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Aliases for MAN2B2 Gene

Aliases for MAN2B2 Gene

  • Mannosidase, Alpha, Class 2B, Member 2 2 3
  • EC 3.2.1.24 4 63
  • Core-Specific Lysosomal Alpha-1,6-Mannosidase 2
  • Mannosidase Alpha Class 2B Member 2 4
  • KIAA0935 4

External Ids for MAN2B2 Gene

Previous GeneCards Identifiers for MAN2B2 Gene

  • GC04P006642
  • GC04P006694
  • GC04P006627

Summaries for MAN2B2 Gene

GeneCards Summary for MAN2B2 Gene

MAN2B2 (Mannosidase, Alpha, Class 2B, Member 2) is a Protein Coding gene. Diseases associated with MAN2B2 include mannosidosis. Among its related pathways are Other glycan degradation. GO annotations related to this gene include carbohydrate binding and alpha-mannosidase activity. An important paralog of this gene is MAN2B1.

Tocris Summary for MAN2B2 Gene

  • Mannosidases are divided into two subtypes; I and II, (EC numbers 3.2.1.113 and 3.2.1.114 respectively) which display a wide expression pattern. Mannosidase I hydrolyzes (1,2)-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man9(GlcNAc)2 and mannosidase II hydrolyzes (1,3)- and (1,6)-linked alpha-D-mannose residues in Man5(GlcNAc)3. Both subtypes require a divalent cation cofactor. Mutations in mannosidases can cause mannosidosis (mannosidase I deficiency).

Gene Wiki entry for MAN2B2 Gene

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MAN2B2 Gene

Genomics for MAN2B2 Gene

Regulatory Elements for MAN2B2 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for MAN2B2 Gene

Start:
6,575,175 bp from pter
End:
6,623,362 bp from pter
Size:
48,188 bases
Orientation:
Plus strand

Genomic View for MAN2B2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MAN2B2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MAN2B2 Gene

Proteins for MAN2B2 Gene

  • Protein details for MAN2B2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9Y2E5-MA2B2_HUMAN
    Recommended name:
    Epididymis-specific alpha-mannosidase
    Protein Accession:
    Q9Y2E5
    Secondary Accessions:
    • Q66MP2
    • Q86T67

    Protein attributes for MAN2B2 Gene

    Size:
    1009 amino acids
    Molecular mass:
    113979 Da
    Cofactor:
    Name=Zn(2+); Xref=ChEBI:CHEBI:29105; Note=Binds 1 zinc ion per subunit.;
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for MAN2B2 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for MAN2B2 Gene

Proteomics data for MAN2B2 Gene at MOPED

Post-translational modifications for MAN2B2 Gene

  • Glycosylation at Asn226, Asn249, Asn294, Asn336, Asn516, Asn608, Asn670, Asn675, Asn748, Asn808, Asn812, and Asn890
  • Modification sites at PhosphoSitePlus

Other Protein References for MAN2B2 Gene

Domains for MAN2B2 Gene

Suggested Antigen Peptide Sequences for MAN2B2 Gene

Graphical View of Domain Structure for InterPro Entry

Q9Y2E5

UniProtKB/Swiss-Prot:

MA2B2_HUMAN :
  • Q9Y2E5
Family:
  • Belongs to the glycosyl hydrolase 38 family.
genes like me logo Genes that share domains with MAN2B2: view

No data available for Gene Families for MAN2B2 Gene

Function for MAN2B2 Gene

Molecular function for MAN2B2 Gene

UniProtKB/Swiss-Prot CatalyticActivity: Hydrolysis of terminal, non-reducing alpha-D-mannose residues in alpha-D-mannosides

Enzyme Numbers (IUBMB) for MAN2B2 Gene

Gene Ontology (GO) - Molecular Function for MAN2B2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003824 catalytic activity --
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds --
GO:0004559 alpha-mannosidase activity IEA --
GO:0008270 zinc ion binding IEA --
GO:0015923 mannosidase activity --
genes like me logo Genes that share ontologies with MAN2B2: view

Animal Model Products

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for MAN2B2

In Situ Assay Products

Flow Cytometry Products

No data available for Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MAN2B2 Gene

Localization for MAN2B2 Gene

Subcellular locations from UniProtKB/Swiss-Prot for MAN2B2 Gene

Secreted.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for MAN2B2 Gene COMPARTMENTS Subcellular localization image for MAN2B2 gene
Compartment Confidence
extracellular 3
lysosome 2
vacuole 2
mitochondrion 1
nucleus 1
peroxisome 1

Gene Ontology (GO) - Cellular Components for MAN2B2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0070062 extracellular exosome IDA 23376485
genes like me logo Genes that share ontologies with MAN2B2: view

Pathways for MAN2B2 Gene

SuperPathways for MAN2B2 Gene

Superpath Contained pathways
1 Other glycan degradation
genes like me logo Genes that share pathways with MAN2B2: view

Pathways by source for MAN2B2 Gene

1 KEGG pathway for MAN2B2 Gene

Interacting Proteins for MAN2B2 Gene

Gene Ontology (GO) - Biological Process for MAN2B2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005975 carbohydrate metabolic process --
GO:0006013 mannose metabolic process IEA --
genes like me logo Genes that share ontologies with MAN2B2: view

Compounds for MAN2B2 Gene

(5) Tocris Compounds for MAN2B2 Gene

Compound Action Cas Number
1-Deoxynojirimycin Glucosidase I and II inhibitor [19130-96-2]
Castanospermine Glucosidases alpha and beta inhibitor [79831-76-8]
Kifunensine Inhibitor of class I alpha-mannosidases [109944-15-2]
Miglustat hydrochloride alpha-glucosidase I and II inhibitor. Also inhibits ceramide-specific glycosyltransferases [210110-90-0]
Voglibose Orally active alpha-glucosidase inhibitor [83480-29-9]
genes like me logo Genes that share compounds with MAN2B2: view

Transcripts for MAN2B2 Gene

Unigene Clusters for MAN2B2 Gene

Mannosidase, alpha, class 2B, member 2:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for MAN2B2

Primer Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MAN2B2 Gene

ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11a · 11b ^ 12 ^ 13 ^ 14a · 14b ^ 15 ^ 16a · 16b ^ 17 ^ 18a · 18b ^ 19 ^ 20
SP1: - -
SP2:
SP3:

Relevant External Links for MAN2B2 Gene

GeneLoc Exon Structure for
MAN2B2
ECgene alternative splicing isoforms for
MAN2B2

Expression for MAN2B2 Gene

mRNA expression in normal human tissues for MAN2B2 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for MAN2B2 Gene

SOURCE GeneReport for Unigene cluster for MAN2B2 Gene Hs.188464

genes like me logo Genes that share expressions with MAN2B2: view

In Situ Assay Products

No data available for mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for MAN2B2 Gene

Orthologs for MAN2B2 Gene

This gene was present in the common ancestor of animals.

Orthologs for MAN2B2 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia MAN2B2 35
  • 92.5 (n)
  • 90.46 (a)
cow
(Bos Taurus)
Mammalia -- 36
  • 58 (a)
OneToMany
-- 36
  • 66 (a)
OneToMany
-- 36
  • 66 (a)
OneToMany
-- 36
  • 49 (a)
OneToMany
LOC532207 35
  • 75.47 (n)
  • 67.83 (a)
dog
(Canis familiaris)
Mammalia -- 36
  • 68 (a)
OneToMany
-- 36
  • 68 (a)
OneToMany
MAN2B2 35
  • 79.05 (n)
  • 71.87 (a)
mouse
(Mus musculus)
Mammalia Man2b2 35
  • 79.03 (n)
  • 76.14 (a)
Man2b2 16
Man2b2 36
  • 75 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia MAN2B2 36
  • 67 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia MAN2B2 36
  • 55 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Man2b2 35
  • 79.76 (n)
  • 75.47 (a)
chicken
(Gallus gallus)
Aves MAN2B2 35
  • 65.82 (n)
  • 67.45 (a)
MAN2B2 36
  • 64 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia man2b2 35
  • 62.11 (n)
  • 62.65 (a)
zebrafish
(Danio rerio)
Actinopterygii Dr.2357 35
man2b2 35
  • 61.24 (n)
  • 60.04 (a)
MAN2B2 36
  • 58 (a)
OneToOne
fruit fly
(Drosophila melanogaster)
Insecta alpha-Man-IIb 36
  • 18 (a)
ManyToMany
Species with no ortholog for MAN2B2:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for MAN2B2 Gene

ENSEMBL:
Gene Tree for MAN2B2 (if available)
TreeFam:
Gene Tree for MAN2B2 (if available)

Paralogs for MAN2B2 Gene

Paralogs for MAN2B2 Gene

Selected SIMAP similar genes for MAN2B2 Gene using alignment to 5 proteins:

genes like me logo Genes that share paralogs with MAN2B2: view

Variants for MAN2B2 Gene

Sequence variations from dbSNP and Humsavar for MAN2B2 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type MAF
rs14838 -- 6,622,292(-) GCTGT(C/T)ATGCC utr-variant-3-prime
rs734036 -- 6,596,139(+) GTGGG(C/T)GTGGT intron-variant
rs1807114 -- 6,616,963(+) atgaa(A/G)aaaaa intron-variant
rs1807115 -- 6,617,047(+) AGTCA(C/T)GTCTT intron-variant
rs2301788 - 6,605,137(-) TGATG(C/T)TGTAG reference, missense, nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for MAN2B2 Gene

Variant ID Type Subtype PubMed ID
esv34196 OTHER Inversion 12058347
nsv829849 CNV Loss 17160897
nsv878526 CNV Loss 21882294
nsv461189 CNV Loss 19166990
nsv470006 CNV Loss 18288195
nsv878527 CNV Gain 21882294
esv2727004 CNV Deletion 23290073
nsv526206 CNV Gain 19592680
dgv1567e1 CNV Complex 17122850
nsv4215 CNV Loss 18451855
nsv10440 CNV Loss 18304495
esv2657120 CNV Deletion 23128226
essv23633 CNV CNV 17122850
nsv10441 CNV Loss 18304495

Relevant External Links for MAN2B2 Gene

HapMap Linkage Disequilibrium report
MAN2B2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for MAN2B2 Gene

Disorders for MAN2B2 Gene

MalaCards: The human disease database

MalaCards: The human disease database. (1) Diseases for MAN2B2 Gene including...

Search for MAN2B2 Gene in MalaCards »

Relevant External Links for MAN2B2

Genetic Association Database (GAD)
MAN2B2
Human Genome Epidemiology (HuGE) Navigator
MAN2B2
genes like me logo Genes that share disorders with MAN2B2: view

No data available for UniProtKB/Swiss-Prot for MAN2B2 Gene

Publications for MAN2B2 Gene

  1. Prediction of the coding sequences of unidentified human genes. XIII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. (PMID: 10231032) Nagase T. … Ohara O. (DNA Res. 1999) 2 3 4
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  3. Generation and annotation of the DNA sequences of human chromosomes 2 and 4. (PMID: 15815621) Hillier L.W. … Wilson R.K. (Nature 2005) 3 4
  4. Characterization of a human core-specific lysosomal {alpha}1,6-mannosidase involved in N-glycan catabolism. (PMID: 16115860) Park C. … Moremen K.W. (J. Biol. Chem. 2005) 2 3
  5. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose J.E. … Uhl G.R. (Mol. Med. 2010) 3 48

Products for MAN2B2 Gene

  • antibodies-online proteins for MAN2B2
  • antibodies-online antibodies for MAN2B2
  • antibodies-online kits for MAN2B2

Sources for MAN2B2 Gene

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