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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

MAPKAP1 Gene

protein-coding   GIFtS: 56
GCID: GC09M128199

mitogen-activated protein kinase associated protein 1

 Explore 17 diseases affiliated with
MAPKAP1 via our new
 Human Malady Compendium 
Biological research products
for MAPKAP1
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Mitogen-Activated Protein Kinase Associated Protein 11 2     JC3102
MIP11 2 3     SIN1b2
SIN11 2 3     SIN1g2
Mitogen-Activated Protein Kinase 2-Associated Protein 12 3     MEKK2-Interacting Protein 12
Stress-Activated Map Kinase-Interacting Protein 12 3     Ras Inhibitor MGC27452
MSIN11     Stress-Activated Map Kinase Interacting Protein 12
SAPK-Interacting Protein 12 3     Stress-Activated Protein Kinase-Interacting 12
TORC2 Subunit MAPKAP12 3     Target Of Rapamycin Complex 2 Subunit MAPKAP12
MGC27451     

External Ids:    HGNC: 187521   Entrez Gene: 791092   Ensembl: ENSG000001194877   OMIM: 6105585   UniProtKB: Q9BPZ73   

Export aliases for MAPKAP1 gene to outside databases

Previous GC identifers: GC09M119314 GC09M119846 GC09M121653 GC09M123576 GC09M125280 GC09M127239 GC09M097812


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for MAPKAP1:
This gene encodes a protein that is highly similar to the yeast SIN1 protein, a stress-activated protein kinase.
Alternatively spliced transcript variants encoding distinct isoforms have been described. Alternate polyadenylation
sites as well as alternate 3' UTRs have been identified for transcripts of this gene. (provided by RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: SIN1_HUMAN, Q9BPZ7
Function: Subunit of mTORC2, which regulates cell growth and survival in response to hormonal signals. mTORC2 is
activated by growth factors, but, in contrast to mTORC1, seems to be nutrient-insensitive. mTORC2 seems to function
upstream of Rho GTPases to regulate the actin cytoskeleton, probably by activating one or more Rho-type guanine
nucleotide exchange factors. mTORC2 promotes the serum-induced formation of stress-fibers or F-actin. mTORC2 plays a
critical role in AKT1 'Ser-473' phosphorylation, which may facilitate the phosphorylation of the activation loop of
AKT1 on 'Thr-308' by PDK1 which is a prerequisite for full activation. mTORC2 regulates the phosphorylation of SGK1 at
'Ser-422'. mTORC2 also modulates the phosphorylation of PRKCA on 'Ser-657'. Within mTORC2, MAPKAP1 is required for
complex formation and mTORC2 kinase activity. MAPKAP1 inhibits MAP3K2 by preventing its dimerization and
autophosphorylation. Inhibits HRAS and KRAS signaling. Enhances osmotic stress-induced phosphorylation of ATF2 and
ATF2-mediated transcription

Gene Wiki entry for MAPKAP1


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000009.11  NC_018920.1  NT_008470.19  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the MAPKAP1 gene promoter:
         ATF-2   c-Jun   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmids (see all 2): MAPKAP1 promoter sequence
   Search SABiosciences Chromatin IP Primers for MAPKAP1

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat MAPKAP1


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 9q33.3   Ensembl cytogenetic band:  9q33.3   HGNC cytogenetic band: 9q34.11

MAPKAP1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
MAPKAP1 gene location

GeneLoc information about chromosome 9         GeneLoc Exon Structure

GeneLoc location for GC09M128199:  view genomic region     (about GC identifiers)

Start:
128,199,672 bp from pter      End:
128,469,513 bp from pter
Size:
269,842 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: SIN1_HUMAN, Q9BPZ7 (See protein sequence)
Recommended Name: Target of rapamycin complex 2 subunit MAPKAP1  
Size: 522 amino acids; 59123 Da
Subunit: Interacts with IFNAR2 (By similarity). All isoforms except isoform 4 can be incorporated into the mammalian
target of rapamycin complex 2 (mTORC2) which contains MTOR, MLST8, PRR5, RICTOR, MAPKAP1 and DEPTOR. Contrary to
mTORC1, mTORC2 does not bind to and is not sensitive to FKBP12-rapamycin. Interacts with ATF2, MAP3K2 and MAPK8.
Interacts with GTP-bound HRAS and KRAS. Interacts with SGK1 (By similarity)
Subcellular location: Cell membrane; Peripheral membrane protein. Cytoplasmic vesicle. Nucleus
1 PDB 3D structure from and Proteopedia for MAPKAP1:
3VOQ (3D)    
Secondary accessions: A8K1Z5 B1AMA4 B7Z309 Q00426 Q5JSV5 Q5JSV6 Q5JSV9 Q658R0 Q699U1 Q699U2 Q699U3
Q699U4 Q6GVJ0 Q6GVJ1 Q6GVJ2
Alternative splicing: 6 isoforms:  Q9BPZ7-1   Q9BPZ7-2   Q9BPZ7-3   Q9BPZ7-4   Q9BPZ7-5   Q9BPZ7-6   (Not involved in a TORC2 complex)

Explore the universe of human proteins at neXtProt for MAPKAP1: NX_Q9BPZ7

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q9BPZ7

  • MAPKAP1 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins (6 alternative transcripts): 
    NP_001006618.1  NP_001006619.1  NP_001006620.1  NP_001006621.1  NP_001006622.1  NP_077022.1  

    ENSEMBL proteins: 
     ENSP00000362610   ENSP00000265961   ENSP00000362602   ENSP00000362597   ENSP00000412485  
     ENSP00000418607   ENSP00000400182   ENSP00000377624   ENSP00000408359   ENSP00000417766  
     ENSP00000362595   ENSP00000390024   ENSP00000265960   ENSP00000377627   ENSP00000362596  
    Reactome Protein details: Q9BPZ7
    Human Recombinant Protein Products: 
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    Novus Biologicals MAPKAP1 Proteins
    Novus Biologicals MAPKAP1 Lysates
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    Uscn Proteins for MAPKAP1

    Gene Ontology (GO): 4 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005634nucleus IEA--
    GO:0005829cytosol TAS--
    GO:0005886plasma membrane IEA--
    GO:0016023cytoplasmic membrane-bounded vesicle IEA--


    MAPKAP1 for ontologies           About GeneDecksing



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    Uscn ELISAs and CLIAs for MAPKAP1


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    MAPKAP1 for domains           About GeneDecksing

    1 InterPro domain/family:
     IPR008828 SIN1

    Graphical View of Domain Structure for InterPro Entry Q9BPZ7

    ProtoNet protein and cluster: Q9BPZ7

    1 Blocks protein family: IPB008828 Stress-activated map kinase interacting 1

    UniProtKB/Swiss-Prot: SIN1_HUMAN, Q9BPZ7
    Similarity: Belongs to the SIN1 family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: SIN1_HUMAN, Q9BPZ7
    Function: Subunit of mTORC2, which regulates cell growth and survival in response to hormonal signals. mTORC2 is
    activated by growth factors, but, in contrast to mTORC1, seems to be nutrient-insensitive. mTORC2 seems to function
    upstream of Rho GTPases to regulate the actin cytoskeleton, probably by activating one or more Rho-type guanine
    nucleotide exchange factors. mTORC2 promotes the serum-induced formation of stress-fibers or F-actin. mTORC2 plays a
    critical role in AKT1 'Ser-473' phosphorylation, which may facilitate the phosphorylation of the activation loop of
    AKT1 on 'Thr-308' by PDK1 which is a prerequisite for full activation. mTORC2 regulates the phosphorylation of SGK1 at
    'Ser-422'. mTORC2 also modulates the phosphorylation of PRKCA on 'Ser-657'. Within mTORC2, MAPKAP1 is required for
    complex formation and mTORC2 kinase activity. MAPKAP1 inhibits MAP3K2 by preventing its dimerization and
    autophosphorylation. Inhibits HRAS and KRAS signaling. Enhances osmotic stress-induced phosphorylation of ATF2 and
    ATF2-mediated transcription

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    8/28 QIAGEN miScript miRNA Assays for microRNAs that regulate MAPKAP1 (see all 28):
    hsa-miR-607 hsa-miR-16-2* hsa-miR-605 hsa-miR-132 hsa-miR-520a-5p hsa-miR-759 hsa-miR-1273d hsa-miR-214*
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    Inhib. RNA
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    Gene Ontology (GO): 3 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005515protein binding ----
    GO:0016301kinase activity ----
    GO:0017016Ras GTPase binding NAS1849280


    MAPKAP1 for ontologies           About GeneDecksing


    1 GenomeRNAi human phenotype for MAPKAP1:
     Decreased viability 

    Animal Models:
         2 MGI mutant phenotypes (inferred from 2 alleles(MGI details for Mapkap1):
     cellular  mortality/aging 

    MAPKAP1 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/13 super-pathways (see all 13About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Signaling by FGFR
    8/12 pathways (see all 12)
    Signaling by FGFR1.00
    DAP12 signaling0.83
    Downstream signaling of activated FGFR0.92
    Signaling by EGFR in Cancer0.83
    Signaling by FGFR in disease0.91
    DAP12 interactions0.76
    Signaling by ERBB20.89
    Signaling by PDGF0.72
    2PIP3 activates AKT signaling
    8/10 pathways (see all 10)
    PIP3 activates AKT signaling1.00
    PI3K/AKT activation0.97
    PI3K/AKT Signaling in Cancer1.00
    GAB1 signalosome0.96
    PI3K events in ERBB2 signaling1.00
    Constitutive PI3K/AKT Signaling in Cancer0.88
    PI3K events in ERBB4 signaling1.00
    Signaling by SCF-KIT0.72
    3Immune System
    Immune System1.00
    Innate Immune System0.46
    Adaptive Immune System0.59
    4CD28 co-stimulation
    CD28 co-stimulation1.00
    Costimulation by the CD28 family0.41
    CD28 dependent PI3K/Akt signaling0.66
    5Signaling by the B Cell Receptor (BCR)
    Signaling by the B Cell Receptor (BCR)1.00
    Downstream Signaling Events Of B Cell Receptor (BCR)0.81

    Pathway sources
    See GeneCards unified pathways
    Show all pathways


    5/6 BioSystems Pathways for MAPKAP1 (see all 6
        TOR signaling
    ErbB1 downstream signaling
    CXCR4-mediated signaling events
    mTOR signaling pathway
    CXCR3-mediated signaling events

    5/32        Reactome Pathways for MAPKAP1 (see all 32)
        Costimulation by the CD28 family
    Signaling by EGFR in Cancer
    Downstream signal transduction
    Signal Transduction
    Signaling by PDGF



    MAPKAP1 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for MAPKAP1

    STRING Interaction Network Preview (showing 5 interactants - click image to see 24)

    5/37 Interacting proteins for MAPKAP1 (Q9BPZ72, 3 ENSP000002659604) via UniProtKB, MINT, STRING, and/or I2D (see all 37)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    RICTORQ6R3272, 3, ENSP000003499594MINT-7556061 MINT-6948596 MINT-7556024 MINT-8088269 MINT-8088291 MINT-6948610 MINT-7556076 MINT-8150419 I2D: score=4 STRING: ENSP00000349959
    MTORP423452, 3, ENSP000003545584MINT-7556061 MINT-6948596 MINT-7556024 MINT-8088269 MINT-8088291 MINT-6948610 MINT-7556076 MINT-8150419 I2D: score=4 STRING: ENSP00000354558
    RPTORQ8N1222, 3, ENSP000003072724MINT-7556024 MINT-8150419 I2D: score=1 STRING: ENSP00000307272
    CDC42EP1Q005872, 3, ENSP000002490144MINT-67645 I2D: score=6 STRING: ENSP00000249014
    SFNP319472, 3MINT-3975485 I2D: score=2 
    About this table

    Gene Ontology (GO): 5/7 biological process terms (GO ID links to tree view) (see all 7):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006950response to stress IEA--
    GO:0007173epidermal growth factor receptor signaling pathway TAS--
    GO:0008150biological_process ND--
    GO:0008543fibroblast growth factor receptor signaling pathway TAS--
    GO:0031295T cell costimulation TAS--


    MAPKAP1 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    MAPKAP1 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for MAPKAP1

    1 HMDB Compound for MAPKAP1    About this table
    CompoundSynonyms CAS #PubMed Ids
    Guanosine triphosphate5'-GTP (see all 10)86-01-1--
    2 Novoseek chemical compound relationships for MAPKAP1 gene    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    sin-1 87.9 32 17303383 (7), 18687895 (7), 15363842 (2)
    rantes 62.5 1 10940894 (1)

    Search CenterWatch for drugs/clinical trials and news about MAPKAP1 / SIN1 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for MAPKAP1 gene (6 alternative transcripts): 
    NM_001006617.1  NM_001006618.1  NM_001006619.1  NM_001006620.1  NM_001006621.1  NM_024117.3  

    Unigene Cluster for MAPKAP1:

    Mitogen-activated protein kinase associated protein 1
    Hs.495138  [show with all ESTs]
    Unigene Representative Sequence: NM_001006617
    18/21 Ensembl transcripts including schematic representations, and UCSC links where relevant (see all 21):
    ENST00000373511 ENST00000350766 ENST00000373503 ENST00000373498 ENST00000483937
    ENST00000444226 ENST00000497932 ENST00000496658 ENST00000496063 ENST00000420643
    ENST00000473837(uc010mxb.1) ENST00000394060(uc004bqa.3) ENST00000427078(uc010mxc.1)
    ENST00000437973 ENST00000468896 ENST00000448439 ENST00000373496 ENST00000433483


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    hsa-miR-607 hsa-miR-16-2* hsa-miR-605 hsa-miR-132 hsa-miR-520a-5p hsa-miR-759 hsa-miR-1273d hsa-miR-214*
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    Additional cDNA sequence: 

    AK290060.1 AK295364.1 AK298841.1 AK309507.1 AK310361.1 AK316149.1 AL833042.1 AY425957.1 
    AY524429.1 AY524430.1 AY524431.1 AY524432.1 AY633624.1 AY633625.1 AY633626.1 BC002326.2 
    BC003044.1 BC035236.1 M37191.1 

    24 DOTS entries:

    DT.452044  DT.95263279  DT.97787260  DT.100823123  DT.92444889  DT.121146878  DT.100823130  DT.100823131 
    DT.121146949  DT.97862546  DT.100823129  DT.100823125  DT.101984665  DT.121146985  DT.99942775  DT.206813 
    DT.92444870  DT.95226049  DT.121146900  DT.121146914  DT.91747111  DT.92444866  DT.92444879  DT.100753399 

    24/478 AceView cDNA sequences (see all 478):

    BM745870 BM717650 BC035236 BF739907 CA312318 AW852183 CA445702 BI754253 
    BM915367 BQ635959 AI277355 AI289599 BM469959 AY524430 AW377520 BE280180 
    BC002326 BQ215660 BI523605 BI334265 BM800437 AY524431 BX096366 AA291156 

    GeneLoc Exon Structure

    4 Alternative Splicing Database (ASD) splice patterns (SP) for MAPKAP1    About this scheme

    ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8a · 8b ^ 9 ^ 10 ^ 11 ^ 12 ^ 13a · 13b
    SP1:                                                                                                
    SP2:                                                        -     -                                 
    SP3:                                                        -     -     -                           
    SP4:                                                  -     -     -                                 


    ECgene alternative splicing isoforms for MAPKAP1

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    MAPKAP1 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: CTGATGAATT

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See MAPKAP1 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for MAPKAP1

    SOURCE GeneReport for Unigene cluster: Hs.495138

    UniProtKB/Swiss-Prot: SIN1_HUMAN, Q9BPZ7
    Tissue specificity: Ubiquitously expressed, with highest levels in heart and skeletal muscle

        SABiosciences Expression via Pathway-Focused PCR Array including MAPKAP1: 
              mTOR Signaling in human mouse rat

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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for MAPKAP1 gene from 7/23 species (see all 23)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Mapkap11 , 5 mitogen-activated protein kinase associated protein more1, 5 92.46(n)1
    97.13(a)1
      2 (22.84 cM)5
    2277431  NM_177345.31  NP_796319.11 
     344067715 
    chicken
    (Gallus gallus)
    Aves MAPKAP11 mitogen-activated protein kinase associated protein more 82.76(n)
    89.85(a)
      395627  NM_204826.1  NP_990157.1 
    lizard
    (Anolis carolinensis)
    Reptilia MAPKAP16
    --
    87(a)
    1 ↔ 1
    GL343535.1(269482-449929)
    African clawed frog
    (Xenopus laevis)
    Amphibia mapkap1-prov2 mitogen-activated protein kinase associated protein more 77.76(n)    BC043789.1 
    zebrafish
    (Danio rerio)
    Actinopterygii LOC1005371961 target of rapamycin complex 2 subunit MAPKAP1-like 74.81(n)
    82.88(a)
      100537196  XM_003198574.1  XP_003198622.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta Sin11 SAPK-interacting protein 1 43.32(n)
    33.19(a)
      36604  NM_137119.3  NP_610963.1 
    worm
    (Caenorhabditis elegans)
    Secernentea sinh-16
    Stress-activated map kinase-interacting protein 1 ...
    18(a)
    1 ↔ 1
    II(12228255-12236510)


    ENSEMBL Gene Tree for MAPKAP1 (if available)
    TreeFam Gene Tree for MAPKAP1 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
      --

    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/4104 NCBI SNPs in MAPKAP1 are shown (see all 4104    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 9 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1137792701,2
    C,F,--128199229(+) AGCCCG/ATGCCG 5 -- ds50011Minor allele frequency- A:0.03NA 120
    rs1509310821,2
    --128199233(+) CGTGCC/TGGGGA 5 -- ds50010--------
    rs2020702941,2
    --128199300(+) AGGGT-/GGGGGG 5 -- ds50010--------
    rs1407438931,2
    --128199510(+) GAGGGC/TCAGCC 5 -- ds50010--------
    rs605891841,2
    C,--128199542(+) GGCCCC/TGGTGC 5 -- ds50012Minor allele frequency- T:0.08WA 120
    rs1808635511,2
    --128199591(+) TGCCAA/CCACCC 5 -- ds50010--------
    rs1162355741,2
    F,--128199655(+) AAACTC/AAACAC 5 -- ds50011Minor allele frequency- A:0.06WA 118
    rs1501624391,2
    --128199716(+) TATCGA/CATATG 5 -- ut310--------
    rs1467640141,2
    --128199797(+) TCAAAC/TACAGA 5 -- ut310--------
    rs1851554221,2
    --128199837(+) TGGGTA/GGGGGG 5 -- ut310--------

    HapMap Linkage Disequilibrium report for MAPKAP1 (128199672 - 128449672 bp, first 250kb of MAPKAP1)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for MAPKAP1: --

    2 SABiosciences Cancer Mutation PCR Assays for MAPKAP1:
    Cosmic IdAA Change
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    71566p.R81T
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    DNA2.0 Custom Variant and Variant Library Synthesis for MAPKAP1

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    MAPKAP1 for disorders           About GeneDecksing

    OMIM gene information: 610558    OMIM disorders: --

    17 diseases for MAPKAP1:    About MalaCards
    coffin-lowry syndrome    bronchiolitis obliterans organizing pneumonia    bronchiolitis obliterans    bronchiolitis
    osteolysis    renal cell carcinoma    multiple myeloma    polymyositis
    rheumatoid arthritis    myeloma    hematopoiesis    pneumonia
    arthritis    fibrosis    carcinoma    hepatitis
    sepsis

    1 disease from the University of Copenhagen DISEASES database for MAPKAP1:
    Coffin-Lowry syndrome

    2 Novoseek disease relationships for MAPKAP1 gene    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    necrosis 23.6 1 9042178 (1)
    tumors 0 1 9042178 (1)

    Human Genome Epidemiology (HuGE) Navigator: MAPKAP1 (8 documents)

    Export disorders for MAPKAP1 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for MAPKAP1 gene, integrated from 9 sources (see all 52):
    (articles sorted by number of sources associating them with MAPKAP1)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Alternative polyadenylation and splicing of mRNAs transcribed from the human Sin1 gene. (PubMed id 15363842)1, 2, 3, 9 Schroder W.... Sculley T. (2004)
    2. Human Sin1 contains Ras-binding and pleckstrin homology domains and suppresses Ras signalling. (PubMed id 17303383)1, 2, 9 Schroder W.A.... Bushell G. (2007)
    3. Mip1, an MEKK2-interacting protein, controls MEKK2 dimerization and activation. (PubMed id 15988011)1, 2, 9 Cheng J.... Su B. (2005)
    4. Sin1 binds to both ATF-2 and p38 and enhances ATF-2-dependent transcription in an SAPK signaling pathway. (PubMed id 17054722)1, 2 Makino C.... Ishii S. (2006)
    5. SIN1/MIP1 maintains rictor-mTOR complex integrity and regulates Akt phosphorylation and substrate specificity. (PubMed id 16962653)1, 2 Jacinto E....Su B. (2006)
    6. Identification of Sin1 as an essential TORC2 component required for complex formation and kinase activity. (PubMed id 17043309)1, 2 Yang Q....Guan K.L. (2006)
    7. mSin1 is necessary for Akt/PKB phosphorylation, and its isoforms define three distinct mTORC2s. (PubMed id 16919458)1, 2 Frias M.A.... Sabatini D.M. (2006)
    8. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    9. Expression of three mammalian cDNAs that interfere with RAS function in Saccharomyces cerevisiae. (PubMed id 1849280)1, 2 Colicelli J....Wigler M. (1991)
    10. A link between SIN1 (MAPKAP1) and poly(rC) binding protein 2 (PCBP2) in counteracting environmental stress. (PubMed id 18687895)1, 9 Ghosh D....Roberts R.M. (2008)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 79109 HGNC: 18752 AceView: MAPKAP1 Ensembl:ENSG00000119487 euGenes: HUgn79109
    ECgene: MAPKAP1 H-InvDB: MAPKAP1

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for MAPKAP1 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for MAPKAP1 gene:
    Search GeneIP for patents involving MAPKAP1

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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