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MAP10 Gene

protein-coding   GIFtS: 29
GCID: GC01P232941

Microtubule-Associated Protein 10

(Previous name: KIAA1383)
(Previous symbol: KIAA1383)
  Search for MAP10
at  

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, 10fRNAdb, 12H-InvDB, 13NCBI, 14NONCODE, and/or 15RNAdb)
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Aliases
Microtubule-Associated Protein 101 2
KIAA13831 2 3
Microtubule Regulator 120 KDa1 2
Microtubule Regulator Of 120 KDa2 3
MTR1202 3

External Ids:    HGNC: 292651   Entrez Gene: 546272   Ensembl: ENSG000002129167   UniProtKB: Q9P2G43   

Export aliases for MAP10 gene to outside databases


(According to Entrez Gene, GeneCards, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
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GeneCards Summary for MAP10 Gene:
MAP10 (microtubule-associated protein 10) is a protein-coding gene. GO annotations related to this gene include microtubule binding.

UniProtKB/Swiss-Prot: MAP10_HUMAN, Q9P2G4
Function: Microtubule-associated protein (MAP) that plays a role in the regulation of cell division; promotes
microtubule stability and participates in the organization of the spindle midzone and normal progress of
cytokinesis




(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 75), Regulatory elements and Epigenetics data according to QIAGEN, and/or SwitchGear Genomics)
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RefSeq DNA sequence:
NC_000001.11  NC_018912.2  NT_167186.2  
Regulatory elements:
   Search for regulatory transcription factor binding sites for MAP10
         Other transcription factors

Browse SwitchGear Promoter luciferase reporter plasmids
   Search Chromatin IP Primers for MAP10

Epigenetics:
DNA Methylation CpG Assay Predesigned for Pyrosequencing in human, mouse, rat MAP10


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 1q42.2   Ensembl cytogenetic band:  1q42.2   HGNC cytogenetic band: 1q42.2

MAP10 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
MAP10 gene location

GeneLoc information about chromosome 1         GeneLoc Exon Structure

GeneLoc location for GC01P232941:  view genomic region     (about GC identifiers)

Start:
232,940,638 bp from pter      End:
232,946,092 bp from pter
Size:
5,455 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, 2neXtProt, Ensembl, and/or Reactome, Modification sites according to PhosphoSitePlus, Specific Peptides from DME, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Cloud-Clone Corp.,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Cloud-Clone Corp., Antibodies by EMD Millipore, R&D Systems, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, LSBio, Abcam, Cloud-Clone Corp, and/or others.)
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UniProtKB/Swiss-Prot: MAP10_HUMAN, Q9P2G4 (See protein sequence)
Recommended Name: Microtubule-associated protein 10  
Size: 905 amino acids; 100345 Da
Subunit: Interacts (via middle region) with microtubules
Sequence caution: Sequence=BAA92621.1; Type=Erroneous initiation; Note=Translation N-terminally shortened;
Sequence=CAH72001.1; Type=Erroneous initiation; Note=Translation N-terminally shortened;
Secondary accessions: A8K2F1 Q32MI1 Q58EZ9 Q5VV83

Explore the universe of human proteins at neXtProt for MAP10: NX_Q9P2G4

Explore proteomics data for MAP10 at MOPED

Post-translational modifications: 

  • Modification sites at neXtProt
  • Modification sites at PhosphoSitePlus

  • See MAP10 Protein Expression from SPIRE MOPED, PaxDB, and MaxQB

    REFSEQ proteins: NP_061963.2  
    ENSEMBL proteins: 
     ENSP00000403208  

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    (According to HGNC, IUPHAR, InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
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    1 InterPro protein domain:
     IPR026679 MAP10

    Graphical View of Domain Structure for InterPro Entry Q9P2G4

    ProtoNet protein and cluster: Q9P2G4


    MAP10 for domains           About GeneDecksing


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory, genOway,
    transcription factor targeting from QIAGEN and/or HOMER, miRNA Gene Targets from miRTarBase, shRNA from OriGene, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, SwitchGear Genomics, Gene Editing from DNA2.0, Clones from OriGene, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, ESI BIO, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
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    Molecular Function:

         UniProtKB/Swiss-Prot Summary: MAP10_HUMAN, Q9P2G4
    Function: Microtubule-associated protein (MAP) that plays a role in the regulation of cell division; promotes
    microtubule stability and participates in the organization of the spindle midzone and normal progress of
    cytokinesis

         Gene Ontology (GO): 1 molecular function term:    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0008017microtubule binding IDA--
         
    MAP10 for ontologies           About GeneDecksing


    Animal Models:
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    (According to UniProtKB, COMPARTMENTS Subcellular localization database, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
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    Subcellular locations from UniProtKB/Swiss-Prot
    MAP10_HUMAN, Q9P2G4: Cytoplasm, cytoskeleton. Cytoplasm, cytoskeleton, spindle pole. Cytoplasm, cytoskeleton,
    microtubule organizing center, centrosome. Midbody. Note=Localized at stabilized microtubules (MTs) during
    interphase and to the mitotic apparatus during mitosis. Localized at spindle poles in metaphase and spindle
    midzone during telophase. Colocalized with Polo-like kinase PLK1 to the center of spindle midzone. Localized at
    the midbody during cytokinesis. Colocalized with acetylated-tubulin at MTs

    Gene Ontology (GO): 5 cellular component terms:    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005813centrosome IDA--
    GO:0005881cytoplasmic microtubule IDA--
    GO:0030496midbody IDA--
    GO:0097431mitotic spindle pole IDA--
    GO:1990023mitotic spindle midzone IDA--

    MAP10 for ontologies           About GeneDecksing


    (SuperPaths according to PathCards, Pathways according to R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Sino Biological, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to QIAGEN, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene).
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        Custom Pathway & Disease-focused RT2 Profiler PCR Arrays for MAP10
    Interactions:

        Search GeneGlobe Interaction Network for MAP10

    Gene Ontology (GO): 4 biological process terms:    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0031122cytoplasmic microtubule organization IMP--
    GO:0032467positive regulation of cytokinesis IMP--
    GO:0032886regulation of microtubule-based process IMP--
    GO:0051256spindle midzone assembly involved in mitosis IMP--

    MAP10 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience, ApexBio, HMDB, BitterDB, and/or Novoseek, Ligands according to IUPHAR, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB)
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    Browse Small Molecules at EMD Millipore
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    Browse Tocris compounds for MAP10



    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 236 Homo sapiens; Apr 25 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN, SwitchGear Genomics,
    Tagged/untagged cDNA clones from OriGene, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, and/or QIAGEN )
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    REFSEQ mRNAs for MAP10 gene: 
    NM_019090.2  

    Unigene Cluster for MAP10:

    Microtubule-associated protein 10
    Hs.160373  [show with all ESTs]
    Unigene Representative Sequence: NM_019090
    1 Ensembl transcript including schematic representation, and UCSC links where relevant:
    ENST00000418460(uc001hvh.2)
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    Additional mRNA sequence: 

    AB037804.1 AK290216.1 BC036663.2 BC109122.2 

    1 DOTS entry:

    DT.105938 

    17 AceView cDNA sequences:

    AI221351 AB037804 BU948707 AA953977 BC036663 CK902782 AA456057 AI765493 
    CK005203 AW341975 BG529372 AA455422 BE780357 BF674536 AI809365 BI459797 
    AV750450 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, Protein expression images according to data from SPIRE 1MOPED, 2PaxDb, and 3MaxQB, plus additional links to SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from QIAGEN, Primers from OriGene, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
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    MAP10 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS <intensity>2/3
    CGAP TAG: --
    MAP10 Expression
    About this image

    MAP10 Protein expression data from MOPED1, PaxDb2 and MaxQB3    About this image

    MAP10 Protein Expression

    SOURCE GeneReport for Unigene cluster: Hs.160373

    UniProtKB/Swiss-Prot: MAP10_HUMAN, Q9P2G4
    Tissue specificity: Expressed in different cell lines (at protein level)

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    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MAP10

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
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    This gene was present in the common ancestor of chordates.

    Orthologs for MAP10 gene from Selected species (see all 8)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Map101 , 5 RIKEN cDNA 4933403G14 gene5
    microtubule-associated protein 101
    67.11(n)1
    54.92(a)1
      8 (73.65 cM)5
    743931  NM_028908.31  NP_083184.11 
     1256698185 
    chicken
    (Gallus gallus)
    Aves MAP101 microtubule-associated protein 10 48.64(n)
    36.56(a)
      101747480  XM_004935742.1  XP_004935799.1 
    lizard
    (Anolis carolinensis)
    Reptilia MAP106
    microtubule-associated protein 10
    32(a)
    1 ↔ 1
    1(220937628-220940399)


    ENSEMBL Gene Tree for MAP10 (if available)
    TreeFam Gene Tree for MAP10 (if available)

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
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      --

    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, 4UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD), the Human Cytochrome P450 Allele Nomenclature Database, and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers, Cancer Mutation PCR Arrays and Assays, and Copy Number PCR Arrays from QIAGEN)
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    Selected SNPs for MAP10 (see all 237)    About this table    
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 1 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1869862671,2
    --232938659(+) CATGGA/GGAAAA 1 -- us2k10--------
    rs109106231,2
    C,F,A,H--232938699(+) CTTTTG/AGCATT 1 -- us2k18Minor allele frequency- A:0.09NS EA NA WA 756
    rs118104261,2
    C,F,H--232938795(+) CTACAT/CATTGC 1 -- us2k111Minor allele frequency- C:0.02NS EA NA 1080
    rs284021491,2
    C--232938817(+) CTTTAC/TAGAAG 1 -- us2k10--------
    rs1922662951,2
    --232938844(+) CTATTC/TATATG 1 -- us2k10--------
    rs1410043231,2
    --232938952(+) TCTGGC/TGCACA 1 -- us2k10--------
    rs1502244251,2
    --232938953(+) CTGGCA/GCACAT 1 -- us2k10--------
    rs1823237171,2
    --232938955(+) GGCGCA/TCATGG 1 -- us2k10--------
    rs359352301,2
    C--232939103(+) TGTAA-/TTTTTT 1 -- us2k10--------
    rs1865895481,2
    --232939153(+) GGAGTA/GCAGTG 1 -- us2k10--------

    HapMap Linkage Disequilibrium report for MAP10 (232940638 - 232946092 bp)

    Structural Variations
          Database of Genomic Variants (DGV) variations for MAP10: --
    Site Specific Mutation Identification with PCR Assays
    SeqTarget long-range PCR primers for resequencing MAP10
    DNA2.0 Custom Variant and Variant Library Synthesis for MAP10

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
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      --

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
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    PubMed articles for MAP10 gene integrated from 10 sources:
    (articles sorted by number of sources associating them with MAP10)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. MTR120/KIAA1383, a novel microtubule-associated protein, promotes microtubule stability and ensures cytokinesis. (PubMed id 23264731)1, 2, 3 Fong K.W.... Chen J. (J. Cell Sci. 2013)
    2. The DNA sequence and biological annotation of human chromosome 1. (PubMed id 16710414)1, 2 Gregory S.G.... Bentley D.R. (Nature 2006)
    3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S.... Malek J. (Genome Res. 2004)
    4. Prediction of the coding sequences of unidentified human genes. XVI. The complete sequences of 150 new cDNA clones from brain which code for large proteins in vitro. (PubMed id 10718198)1, 2 Nagase T.... Ohara O. (DNA Res. 2000)
    5. Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. (PubMed id 17081983)1 Olsen J.V....Mann M. (Cell 2006)
    6. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)2 Ota T.... Sugano S. (Nat. Genet. 2004)
    7. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)1 Strausberg R.L....Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002)

    (in PubMed, OMIM, and NCBI Bookshelf)
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     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
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    Entrez Gene: 54627 HGNC: 29265 AceView: KIAA1383 Ensembl:ENSG00000212916 euGenes: HUgn54627
    ECgene: MAP10 H-InvDB: MAP10

    (According to HUGE)
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    HUGE: KIAA1383

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL, and/or others, e.g. Wikipedia and GeneReviews, via UniProtKB/Swiss-Prot)
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    NameDescription
    PharmGKB entry for MAP10 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
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    Patent Information for MAP10 gene:
    Search GeneIP for patents involving MAP10

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Cloud-Clone Corp., Thermo Fisher Scientific, LSBio, Gene Editing from DNA2.0. Clones from OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript, and ESI BIO, PCR Arrays from QIAGEN, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, Enzo Life Sciences, and/or ApexBio, In Situ Hybridization Assays from
    Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory, genOway)
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    GeneCards Homepage - Last full update: 7 May 2014 - Incrementals: 9 May 2014 , 2 Jun 2014 , 26 Jun 2014 , 30 Jun 2014

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