Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

MAN1A2 Gene

protein-coding   GIFtS: 63
GCID: GC01P117910

mannosidase, alpha, class 1A, member 2

 Explore 4 diseases affiliated with
MAN1A2 via our new
 Human Malady Compendium 
Biological research products
for MAN1A2
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Mannosidase, Alpha, Class 1A, Member 21 2     EC 3.2.1.1133 8
MAN1B1 2 3     Alpha1,2-Mannosidase1
Alpha-1,2-Mannosidase IB2 3     Mannosyl-Oligosaccharide 1,2-Alpha-Mannosidase IB2
Processing Alpha-1,2-Mannosidase IB2 3     Mannosidase Alpha Class 1A Member 23

External Ids:    HGNC: 68221   Entrez Gene: 109052   Ensembl: ENSG000001981627   OMIM: 6043455   UniProtKB: O604763   

Export aliases for MAN1A2 gene to outside databases

Previous GC identifers: GC01P118369 GC01P116748 GC01P117057 GC01P117256 GC01P117623 GC01P117711 GC01P115766


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for MAN1A2:
Alpha-mannosidases function at different stages of N-glycan maturation in mammalian cells. See MAN2A1 (MIM 154582) for
general information.(supplied by OMIM, Mar 2008)

UniProtKB/Swiss-Prot: MA1A2_HUMAN, O60476
Function: Involved in the maturation of Asn-linked oligosaccharides. Progressively trim alpha-1,2-linked mannose
residues from Man(9)GlcNAc(2) to produce Man(5)GlcNAc(2)

summary for MAN1A2:
Mannosidases are divided into two subtypes; I and II, (EC numbers 3.2.1.113 and 3.2.1.114 respectively)
which display a wide expression pattern. Mannosidase I hydrolyzes (1,2)-linked alpha-D-mannose residues in
the oligo-mannose oligosaccharide Man9(GlcNAc)2 and mannosidase II hydrolyzes (1,3)- and (1,6)-linked
alpha-D-mannose residues in Man5(GlcNAc)3. Both subtypes require a divalent cation cofactor. Mutations in
mannosidases can cause mannosidosis (mannosidase I deficiency).

Gene Wiki entry for MAN1A2


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000001.10  NC_018912.1  NT_032977.9  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the MAN1A2 gene promoter:
         E2F-3a   E2F-4   E2F-5   MEF-2   E2F-2   Evi-1   FAC1   E2F   E2F-1   aMEF-2   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidMAN1A2 promoter sequence
   Search SABiosciences Chromatin IP Primers for MAN1A2

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat MAN1A2


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 1p13   Ensembl cytogenetic band:  1p12   HGNC cytogenetic band: 1p13

MAN1A2 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
MAN1A2 gene location

GeneLoc information about chromosome 1         GeneLoc Exon Structure

GeneLoc location for GC01P117910:  view genomic region     (about GC identifiers)

Start:
117,910,071 bp from pter      End:
118,071,494 bp from pter
Size:
161,424 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: MA1A2_HUMAN, O60476 (See protein sequence)
Recommended Name: Mannosyl-oligosaccharide 1,2-alpha-mannosidase IB  
Size: 641 amino acids; 73004 Da
Cofactor: Calcium
Subcellular location: Golgi apparatus membrane; Single-pass type II membrane protein
Secondary accessions: Q9H510

Explore the universe of human proteins at neXtProt for MAN1A2: NX_O60476

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_O60476

  • 4/12 DME Specific Peptides for MAN1A2 (O60476) (see all 12)
     QSFFLAE  DSFYEYL  FNTEAHP  FFLPDSSK 

    MAN1A2 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_006690.1  
    ENSEMBL proteins: 
     ENSP00000348959   ENSP00000412706   ENSP00000396362   ENSP00000402416  
    Reactome Protein details: O60476
    Human Recombinant Protein Products: 
    Browse Purified and Recombinant Proteins at EMD Millipore
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Browse OriGene full length recombinant human proteins expressed in human HEK293 cells
    Browse OriGene Protein Over-expression Lysates
    OriGene Custom Protein Services for MAN1A2 
    GenScript Custom Purified and Recombinant Proteins Services for MAN1A2
    Novus Biologicals MAN1A2 Protein
    Novus Biologicals MAN1A2 Lysate
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for MAN1A2

    Gene Ontology (GO): 5/6 cellular component terms (GO ID links to tree view) (see all 6):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000139Golgi membrane TAS--
    GO:0005624membrane fraction ----
    GO:0005730nucleolus IDA--
    GO:0005794Golgi apparatus IDA--
    GO:0016020membrane TAS9592125


    MAN1A2 for ontologies           About GeneDecksing



    MAN1A2 Antibody Products: 
    Browse EMD Millipore's Extensive Line of Mono- and Polyclonal Antibodies
    Browse R&D Systems for Antibodies
    Browse OriGene Antibodies
    OriGene Custom Antibody Services for MAN1A2 
    GenScript Custom Superior Antibodies Services for MAN1A2
    Novus Biologicals MAN1A2 Antibodies
    Search for Antibodies for MAN1A2 at Abcam  
    Uscn Antibodies for MAN1A2
    Search ThermoFisher Antibodies for MAN1A2

    Assay Products for MAN1A2: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for MAN1A2
    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for MAN1A2


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    MAN1A2 for domains           About GeneDecksing

    1 InterPro domain/family:
     IPR001382 Glyco_hydro_47

    Graphical View of Domain Structure for InterPro Entry O60476

    ProtoNet protein and cluster: O60476

    1 Blocks protein family: IPB001382 Glycosyl hydrolase family 47 signature

    UniProtKB/Swiss-Prot: MA1A2_HUMAN, O60476
    Similarity: Belongs to the glycosyl hydrolase 47 family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: MA1A2_HUMAN, O60476
    Function: Involved in the maturation of Asn-linked oligosaccharides. Progressively trim alpha-1,2-linked mannose
    residues from Man(9)GlcNAc(2) to produce Man(5)GlcNAc(2)
    Catalytic activity: Hydrolysis of the terminal (1->2)-linked alpha-D-mannose residues in the oligo-mannose
    oligosaccharide Man(9)(GlcNAc)(2)
    Enzyme regulation: Inhibited by both 1-deoxymannojirimycin and kifunensine

         Genatlas biochemistry entry for MAN1A2:
    alpha-mannosidase,class 1A,member 2,membrane type,expressed in brain placenta and lymphocytes,involved in processing of
    Asp-linked (N) glycans

    Enzyme Number (IUBMB): EC 3.2.1.1131 2

    miRNA
    Products:
        
    OriGene 3'-UTR Clone: MAN1A2
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat MAN1A2
    8/42 QIAGEN miScript miRNA Assays for microRNAs that regulate MAN1A2 (see all 42):
    hsa-miR-2052 hsa-miR-4307 hsa-miR-607 hsa-miR-19b-2* hsa-miR-30d hsa-miR-9 hsa-miR-30a hsa-miR-133a
    SwitchGear 3'UTR luciferase reporter plasmidMAN1A2 3' UTR sequence
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for MAN1A2 (see all 7)
    OriGene shRNA RFP: MAN1A2
    OriGene siRNA: MAN1A2
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat MAN1A2

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for MAN1A2

    Clone
    Products:
         
    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for MAN1A2 (see all 3)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for MAN1A2
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: MAN1A2 (NM_006699)
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for MAN1A2
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat MAN1A2 

    Cell Line
    Products:
         
    GenScript Custom overexpressing Cell Line Services for MAN1A2
    Search LifeMap BioReagents cell lines for MAN1A2

    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MAN1A2

    Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004571mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEA--
    GO:0005509calcium ion binding IEA--


    MAN1A2 for ontologies           About GeneDecksing


    Animal Models:
         Mouse knock-out Man1a2tm1.1Ahe for MAN1A2
         5 MGI mutant phenotypes (inferred from 2 alleles(MGI details for Man1a2):
     cardiovascular system  homeostasis/metabolism  mortality/aging  no phenotypic analysis  respiratory system 

    MAN1A2 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Asparagine N-linked glycosylation
    Asparagine N-linked glycosylation1.00
    Post-translational protein modification0.44
    N-Glycan biosynthesis0.52
    Metabolism of proteins0.15
    2N-glycan trimming and elongation in the cis-Golgi
    N-glycan trimming and elongation in the cis-Golgi1.00
    Progressive trimming of alpha-1,2-linked mannose residues from Man9/8/7GlcNAc2 to produce Man5GlcNAc20.60
    3Protein processing in endoplasmic reticulum
    Protein processing in endoplasmic reticulum1.00
    4N-glycan antennae elongation in the medial/trans-Golgi
    Transport to the Golgi and subsequent modification0.56
    5Metabolism
    Metabolic pathways0.38

    Pathway sources
    See GeneCards unified pathways
    Show all pathways


    5/6        Reactome Pathways for MAN1A2 (see all 6)
        Transport to the Golgi and subsequent modification
    Asparagine N-linked glycosylation
    Progressive trimming of alpha-1,2-linked mannose residues from Man9/8/7GlcNAc2 to produce Man5GlcNAc2
    Metabolism of proteins
    Post-translational protein modification


    3         Kegg Pathways  (Kegg details for MAN1A2):
        N-Glycan biosynthesis
    Metabolic pathways
    Protein processing in endoplasmic reticulum

    UniProtKB/Swiss-Prot: MA1A2_HUMAN, O60476
    Pathway: Protein modification; protein glycosylation


    MAN1A2 for pathways           About GeneDecksing

    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for MAN1A2

    STRING Interaction Network Preview (showing 4 interactants - click image to see more details)

    5/10 Interacting proteins for MAN1A2 (O604762, 3 ENSP000003489594) via UniProtKB, MINT, STRING, and/or I2D (see all 10)

    InteractantInteraction Details
    GeneCardExternal ID(s)
    SMAD9O151982, 3MINT-62130 I2D: score=3 
    UBCP0CG483, ENSP000003448184I2D: score=1 STRING: ENSP00000344818
    CYTH1Q154383I2D: score=3 
    FOSP011003I2D: score=1 
    GTF2F2P139843I2D: score=1 
    About this table

    Gene Ontology (GO): 5/7 biological process terms (GO ID links to tree view) (see all 7):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006491N-glycan processing TAS9592125
    GO:0007585respiratory gaseous exchange IEA--
    GO:0009100glycoprotein metabolic process ----
    GO:0018279protein N-linked glycosylation via asparagine TAS--
    GO:0043687post-translational protein modification TAS--


    MAN1A2 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    MAN1A2 for compounds           About GeneDecksing

    EMD Millipore small molecules for MAN1A2:
    Small Molecule - inhibitor
    Browse drugs & compounds from Enzo Life Sciences

    Compounds for MAN1A2 available from Tocris Bioscience    About this table
    CompoundAction CAS #
    KifunensineInhibitor of class I alpha-mannosidases[109944-15-2]
    SwainsonineInhibitor of alpha-mannosidase II[72741-87-8]
    1-Deoxymannojirimycin hydrochloridealpha-Mannosidase I inhibitor[84444-90-6]

    3 HMDB Compounds for MAN1A2    About this table
    CompoundSynonyms CAS #PubMed Ids
    CalciumCa (see all 2)7440-70-2--
    D-MannoseDL-mannose (see all 13)3458-28-4--
    WaterDihydrogen oxide (see all 2)7732-18-5--
    5 Novoseek chemical compound relationships for MAN1A2 gene    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    man5glcnac2 90.6 2 11714724 (1), 10672024 (1)
    1-deoxynojirimycin 88.7 3 16615997 (2), 10764822 (1)
    man9(glcnac)2 85 2 11714724 (1)
    mannose 71.4 1 16615997 (1)
    calcium 8.67 3 10764822 (1), 9271078 (1)

    Search CenterWatch for drugs/clinical trials and news about MAN1A2 / MA1A2 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for MAN1A2 gene: 
    NM_006699.3  

    Unigene Cluster for MAN1A2:

    Mannosidase, alpha, class 1A, member 2
    Hs.435938  [show with all ESTs]
    Unigene Representative Sequence: BC052954
    5 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000356554(uc009whg.1 uc001ehd.1) ENST00000482811 ENST00000449370
    ENST00000421535 ENST00000422329

    miRNA
    Products:
         
    OriGene 3'-UTR Clone: MAN1A2
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat MAN1A2
    8/42 QIAGEN miScript miRNA Assays for microRNAs that regulate MAN1A2 (see all 42):
    hsa-miR-2052 hsa-miR-4307 hsa-miR-607 hsa-miR-19b-2* hsa-miR-30d hsa-miR-9 hsa-miR-30a hsa-miR-133a
    SwitchGear 3'UTR luciferase reporter plasmidMAN1A2 3' UTR sequence
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for MAN1A2 (see all 7)
    OriGene shRNA RFP: MAN1A2
    OriGene siRNA: MAN1A2
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat MAN1A2
    Clone
    Products:
         
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for MAN1A2 (see all 3)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for MAN1A2
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: MAN1A2 (NM_006699)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for MAN1A2
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat MAN1A2 
    Primer
    Products:
        
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for MAN1A2
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat MAN1A2
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat MAN1A2
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat MAN1A2

    Additional cDNA sequence: 

    AF027156.1 AK001970.1 AK090840.1 AK307842.1 BC015874.1 BC052954.1 BC063300.1 HQ234305.1 

    7 DOTS entries:

    DT.95269950  DT.86853467  DT.121406992  DT.75155982  DT.95294363  DT.40109874  DT.95175951 

    24/264 AceView cDNA sequences (see all 264):

    AA832229 AI245806 W37459 AA911882 AW951923 BM765284 BE219253 AU133800 
    NM_006699 AA394233 AI128620 H84925 AA235544 BQ721798 AI417585 BC063300 
    AI889444 AW779493 AL133955 AA478626 CR619125 AA478864 AI285106 AL119741 

    GeneLoc Exon Structure

    4 Alternative Splicing Database (ASD) splice patterns (SP) for MAN1A2    About this scheme

    ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5a · 5b ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12a · 12b ^ 13 ^ 14 ^ 15a · 15b
    SP1:                                                                                            -                     
    SP2:                                                                                                                  
    SP3:                                                                                            -                     
    SP4:              -     -                                                                                             


    ECgene alternative splicing isoforms for MAN1A2

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    MAN1A2 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: TGCCAAGCAT

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See MAN1A2 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for MAN1A2

    SOURCE GeneReport for Unigene cluster: Hs.435938

    UniProtKB/Swiss-Prot: MA1A2_HUMAN, O60476
    Tissue specificity: Highest levels of expression in placenta and testis

        SABiosciences Expression via Pathway-Focused PCR Array including MAN1A2: 
              Glycosylation in human mouse rat

    Primer
    Products:
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for MAN1A2
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat MAN1A2
    QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat MAN1A2
    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat MAN1A2
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MAN1A2

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of eukaryotes.

    Orthologs for MAN1A2 gene from 7/25 species (see all 25)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves MAN1A21 mannosidase, alpha, class 1A, member 2 80.86(n)
    89.24(a)
      418265  XM_416490.3  XP_416490.2 
    lizard
    (Anolis carolinensis)
    Reptilia MAN1A26
    --
    84(a)
    1 ↔ 1
    GL343218.1(331057-367064)
    zebrafish
    (Danio rerio)
    Actinopterygii Dr.187662 Transcribed sequence with moderate similarity to protein more 77.26(n)    BQ479592.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta alpha-Man-I1 , 3 N-linked glycosylation
    mannosyl-oligosaccharide
    more3
    alpha Mannosidase I1
    58(a)3
    53.62(n)1
    51.97(a)1
      319571  NM_206676.21  NP_996399.11 
    worm
    (Caenorhabditis elegans)
    Secernentea C52E4.53
    D2030.11
    alpha 1,2, mannosidase3
    Protein D2030.11
    46(a)
    (best of 2)3
    54.91(n)1
    47.36(a)1
      V(11985739-11988071)3
    1725101  NM_059715.41  NP_492116.11 
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons MANIB6
    MNS26
    mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS...
    mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS...
    36(a)
    35(a)
    many ↔ many
    many ↔ many
    1(19128144-19132318)
    3(7413847-7418410)
    rice
    (Oryza sativa)
    Liliopsida --
    glycosyl hydrolase family 47 domain contain protei...
    37(a)
    1 → many
    4(30436035-30443247)


    ENSEMBL Gene Tree for MAN1A2 (if available)
    TreeFam Gene Tree for MAN1A2 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for MAN1A2 gene
    MAN1C12  MAN1A12  MAN1B12  
    6 SIMAP similar genes for MAN1A2 using alignment to 4 protein entries:     MA1A2_HUMAN (see all proteins):
    pp6318    MAN1C1    MAN1A1    DKFZp434I213    EDEM3    MAN1B1

    MAN1A2 for paralogs           About GeneDecksing


    1 Pseudogenes.org Pseudogene for MAN1A2
    PGOHUM00000259323


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/2377 NCBI SNPs in MAN1A2 are shown (see all 2377    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 1 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1924461321,2
    --117908106(+) CTGAAA/CTTTTC 1 -- us2k10--------
    rs1157433701,2
    F,--117908178(+) CCCCCC/TACTTT 1 -- us2k11Minor allele frequency- T:0.03WA 118
    rs1448368211,2
    --117908205(+) ACATTA/TGAGAC 1 -- us2k10--------
    rs1387656101,2
    --117908312(+) GGGACC/TGGGCA 1 -- us2k10--------
    rs1838308341,2
    --117908352(+) CTGGTA/GAGAGG 1 -- us2k10--------
    rs1888456151,2
    --117908505(+) GAACAC/TGAGAC 1 -- us2k10--------
    rs1140139281,2
    --117908584(+) CCAGTC/TATCAG 1 -- us2k11Minor allele frequency- T:0.01WA 118
    rs13423891,2
    C,F,A,H,--117908772(+) TATTGT/CCGCCT 1 -- us2k113Minor allele frequency- C:0.12NS NA WA 1712
    rs1488748431,2
    --117908942(+) GAAGGA/CGCAGG 1 -- us2k10--------
    rs1435771531,2
    --117908943(+) AAGGAA/GCAGGG 1 -- us2k10--------

    HapMap Linkage Disequilibrium report for MAN1A2 (117910071 - 118071494 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 15 variations for MAN1A2
         11 CNVs: 84495 84496 84490 58327 74660 84491 74661 84494 84497 74662 74658
         4 Indels: 74659 84492 74663 84493
    Human Gene Mutation Database (HGMD): MAN1A2

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing MAN1A2
    DNA2.0 Custom Variant and Variant Library Synthesis for MAN1A2

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    MAN1A2 for disorders           About GeneDecksing

    OMIM gene information: 604345    OMIM disorders: --

    4 diseases for MAN1A2:    About MalaCards
    mannosidosis    fanconi's anemia    anemia    immunodeficiency

    Human Genome Epidemiology (HuGE) Navigator: MAN1A2 (2 documents)

    Export disorders for MAN1A2 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for MAN1A2 gene, integrated from 9 sources (see all 39):
    (articles sorted by number of sources associating them with MAN1A2)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Molecular cloning, chromosomal mapping and tissue-specific expression of a novel human alpha-1,2-mannosidase gene involved in N-glycan maturation. (PubMed id 9592125)1, 2, 3, 9 Tremblay L.O.... Herscovics A. (1998)
    2. The DNA sequence and biological annotation of human chromosome 1. (PubMed id 16710414)1, 2 Gregory S.G.... Bentley D.R. (2006)
    3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    4. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PubMed id 20379614)1 Rose J.E....Uhl G.R. (2010)
    5. TLR8-dependent TNF-(alpha) overexpression in Fanconi anemia group C cells. (PubMed id 19850743)1 Vanderwerf S.M....Bagby G.C. (2009)
    6. Screening for replication of genome-wide SNP associations in sporadic ALS. (PubMed id 18987618)1 Cronin S....Hardiman O. (2008)
    7. Toward a confocal subcellular atlas of the human proteome. (PubMed id 18029348)1 Barbe L....Andersson-Svahn H. (2008)
    8. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PubMed id 16344560)1 Kimura K.... Sugano S. (2006)
    9. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1 Ota T.... Sugano S. (2004)
    10. Functional proteomics mapping of a human signaling pathway. (PubMed id 15231748)1 Colland F....Gauthier J.M. (2004)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 10905 HGNC: 6822 AceView: MAN1A2 Ensembl:ENSG00000198162 euGenes: HUgn10905
    ECgene: MAN1A2 Kegg: 10905 H-InvDB: MAN1A2

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for MAN1A2 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for MAN1A2 gene:
    Search GeneIP for patents involving MAN1A2

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences),
    In Situ Hybridization Assays from
    Advanced Cell Diagnostics
    About This Section

     EMD Millipore small molecules (inhibitor) for MAN1A2
     Browse EMD Millipore's Extensive Line of Mono- and Polyclonal Antibodies
     Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
     Browse Kits and Assays available from EMD Millipore
     Browse Purified and Recombinant Proteins at EMD Millipore
     Browse for Gene Knock-down Tools from EMD Millipore
     
     EMD Millipore Custom Antibody & Bulk Services
     EMD Millipore Preclinical / Clinical Development Services
     EMD Millipore Immunoassay Services
     EMD Millipore Target Screening & Profiling Services

      
     Browse Antibodies   Browse Cell Culture Products  
     Browse ELISAs   Browse Flow Cytometry Kits  
     Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
     Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
     Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
     Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
     Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
     Browse Phosphatase Activity Assays/Reagents   Browse Recombinant/Natural Proteins  
     Browse OriGene Antibodies   OriGene shRNA RFP for MAN1A2  
     OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for MAN1A2   OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for MAN1A2  
     Browse OriGene Protein Over-expression Lysates   Browse OriGene Fluorogenic Cell Assay Kits  
     OriGene siRNA for MAN1A2   OriGene 3'-UTR Clone for MAN1A2  
     OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for MAN1A2   OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for MAN1A2  
     Browse OriGene GFP tagged cDNA clones in CMV expression vector   Browse OriGene MicroRNA Expression Plasmids  
     Browse OriGene basic RS shRNAs   Browse OriGene validated miRNA SYBR primer pairs  
     Browse OriGene full length recombinant human proteins expressed in human HEK293 cells   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
     OriGene Custom Antibody Services for MAN1A2   OriGene Custom Protein Services for MAN1A2  
     OriGene Custom Immunoassay Development  

     
     
     QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat MAN1A2
     QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing MAN1A2
     QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat MAN1A2
     QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat MAN1A2
     QIAGEN QuantiFast Probe-based Assays in human, mouse, rat MAN1A2
     QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat MAN1A2
     GenScript Custom Purified and Recombinant Proteins Services for MAN1A2 GenScript cDNA clones with any tag delivered in your preferred vector for MAN1A2
     GenScript Custom Assay Services for MAN1A2 GenScript Custom Superior Antibodies Services for MAN1A2
     GenScript Custom overexpressing Cell Line Services for MAN1A2 CloneReady with Over 120,000 Genes
     Gene Synthesis: Any Gene in Any Vector Vector-based siRNA and miRNA, Ready for Transfection
     Gene Mutant Library, Variants up to 10^11 Plasmid Preparation
     Custom Peptide Services
     Search for Antibodies & Assays

     Regulatory tfbs in MAN1A2 promoter
     Search Chromatin IP Primers for MAN1A2
     RT2 qPCR Primer Assay in human, mouse, rat MAN1A2
     Search GNC Networks for MAN1A2
     SABiosciences PCR Arrays including human, mouse, rat MAN1A2
     Tocris compounds for MAN1A2
     Browse Sino Biological Proteins and Antibodies
     Browse Sino Biological cDNA Clones
     Antibodies/Proteins Production Services
     Rabbit Monoclonal Antibody Platform
     Bulk Purchasing
     Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
     Novus Tissue Slides
     MAN1A2 antibodies
     MAN1A2 proteins
     MAN1A2 lysates
     Search for Antibodies for MAN1A2 at Abcam
     See all of Abcam's Antibodies, Kits and Proteins for MAN1A2
     Custom Antibody / Protein Production Service
     Bulk Purchasing
     Advantages of Rabbit Monoclonal antibodies
     Abcam protocols and scientific support
     Browse ProSpec Recombinant Proteins




     MAN1A2 Proteins, Antibodies, CLIAs, and ELISAs
     Search LifeMap BioReagents cell lines for MAN1A2
     Gene Synthesis
     Protein Engineering
     Variant Library Synthesis
     Codon Optimization
     Protein Production and Purification
     Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MAN1A2
     SwitchGear 3'UTR luciferase reporter plasmids for MAN1A2
     SwitchGear Promoter luciferase reporter plasmids for MAN1A2
     Search ThermoFisher Antibodies for MAN1A2
     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat MAN1A2
           
    GeneCards Homepage - Last full update: 19 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 26 Apr 2013

    View Random Gene

    Category
    VWF
    (GIFTS: 73)
    von Willebrand factor
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


    Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

    Hot genes      Disease genes      MAN1A2 gene at Home site.
    hostname: 356980-web2.xennexinc.com index build: 100 solr: 1.4