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Aliases for MANEA-AS1 Gene

Subcategory (RNA class) for MANEA-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for MANEA-AS1 Gene

  • MANEA Antisense RNA 1 (Head To Head) 2 3 5
  • MANEA Antisense RNA 1 (Non-Protein Coding) 2
  • MANEA Antisense RNA 1 2

External Ids for MANEA-AS1 Gene

Previous GeneCards Identifiers for MANEA-AS1 Gene

  • GC06U902249
  • GC06M096025

Summaries for MANEA-AS1 Gene

GeneCards Summary for MANEA-AS1 Gene

MANEA-AS1 (MANEA Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MANEA-AS1 Gene

Genomics for MANEA-AS1 Gene

Regulatory Elements for MANEA-AS1 Gene

Enhancers for MANEA-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06G095575 1.3 ENCODE dbSUPER 12.5 -0.2 -191 3.5 HDGF PKNOX1 ATF1 CREB3L1 SIN3A FEZF1 DMAP1 ZNF2 ZNF48 YY1 MANEA MANEA-AS1 ENSG00000219549
GH06G095572 0.6 Ensembl 0.7 +5.0 4951 0.2 ATF1 ETV1 CEBPB CEBPG GABPA ATF3 GATA2 PBX2 FOXP2 FOS MANEA-AS1 GC06P095555
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MANEA-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for MANEA-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000200123 351 3001 HDGF PKNOX1 ATF1 CREB3L1 SIN3A FEZF1 DMAP1 ZNF2 ZNF48 YY1

Genomic Location for MANEA-AS1 Gene

Chromosome:
6
Start:
95,560,096 bp from pter
End:
95,577,451 bp from pter
Size:
17,356 bases
Orientation:
Minus strand

Genomic View for MANEA-AS1 Gene

Genes around MANEA-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MANEA-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MANEA-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MANEA-AS1 Gene

Proteins for MANEA-AS1 Gene

Post-translational modifications for MANEA-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MANEA-AS1 Gene

Domains & Families for MANEA-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MANEA-AS1 Gene

Function for MANEA-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MANEA-AS1 Gene

Localization for MANEA-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MANEA-AS1 Gene

Pathways & Interactions for MANEA-AS1 Gene

SuperPathways for MANEA-AS1 Gene

No Data Available

Interacting Proteins for MANEA-AS1 Gene

Gene Ontology (GO) - Biological Process for MANEA-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MANEA-AS1 Gene

Drugs & Compounds for MANEA-AS1 Gene

No Compound Related Data Available

Transcripts for MANEA-AS1 Gene

mRNA/cDNA for MANEA-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MANEA-AS1 Gene

No ASD Table

Relevant External Links for MANEA-AS1 Gene

GeneLoc Exon Structure for
MANEA-AS1
ECgene alternative splicing isoforms for
MANEA-AS1

Expression for MANEA-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MANEA-AS1 Gene

genes like me logo Genes that share expression patterns with MANEA-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MANEA-AS1 Gene

Orthologs for MANEA-AS1 Gene

Evolution for MANEA-AS1 Gene

ENSEMBL:
Gene Tree for MANEA-AS1 (if available)
TreeFam:
Gene Tree for MANEA-AS1 (if available)

No data available for Orthologs for MANEA-AS1 Gene

Paralogs for MANEA-AS1 Gene

No data available for Paralogs for MANEA-AS1 Gene

Variants for MANEA-AS1 Gene

Sequence variations from dbSNP and Humsavar for MANEA-AS1 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type
rs1000005056 -- 95,575,540(+) ATAAA(C/G)CAAGC intron-variant, nc-transcript-variant, upstream-variant-2KB
rs1000112254 -- 95,574,963(+) CCAGT(A/T)TATAA intron-variant, downstream-variant-500B
rs1000158425 -- 95,572,177(+) ACCTA(A/G)TACCT intron-variant
rs1000167913 -- 95,561,866(+) TCCCA(C/T)AAAAT intron-variant
rs1000530862 -- 95,579,223(+) CAAAA(A/C)TTAGC intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MANEA-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv6110n100 CNV loss 25217958
nsv1031951 CNV loss 25217958
nsv463980 CNV loss 19166990
nsv518549 CNV loss 19592680
nsv604165 CNV loss 21841781
nsv604236 CNV loss 21841781
nsv604238 CNV loss 21841781

Relevant External Links for MANEA-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MANEA-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MANEA-AS1 Gene

Disorders for MANEA-AS1 Gene

Relevant External Links for MANEA-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MANEA-AS1

No disorders were found for MANEA-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MANEA-AS1 Gene

Publications for MANEA-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for MANEA-AS1 Gene

Sources for MANEA-AS1 Gene

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