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Aliases for MAN1B1-AS1 Gene

Subcategory (RNA class) for MAN1B1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for MAN1B1-AS1 Gene

  • MAN1B1 Antisense RNA 1 (Head To Head) 2 3 5

External Ids for MAN1B1-AS1 Gene

Previous GeneCards Identifiers for MAN1B1-AS1 Gene

  • GC09M139981

Summaries for MAN1B1-AS1 Gene

GeneCards Summary for MAN1B1-AS1 Gene

MAN1B1-AS1 (MAN1B1 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MAN1B1-AS1 Gene

Genomics for MAN1B1-AS1 Gene

Regulatory Elements for MAN1B1-AS1 Gene

Enhancers for MAN1B1-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09G137025 1.3 ENCODE dbSUPER 5.3 +56.2 56228 10.8 HDGF PKNOX1 AGO1 ARID4B SIN3A ZNF2 ZBTB7B ZNF766 ZNF143 DEK FUT7 MAN1B1-AS1 ABCA2
GH09G137085 1.1 ENCODE 0.7 +0.2 200 2.9 HDGF HNRNPUL1 PKNOX1 FOXA2 CREB3L1 AGO1 ARID4B SIN3A DMAP1 ZNF2 DPP7 FUT7 MAN1B1-AS1 PIR60888
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MAN1B1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for MAN1B1-AS1 Gene

Chromosome:
9
Start:
137,084,946 bp from pter
End:
137,086,817 bp from pter
Size:
1,872 bases
Orientation:
Minus strand

Genomic View for MAN1B1-AS1 Gene

Genes around MAN1B1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MAN1B1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MAN1B1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MAN1B1-AS1 Gene

Proteins for MAN1B1-AS1 Gene

Post-translational modifications for MAN1B1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MAN1B1-AS1 Gene

Domains & Families for MAN1B1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MAN1B1-AS1 Gene

Function for MAN1B1-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MAN1B1-AS1 Gene

Localization for MAN1B1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MAN1B1-AS1 Gene

Pathways & Interactions for MAN1B1-AS1 Gene

SuperPathways for MAN1B1-AS1 Gene

No Data Available

Interacting Proteins for MAN1B1-AS1 Gene

Gene Ontology (GO) - Biological Process for MAN1B1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MAN1B1-AS1 Gene

Drugs & Compounds for MAN1B1-AS1 Gene

No Compound Related Data Available

Transcripts for MAN1B1-AS1 Gene

mRNA/cDNA for MAN1B1-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MAN1B1-AS1 Gene

No ASD Table

Relevant External Links for MAN1B1-AS1 Gene

GeneLoc Exon Structure for
MAN1B1-AS1
ECgene alternative splicing isoforms for
MAN1B1-AS1

Expression for MAN1B1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MAN1B1-AS1 Gene

genes like me logo Genes that share expression patterns with MAN1B1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MAN1B1-AS1 Gene

Orthologs for MAN1B1-AS1 Gene

Evolution for MAN1B1-AS1 Gene

ENSEMBL:
Gene Tree for MAN1B1-AS1 (if available)
TreeFam:
Gene Tree for MAN1B1-AS1 (if available)

No data available for Orthologs for MAN1B1-AS1 Gene

Paralogs for MAN1B1-AS1 Gene

No data available for Paralogs for MAN1B1-AS1 Gene

Variants for MAN1B1-AS1 Gene

Sequence variations from dbSNP and Humsavar for MAN1B1-AS1 Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type
rs968733 Likely benign 137,087,175(+) CGAGA(A/G)CTATG nc-transcript-variant, upstream-variant-2KB, reference, missense, utr-variant-5-prime
rs202182837 Uncertain significance 137,087,182(+) TATGA(C/T)AACAG nc-transcript-variant, upstream-variant-2KB, reference, synonymous-codon, utr-variant-5-prime
rs367593587 Uncertain significance 137,086,979(+) ATGGG(A/C)GGGCT nc-transcript-variant, upstream-variant-2KB, utr-variant-5-prime
rs575361734 Uncertain significance 137,087,212(+) TCGTG(C/G)TGGAG nc-transcript-variant, upstream-variant-2KB, reference, missense, utr-variant-5-prime
rs776658507 Uncertain significance 137,087,040(+) CGGTT(C/T)CTCTC nc-transcript-variant, upstream-variant-2KB, reference, missense

Structural Variations from Database of Genomic Variants (DGV) for MAN1B1-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv13007n54 CNV loss 21841781
esv2422220 CNV deletion 17116639
esv2761561 CNV gain 21179565
nsv469918 CNV loss 18288195
nsv524322 CNV loss 19592680
nsv616005 CNV loss 21841781
nsv616007 CNV loss 21841781
nsv825183 CNV gain 20364138
nsv831761 CNV loss 17160897
nsv951206 CNV deletion 24416366

Relevant External Links for MAN1B1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MAN1B1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MAN1B1-AS1 Gene

Disorders for MAN1B1-AS1 Gene

Relevant External Links for MAN1B1-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MAN1B1-AS1

No disorders were found for MAN1B1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MAN1B1-AS1 Gene

Publications for MAN1B1-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64
  3. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3 64

Products for MAN1B1-AS1 Gene

Sources for MAN1B1-AS1 Gene

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