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Aliases for MAMDC2-AS1 Gene

Subcategory (RNA class) for MAMDC2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for MAMDC2-AS1 Gene

  • MAMDC2 Antisense RNA 1 2 3 5

External Ids for MAMDC2-AS1 Gene

Previous GeneCards Identifiers for MAMDC2-AS1 Gene

  • GC09M072701
  • GC09M070086

Summaries for MAMDC2-AS1 Gene

GeneCards Summary for MAMDC2-AS1 Gene

MAMDC2-AS1 (MAMDC2 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for MAMDC2-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MAMDC2-AS1 Gene

Genomics for MAMDC2-AS1 Gene

Regulatory Elements for MAMDC2-AS1 Gene

Enhancers for MAMDC2-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09H070255 1.6 FANTOM5 ENCODE dbSUPER 15.1 -82.3 -82332 5.8 HDGF PKNOX1 ARID4B SIN3A DMAP1 YY1 ZNF766 ZNF143 ZNF207 SP3 SMC5 MAMDC2-AS1 SMC5-AS1 PTAR1 MAMDC2 RPL24P8 GC09M070097
GH09H070159 1.3 FANTOM5 Ensembl ENCODE dbSUPER 15.4 +15.2 15189 1.8 GFI1B ATF7 ATF2 MAMDC2-AS1 MAMDC2 SMC5 PIR60342
GH09H070110 1.2 Ensembl ENCODE dbSUPER 15.1 +64.4 64403 2.2 SOX5 SOX13 CTCF ZNF654 SP5 FOXA3 ZIC2 RAD21 RCOR2 ZNF143 MAMDC2-AS1 PIR60342 GC09M070050
GH09H070417 2.1 FANTOM5 Ensembl ENCODE dbSUPER 8.3 -244.2 -244249 5.6 PKNOX1 FOXA2 ARNT ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 SMC5 SMC5-AS1 MAMDC2-AS1 KLF9 LOC101927086 LOC105376079
GH09H070136 0.7 ENCODE dbSUPER 24.8 +39.3 39302 1.1 JUND JUN MAMDC2-AS1 SMC5 PIR60342 GC09M070050
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MAMDC2-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MAMDC2-AS1 Gene

Genomic Locations for MAMDC2-AS1 Gene
141,968 bases
Minus strand

Genomic View for MAMDC2-AS1 Gene

Genes around MAMDC2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MAMDC2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MAMDC2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MAMDC2-AS1 Gene

Proteins for MAMDC2-AS1 Gene

Post-translational modifications for MAMDC2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MAMDC2-AS1 Gene

Domains & Families for MAMDC2-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MAMDC2-AS1 Gene

Function for MAMDC2-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MAMDC2-AS1 Gene

Localization for MAMDC2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MAMDC2-AS1 Gene

Pathways & Interactions for MAMDC2-AS1 Gene

SuperPathways for MAMDC2-AS1 Gene

No Data Available

Interacting Proteins for MAMDC2-AS1 Gene

Gene Ontology (GO) - Biological Process for MAMDC2-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for MAMDC2-AS1 Gene

Drugs & Compounds for MAMDC2-AS1 Gene

No Compound Related Data Available

Transcripts for MAMDC2-AS1 Gene

mRNA/cDNA for MAMDC2-AS1 Gene

(23) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MAMDC2-AS1 Gene

No ASD Table

Relevant External Links for MAMDC2-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MAMDC2-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MAMDC2-AS1 Gene

genes like me logo Genes that share expression patterns with MAMDC2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MAMDC2-AS1 Gene

Orthologs for MAMDC2-AS1 Gene

Evolution for MAMDC2-AS1 Gene

Gene Tree for MAMDC2-AS1 (if available)
Gene Tree for MAMDC2-AS1 (if available)

No data available for Orthologs for MAMDC2-AS1 Gene

Paralogs for MAMDC2-AS1 Gene

No data available for Paralogs for MAMDC2-AS1 Gene

Variants for MAMDC2-AS1 Gene

Sequence variations from dbSNP and Humsavar for MAMDC2-AS1 Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type
rs112914906 -- 70,168,817(+) TTTAG(-/CT)CTCTG intron-variant
rs138612515 -- 70,160,867(+) GAAGC(-/TTG)TTGTA intron-variant
rs139109269 -- 70,163,212(+) CTTCA(-/GGGCTTCT)AGGAT intron-variant
rs200557282 -- 70,160,408(+) TGTCA(G/T)CTTAG intron-variant
rs34029718 -- 70,163,952(+) GTCTC(-/A)AAAAA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for MAMDC2-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv6553 CNV insertion 18451855
nsv1047862 CNV gain 25217958

Relevant External Links for MAMDC2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MAMDC2-AS1 Gene

Disorders for MAMDC2-AS1 Gene

Relevant External Links for MAMDC2-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for MAMDC2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MAMDC2-AS1 Gene

Publications for MAMDC2-AS1 Gene

No publications were found for MAMDC2-AS1 Gene.

Products for MAMDC2-AS1 Gene

Sources for MAMDC2-AS1 Gene

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