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Aliases for MAPKAPK5-AS1 Gene

Subcategory (RNA class) for MAPKAPK5-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for MAPKAPK5-AS1 Gene

  • MAPKAPK5 Antisense RNA 1 2 3 4
  • MAPKAPK5 Antisense RNA 1 (Non-Protein Coding) 2 3
  • C12orf47 3 4
  • Chromosome 12 Open Reading Frame 47 2
  • MAPKAPK5 Antisense Gene Protein 1 4
  • Apoptosis-Related Protein PNAS-1 3

External Ids for MAPKAPK5-AS1 Gene

ORGUL Members for MAPKAPK5-AS1 Gene

Previous HGNC Symbols for MAPKAPK5-AS1 Gene

  • C12orf47

Previous GeneCards Identifiers for MAPKAPK5-AS1 Gene

  • GC12M112279

Summaries for MAPKAPK5-AS1 Gene

GeneCards Summary for MAPKAPK5-AS1 Gene

MAPKAPK5-AS1 (MAPKAPK5 Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MAPKAPK5-AS1 Gene

Genomics for MAPKAPK5-AS1 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for MAPKAPK5-AS1 Gene

Start:
111,839,764 bp from pter
End:
111,842,902 bp from pter
Size:
3,139 bases
Orientation:
Minus strand

Genomic View for MAPKAPK5-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MAPKAPK5-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MAPKAPK5-AS1 Gene

No data available for Regulatory Elements for MAPKAPK5-AS1 Gene

Proteins for MAPKAPK5-AS1 Gene

  • Protein details for MAPKAPK5-AS1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8N8E1-MAAS1_HUMAN
    Recommended name:
    Putative uncharacterized protein encoded by MAPKAPK5-AS1
    Protein Accession:
    Q8N8E1
    Secondary Accessions:

    Protein attributes for MAPKAPK5-AS1 Gene

    Size:
    139 amino acids
    Molecular mass:
    13175 Da
    Quaternary structure:
    No Data Available

neXtProt entry for MAPKAPK5-AS1 Gene

Proteomics data for MAPKAPK5-AS1 Gene at MOPED

Post-translational modifications for MAPKAPK5-AS1 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for MAPKAPK5-AS1 Gene

Domains for MAPKAPK5-AS1 Gene

Protein Domains for MAPKAPK5-AS1 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MAPKAPK5-AS1: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MAPKAPK5-AS1 Gene

Function for MAPKAPK5-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MAPKAPK5-AS1 Gene

Localization for MAPKAPK5-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MAPKAPK5-AS1 Gene

Pathways for MAPKAPK5-AS1 Gene

SuperPathways for MAPKAPK5-AS1 Gene

No Data Available

Interacting Proteins for MAPKAPK5-AS1 Gene

Gene Ontology (GO) - Biological Process for MAPKAPK5-AS1 Gene

None

No data available for Pathways by source for MAPKAPK5-AS1 Gene

Transcripts for MAPKAPK5-AS1 Gene

mRNA/cDNA for MAPKAPK5-AS1 Gene

Unigene Clusters for MAPKAPK5-AS1 Gene

MAPKAPK5 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MAPKAPK5-AS1 Gene

No ASD Table

Relevant External Links for MAPKAPK5-AS1 Gene

GeneLoc Exon Structure for
MAPKAPK5-AS1
ECgene alternative splicing isoforms for
MAPKAPK5-AS1

Expression for MAPKAPK5-AS1 Gene

mRNA expression in normal human tissues for MAPKAPK5-AS1 Gene

SOURCE GeneReport for Unigene cluster for MAPKAPK5-AS1 Gene Hs.333120

genes like me logo Genes that share expressions with MAPKAPK5-AS1: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for MAPKAPK5-AS1 Gene

Orthologs for MAPKAPK5-AS1 Gene

Evolution for MAPKAPK5-AS1 Gene

ENSEMBL:
Gene Tree for MAPKAPK5-AS1 (if available)
TreeFam:
Gene Tree for MAPKAPK5-AS1 (if available)

No data available for Orthologs for MAPKAPK5-AS1 Gene

Paralogs for MAPKAPK5-AS1 Gene

No data available for Paralogs for MAPKAPK5-AS1 Gene

Variants for MAPKAPK5-AS1 Gene

Sequence variations from dbSNP and Humsavar for MAPKAPK5-AS1 Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type MAF
rs3177647 -- 111,839,772(-) TGACC(A/G)TTTAC nc-transcript-variant
rs6489810 -- 111,839,602(+) CATTA(C/T)TTTTA downstream-variant-500B
rs11547221 -- 111,839,876(+) GGCCT(C/T)GCCTT nc-transcript-variant
rs12370770 -- 111,839,280(+) tccgc(C/T)tcaaa downstream-variant-500B
rs34067589 -- 111,840,034(+) CACTT(-/A)AAATT nc-transcript-variant

Relevant External Links for MAPKAPK5-AS1 Gene

HapMap Linkage Disequilibrium report
MAPKAPK5-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for MAPKAPK5-AS1 Gene

Disorders for MAPKAPK5-AS1 Gene

No disorders were found for MAPKAPK5-AS1 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for MAPKAPK5-AS1 Gene

Publications for MAPKAPK5-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. The finished DNA sequence of human chromosome 12. (PMID: 16541075) Scherer S.E. … Gibbs R.A. (Nature 2006) 4

Products for MAPKAPK5-AS1 Gene

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
  • QIAGEN qRT-PCR Assays for microRNAs that regulate MAPKAPK5-AS1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for MAPKAPK5-AS1
    • Block miRNA regulation of MAPKAPK5-AS1 using miScript Target Protectors

    Sources for MAPKAPK5-AS1 Gene

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