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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

MAPKBP1 Gene

protein-coding   GIFtS: 49
GCID: GC15P042067

mitogen-activated protein kinase binding protein 1

(Previous name: mitogen activated protein kinase binding protein 1 )
 Explore 2 diseases affiliated with
MAPKBP1 via our new
 Human Malady Compendium 
Biological research products
for MAPKBP1
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Mitogen-Activated Protein Kinase Binding Protein 11 2     JNK-Binding Protein 12 3
Mitogen Activated Protein Kinase Binding Protein 11 2     Mitogen-Activated Protein Kinase-Binding Protein 12
KIAA05961 3     JNKBP13
JNKBP-12 3     

External Ids:    HGNC: 295361   Entrez Gene: 230052   Ensembl: ENSG000001378027   UniProtKB: O603363   

Export aliases for MAPKBP1 gene to outside databases

Previous GC identifers: GC15P037434 GC15P034962 GC15P039645 GC15P039782 GC15P039855 GC15P018915


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

UniProtKB/Swiss-Prot: MABP1_HUMAN, O60336
Function: Involved in JNK signaling pathway (By similarity)




(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000015.9  NC_018926.1  NT_010194.17  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the MAPKBP1 gene promoter:
         Nkx3-1   HFH-3   Brachyury   SREBP-1c   SREBP-1b   Evi-1   AREB6   FOXI1   SREBP-1a   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidMAPKBP1 promoter sequence
   Search SABiosciences Chromatin IP Primers for MAPKBP1

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat MAPKBP1


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 15q15.1   Ensembl cytogenetic band:  15q15.1   HGNC cytogenetic band: 15q15.1

MAPKBP1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
MAPKBP1 gene location

GeneLoc information about chromosome 15         GeneLoc Exon Structure

GeneLoc location for GC15P042067:  view genomic region     (about GC identifiers)

Start:
42,066,632 bp from pter      End:
42,120,053 bp from pter
Size:
53,422 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: MABP1_HUMAN, O60336 (See protein sequence)
Recommended Name: Mitogen-activated protein kinase-binding protein 1  
Size: 1514 amino acids; 163818 Da
Subunit: Interacts with MAPK10 (By similarity)
Sequence caution: Sequence=BAA25522.2; Type=Erroneous initiation;
Secondary accessions: A6NM93 A8K8P9 Q14CB5 Q14CD8 Q49AJ8 Q5W9G9
Alternative splicing: 6 isoforms:  O60336-1   O60336-2   O60336-3   O60336-4   O60336-5   O60336-6   (No experimental confirmation available)

Explore the universe of human proteins at neXtProt for MAPKBP1: NX_O60336

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_O60336

  • MAPKBP1 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins (3 alternative transcripts): 
    NP_001122080.1  NP_001252540.1  NP_055809.2  

    ENSEMBL proteins: 
     ENSP00000427582   ENSP00000397570   ENSP00000421891   ENSP00000393099   ENSP00000426154  
     ENSP00000422132   ENSP00000221214   ENSP00000260357  

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    Uscn Proteins for MAPKBP1


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    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    MAPKBP1 for domains           About GeneDecksing

    3 InterPro domains/families:
     IPR001680 WD40_repeat
     IPR017986 WD40_repeat_dom
     IPR015943 WD40/YVTN_repeat-like_dom

    Graphical View of Domain Structure for InterPro Entry O60336

    ProtoNet protein and cluster: O60336

    UniProtKB/Swiss-Prot: MABP1_HUMAN, O60336
    Similarity: Contains 12 WD repeats


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: MABP1_HUMAN, O60336
    Function: Involved in JNK signaling pathway (By similarity)

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    Inhib. RNA
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    Gene Ontology (GO): 1 molecular function term (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005515protein binding ----


    MAPKBP1 for ontologies           About GeneDecksing


    1 GenomeRNAi human phenotype for MAPKBP1:
     Decreased viability of wild-ty 


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section



    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for MAPKBP1

    5/7 Interacting proteins for MAPKBP1 (O603362, 3) via UniProtKB, MINT, STRING, and/or I2D (see all 7)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    APTXQ7Z2E32, 3MINT-2870118 I2D: score=3 
    MAPK10P537793I2D: score=3 
    MAPK9P459843I2D: score=3 
    MAPK8P459833I2D: score=2 
    MAP3K7O433183I2D: score=1 
    About this table

    Gene Ontology (GO): 1 biological process term (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0007256activation of JNKK activity IEA--


    MAPKBP1 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for MAPKBP1
    Search CenterWatch for drugs/clinical trials and news about MAPKBP1 / MABP1 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for MAPKBP1 gene (3 alternative transcripts): 
    NM_001128608.1  NM_001265611.1  NM_014994.2  

    Unigene Cluster for MAPKBP1:

    Mitogen-activated protein kinase binding protein 1
    Hs.513661  [show with all ESTs]
    Unigene Representative Sequence: NM_001128608
    18 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000512970 ENST00000457542(uc001zok.4 uc001zoj.4 uc010bcj.3 uc010bci.3 uc010udb.2 uc010bck.3 uc010bcl.3)
    ENST00000505373 ENST00000456763 ENST00000514566 ENST00000502292 ENST00000510535
    ENST00000505061 ENST00000507762 ENST00000515164 ENST00000507147 ENST00000503526
    ENST00000508050 ENST00000506301 ENST00000502695 ENST00000512433 ENST00000221214
    ENST00000260357

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    8/53 QIAGEN miScript miRNA Assays for microRNAs that regulate MAPKBP1 (see all 53):
    hsa-miR-607 hsa-miR-3194-5p hsa-miR-485-3p hsa-miR-29a hsa-miR-3138 hsa-miR-486-3p hsa-miR-650 hsa-miR-105
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    Inhib. RNA
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    Additional cDNA sequence: 

    AB011168.2 AB177850.1 AK091616.1 AK292414.1 AK302482.1 AL833267.1 AL834413.1 BC111090.1 
    BC113983.1 BC114493.1 BX648786.1 NR_049761.1 NR_049762.1 

    19 DOTS entries:

    DT.100814991  DT.409769  DT.97836514  DT.95366070  DT.97767632  DT.411781  DT.100711128  DT.100036105 
    DT.102823467  DT.75117545  DT.91663210  DT.100814990  DT.95366069  DT.121073181  DT.70100075  DT.91714025 
    DT.97783563  DT.100036106  DT.91653804 

    24/91 AceView cDNA sequences (see all 91):

    BQ959299 CK904274 BM476443 CR609233 AI368862 AL046558 CA312846 AL079848 
    BQ045172 AL043360 CO245500 BX489812 AI350720 BG744410 BG675754 BC036660 
    BX354967 BX415355 D80617 BM018726 AU140717 BM457135 BM978422 BM559468 

    GeneLoc Exon Structure

    5/13 Alternative Splicing Database (ASD) splice patterns (SP) for MAPKBP1 (see all 13)    About this scheme

    ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12a · 12b ^ 13a · 13b ^ 14 ^ 15 ^ 16a · 16b ^ 17a · 17b ^ 18a · 18b · 18c ^ 19 ^ 20a ·
    SP1:                                                                                                                                                            
    SP2:                                                                                                                                -           -     -         
    SP3:                                                                                                                                                            
    SP4:                                                                                                                                                            
    SP5:                                                                                                                                                            

    ExUns: 20b ^ 21a · 21b ^ 22a · 22b · 22c · 22d ^ 23a · 23b ^ 24a · 24b ^ 25a · 25b ^ 26 ^ 27 ^ 28 ^ 29
    SP1:                                                                                                      
    SP2:                                                                                                      
    SP3:                                                                                                      
    SP4:                                                                                                      
    SP5:                                                                                                      


    ECgene alternative splicing isoforms for MAPKBP1

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    MAPKBP1 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: GGGCGGGGGC

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image

    MAPKBP1 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table
    Stem Cell Differentiation: 1 LifeMap Cell 
    NameCategory
    PureStem™ progenitor Z1 (Embryonic Progenitor Cell)
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization

    See MAPKBP1 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for MAPKBP1

    SOURCE GeneReport for Unigene cluster: Hs.513661
        SABiosciences Custom PCR Arrays for MAPKBP1
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    In Situ
    Assay Products:
     

     
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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of eukaryotes.

    Orthologs for MAPKBP1 gene from 6/22 species (see all 22)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves MAPKBP11 mitogen activated protein kinase binding protein 1 66.06(n)
    67.63(a)
      771487  XM_003641348.1  XP_003641396.1 
    lizard
    (Anolis carolinensis)
    Reptilia MAPKBP16
    --
    65(a)
    1 ↔ 1
    1(40873601-40927600)
    zebrafish
    (Danio rerio)
    Actinopterygii LOC1005353861 mitogen-activated protein kinase-binding protein 1-like 66.63(n)
    66.7(a)
      100535386  XM_003200317.1  XP_003200365.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta CG73376
    --
    19(a)
    1 → many
    2L(1884622-1944289)
    worm
    (Caenorhabditis elegans)
    Secernentea H24G06.16
    Protein H24G06.1, isoform d
    11(a)
    1 → many
    V(9446149-9460615)
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons AT3G090806
    transducin/WD40 domain-containing protein
    20(a)
    1 → many
    3(2776259-2781785)


    ENSEMBL Gene Tree for MAPKBP1 (if available)
    TreeFam Gene Tree for MAPKBP1 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for MAPKBP1 gene
    EML32  EML52  WDR162  EML12  EML22  WDR622  EML42  EML62  
    WDR902  
    1 SIMAP similar gene for MAPKBP1 using alignment to 7 protein entries:     MABP1_HUMAN (see all proteins):
    WDR62

    MAPKBP1 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/858 NCBI SNPs in MAPKBP1 are shown (see all 858    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 15 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1870473841,2
    --42064694(+) GTGGCA/GCGTGC 5 -- us2k10--------
    rs1444405321,2
    --42064708(+) TAATCC/TCAGCT 5 -- us2k10--------
    rs1898434671,2
    --42064781(+) GATCGC/TCACTG 5 -- us2k10--------
    rs680257531,2
    C--42064821(+) AAAAA-/AAA   
      AAAAAA
    AAAAA
    5 -- us2k11Minor allele frequency- AAAAAAAAA:0.00NA 2
    rs569428101,2
    F,--42065017(+) ATGATC/TTGGAG 5 -- us2k11Minor allele frequency- T:0.07WA 118
    rs1459646371,2
    --42065035(+) GGGACA/GGCTCT 5 -- us2k10--------
    rs1398805381,2
    --42065215(+) GTAGCC/TAATGG 5 -- us2k10--------
    rs1164877771,2
    --42065220(+) TAATGG/CTTCTT 5 -- us2k11Minor allele frequency- C:0.01WA 118
    rs1825202861,2
    --42065230(+) TGCCTC/TCTTCT 5 -- us2k10--------
    rs1861651751,2
    --42065231(+) GCCTTC/TTTCTT 5 -- us2k10--------

    HapMap Linkage Disequilibrium report for MAPKBP1 (42066632 - 42120053 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 3 variations for MAPKBP1
         2 CNVs: 3078 30707
         1 Indel: 33284

    SABiosciences Cancer Mutation PCR Assays
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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    MAPKBP1 for disorders           About GeneDecksing

    2 diseases for MAPKBP1:    About MalaCards
    ataxia    malaria

    Human Genome Epidemiology (HuGE) Navigator: MAPKBP1 (4 documents)

    Export disorders for MAPKBP1 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
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    PubMed articles for MAPKBP1 gene, integrated from 9 sources (see all 13):
    (articles sorted by number of sources associating them with MAPKBP1)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Prediction of the coding sequences of unidentified human genes. IX. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro. (PubMed id 9628581)1, 2, 3 Nagase T....Ohara O. (1998)
    2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (2004)
    3. Alternative splice variants encoding unstable protein domains exist in the human brain. (PubMed id 15491607)1, 2 Homma K.... Nishikawa K. (2004)
    4. A novel Jun N-terminal kinase (JNK)-binding protein that enhances the activation of JNK by MEK kinase 1 and TGF-beta-activated kinase 1. (PubMed id 10471813)1, 3 Koyano S....Yoshioka K. (1999)
    5. The c-Jun N-terminal kinase (JNK)-binding protein (JNK BP1) acts as a negative regulator of NOD2 protein signaling by inhibiting its ol igomerization process. (PubMed id 22700971)1 Lecat A....Legrand-Poels S. (2012)
    6. Variation at the NFATC2 locus increases the risk of t hiazolidinedione-induced edema in the Diabetes REduction Assessment with ramipr il and rosiglitazone Medication (DREAM) study. (PubMed id 20628086)1 Bailey S.D....Anand S. (2010)
    7. Gene-centric association signals for lipids and apoli poproteins identified via the HumanCVD BeadChip. (PubMed id 19913121)1 Talmud P.J.... . (2009)
    8. The full-ORF clone resource of the German cDNA consortium. (PubMed id 17974005)2 Bechtel S.... Schupp I. (2007)
    9. Analysis of the DNA sequence and duplication history of human chromosome 15. (PubMed id 16572171)2 Zody M.C....Nusbaum C. (2006)
    10. A protein-protein interaction network for human inherited ataxias and disorders of Purkinje cell degeneration. (PubMed id 16713569)1 Lim J.... Zoghbi H.Y. (2006)

    (in PubMed, OMIM, and NCBI Bookshelf)
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    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 23005 HGNC: 29536 AceView: MAPKBP1 Ensembl:ENSG00000137802 euGenes: HUgn23005
    ECgene: MAPKBP1 H-InvDB: MAPKBP1

    (According to HUGE)
    About This Section
    HUGE: KIAA0596

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for MAPKBP1 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for MAPKBP1 gene:
    Search GeneIP for patents involving MAPKBP1

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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    GeneCards Homepage - Last full update: 19 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 26 Apr 2013

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