4 for domains About GeneDecksing 2 InterPro domains/families :
Graphical View of Domain Structure for InterPro Entry Q9P2E8 ProtoNet protein and cluster: Q9P2E8
2 Blocks protein families : IPB001841 Zn-finger IPB011016 RINGv UniProtKB/Swiss-Prot: MARH4_HUMAN, Q9P2E8 Domain : The RING-CH-type zinc finger domain is required for E3 ligase activitySimilarity : Contains 1 RING-CH-type zinc finger
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Functionfor MARCH4 gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: UniProtKB/Swiss-Prot: MARH4_HUMAN, Q9P2E8 Function : E3 ubiquitin-protein ligase that may mediate ubiquitination of MHC-I and CD4, and promote their subsequentendocytosis and sorting to lysosomes via multivesicular bodies. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfer the ubiquitin to targeted substrates Enzyme Number (IUBMB): EC 6.3.2.- 1
Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for MARCH4 OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for MARCH4OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript Custom all cDNA clones Services for MARCH4 Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for MARCH4 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat MARCH4
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MARCH4
Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view) : About this table
MARCH4 for ontologies About GeneDecksing 1 GenomeRNAi human phenotype for MARCH4 :
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Pathways & Interactionsfor MARCH4 gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section UniProtKB/Swiss-Prot: MARH4_HUMAN, Q9P2E8 Pathway : Protein modification; protein ubiquitinationInteractions: Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for MARCH4 STRING Interaction
Network Preview (showing 1 interactants - click image to see more details)1 Interacting protein for MARCH4 (Q9P2E8 3 ENSP00000273067 4 ) via UniProtKB, MINT, STRING , and/or I2D
About this table Gene Ontology (GO): 1 biological process term (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0016567 protein ubiquitination
-- --
MARCH4 for ontologies About GeneDecksing
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Drugs & Compoundsfor MARCH4 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section Browse Tocris compounds for MARCH4 4 HMDB Compounds for MARCH4 About this table Search CenterWatch for drugs/clinical trials and news about MARCH4 / MARH4
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Transcriptsfor MARCH4 gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for MARCH4 gene: NM_020814.2 Unigene Cluster for MARCH4:
Membrane-associated ring finger (C3HC4) 4, E3 ubiquitin protein ligase Hs.170388 [show with all ESTs ] Unigene Representative Sequence: NM_020814 1 Ensembl transcript including schematic representation, and UCSC links where relevant : ENST00000273067 (uc002vgb.3 ) Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for MARCH4 OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for MARCH4OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript Custom all cDNA clones Services for MARCH4 DNA2.0 Custom Codon Optimized Gene
Synthesis Service for MARCH4 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat MARCH4
Additional cDNA sequence: AB037820.1 AL353945.1 BC048793.1 BC098448.1 U79281.1
1 DOTS entry : DT.311588
24/40 AceView cDNA sequences (see all 40 ):
AA872140 D81270 AA932963 AA989244 F10895 AA829736 BC048793 AI084800 AA878741 D81241 AB037820 BX283349 BV195150 U79281 AA349815 BM554507 F13295 BM561212 BM810875 AA349816 AA976832 BV195149 CO248049 AA927558 GeneLoc Exon Structure
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Expression for MARCH4 gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section MARCH4 expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: GGTATTAAAA
About this image MARCH4 expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table See MARCH4 Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for MARCH4 SOURCE GeneReport for Unigene cluster: Hs.170388 UniProtKB/Swiss-Prot: MARH4_HUMAN, Q9P2E8 Tissue specificity : Expressed in brain and placenta SABiosciences Custom PCR Arrays for MARCH4 Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for MARCH4Browse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat MARCH4 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat MARCH4 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat MARCH4 In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MARCH4
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Orthologsfor MARCH4 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of chordates.
Orthologs for MARCH4 gene from 3/12 species (see all 12 ) About this table
Organism
Taxonomic classification
Gene
Description
Human Similarity
Orthology Type
Details
chicken (Gallus gallus)
Aves
Mar-041
membrane-associated ring finger (C3HC4) 4
79.31(n) 84.97(a)
 
424221 XM_422071.3 XP_422071.3
lizard (Anolis carolinensis)
Reptilia
MARCH46
--
80(a)
1 ↔ 1
GL343344.1(1047541-1074824)
zebrafish (Danio rerio)
Actinopterygii
Dr.184802
Transcribed sequence
81.51(n)
 
BQ284523.1
ENSEMBL Gene Tree for MARCH4 (if available)TreeFam Gene Tree for MARCH4 (if available)
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Paralogsfor MARCH4 gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for MARCH4 gene MARCH8 2 MARCH3 2 MARCH11 2 MARCH1 2 MARCH2 2 MARCH9 2 2 SIMAP similar genes for MARCH4 using alignment to 1 protein entry: MARH4_HUMAN :MARCH9 MARCH11
MARCH4 for paralogs About GeneDecksing
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Genomic Variantsfor MARCH4 gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 2 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for MARCH4 (217122585 - 217236750 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV): 1 variation for MARCH4 1 Indel : 40418
SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing MARCH4
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Disorders
/ Diseasesfor MARCH4 gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
MARCH4 for disorders About MalaCards
MARCH4 for disorders About GeneDecksing
OMIM gene information: 608208
OMIM disorders : --Export disorders for MARCH4 gene to outside databases
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Publicationsfor MARCH4 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for MARCH4 gene integrated from 9 sources : (articles sorted by number of sources associating them with MARCH4) Utopia : connect your pdf to the dynamic world of online information
Downregulation of major histocompatibility complex class I by human ubiquitin ligases related to viral immune evasion proteins. (PubMed id 14722266) 1 , 2 , 3, 9 Bartee E.... Frueh K. (2004) Prediction of the coding sequences of unidentified human genes. XVI. The complete sequences of 150 new cDNA clones from brain which code for large proteins in vitro. (PubMed id 10718198) 1 , 2 , 3 Nagase T.... Ohara O. (2000) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 1 , 2 Gerhard D.S....Malek J. (2004) Genome-wide association analysis identifies susceptibi lity loci for migraine without aura. (PubMed id 22683712) 1 Freilinger T....van den Maagdenberg A.M. (2012) Membrane-Associated RING-CH proteins associate with B ap31 and target CD81 and CD44 to lysosomes. (PubMed id 21151997) 1 Bartee E....FrA1h K. (2010) Stress-regulated targeting of the NKG2D ligand Mult1 by a membrane-associated RING-CH family E3 ligase. (PubMed id 20870941) 1 Nice T.J....Raulet D.H. (2010) Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932) 1 Strausberg R.L....Marra M.A. (2002) Large-scale concatenation cDNA sequencing. (PubMed id 9110174) 1 Yu W.... Gibbs R.A. (1997) A "double adaptor" method for improved shotgun library construction. (PubMed id 8619474) 1 Andersson B.... Gibbs R.A. (1996)
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External Searches for MARCH4 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing MARCH4 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing MARCH4 gene
(According to HUGE )
About This Section
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Specialized Databases showing MARCH4 gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
Name Description
PharmGKB entry for MARCH4 Pharmacogenomics, SNPs, Pathways
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About This Section Patent Information for MARCH4 gene: Search GeneIP for patents involving MARCH4 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor MARCH4 gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
Browse OriGene Antibodies OriGene shRNA RFP for MARCH4 OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for MARCH4 OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for MARCH4 OriGene Protein Over-expression Lysate for MARCH4 Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for MARCH4 OriGene 3'-UTR Clone for MARCH4 OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for MARCH4 OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for MARCH4 Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs Browse OriGene full length recombinant human proteins expressed in human HEK293 cells OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for MARCH4 OriGene Custom Protein Services for MARCH4 OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat MARCH4 QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing MARCH4 QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat MARCH4 QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat MARCH4 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat MARCH4 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat MARCH4
Search Tocris compounds for MARCH4
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MARCH4
ThermoFisher Antibodies for MARCH4
Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat MARCH4
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