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Aliases & Descriptions for MALT1
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases DKFZp434L132 2 EC 3.4.22.- 3 MLT 2 , 3 , 5 MLT1 2 Paracaspase 3 paracaspase 2
Descriptions MALT associated translocation 2 MALT lymphoma-associated translocation 3 MALT-lymphoma associated translocation 2 caspase-like protein 2 mucosa associated lymphoid tissue lymphoma translocation gene 1 2 mucosa associated lymphoid tissue lymphoma translocation protein 1 2
Search outside databases for aliases for MALT1 genePrevious GC identifers: GC18P056267 GC18P056123 GC18P054487
Summaries for MALT1 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for MALT1 : This gene has been found to be recurrently rearranged in chromosomal translocation with two othergenes - baculoviral IAP repeat-containing protein 3 (also known as apoptosis inhibitor 2) andimmunoglobulin heavy chain locus - in mucosa-associated lymphoid tissue lymphomas. The proteinencoded by this gene may play a role in NF-kappaB activation. Two alternatively spliced transcriptvariants encoding different isoforms have been described for this gene. [provided by RefSeq] UniProtKB/Swiss-Prot: MALT1_HUMAN, Q9UDY8 Function : Enhances BCL10-induced activation of NF-kappa-B. Involved in nuclear export of BCL10.Binds to TRAF6, inducing TRAF6 oligomerization and activation of its ligase activity. Hasubiquitin ligase activity. MALT1-dependent BCL-10 cleavage plays an important role in T-cellantigen receptor-induced integrin adhesion
Gene Wiki entry for MALT1
Genomic Location for MALT1
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the MALT1 gene Entrez Gene cytogenetic band: 18q21 Ensembl cytogenetic band: 18q21.32 HGNC cytogenetic band: 18q21 MALT1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 18 GeneLoc Exon Structure
GeneLoc location for GC18P054489:
(about GC identifiers )
Start:
54,489,598 bp from pter
End:
54,568,350 bp from pter
Size:
78,753 bases
Orientation:
plus strand
RefSeq DNA sequence: NC_000018.8 NT_025028.13 Proteins for MALT1
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: MALT1_HUMAN, Q9UDY8 (See
protein sequence )Recommended Name: Mucosa-associated lymphoid tissue lymphoma translocation protein 1 Size : 824 amino acids; 92272 Da
Subunit : Binds through its Ig-like domains to BCL10. Forms oligomers which bind to TRAF6
Subcellular location : Cytoplasm, perinuclear region. Nucleus. Note=Shuttles between the nucleus andcytoplasm. Found in perinuclear structures together with BCL10
PDB structure from and Proteopedia : 2G7R (3D)
 3BFO (3D)
 
Secondary accessions : Q9NTB7 Q9ULX4Alternative splicing : 2 isoforms : Q9UDY8-1 Q9UDY8-2
Post-translational modifications:
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (2 alternative transcripts):
NP_006776.1 NP_776216.1 ENSEMBL proteins: ENSP00000319279 ENSP00000304161 Human Recombinant Proteins               OriGene Purified Recombinant Human Protein: MALT1 4 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for MALT1: Assays for MALT1:
Protein
Domains/ Families for MALT1(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry Q9UDY8 ProtoNet protein and cluster: Q9UDY8
2 Blocks protein families : IPB001309 Caspase-1 IPB003598 Immunoglobulin C-2 type UniProtKB/Swiss-Prot: MALT1_HUMAN, Q9UDY8 Similarity : Belongs to the peptidase C14B familySimilarity : Contains 1 death domainSimilarity : Contains 2 Ig-like C2-type (immunoglobulin-like) domains
Gene Function for MALT1
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
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Millipore ,
OriGene , and/or
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siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_173844 Applied Biosystems Silencer ® siRNAs for MALT1 Sigma-Aldrich siRNA for MALT1 Sigma-Aldrich shRNA Panels and shRNA for MALT1 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_006785                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_006785                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_006785  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_006785 UniProtKB/Swiss-Prot: MALT1_HUMAN, Q9UDY8 Function : Enhances BCL10-induced activation of NF-kappa-B. Involved in nuclear export of BCL10.Binds to TRAF6, inducing TRAF6 oligomerization and activation of its ligase activity. Hasubiquitin ligase activity. MALT1-dependent BCL-10 cleavage plays an important role in T-cellantigen receptor-induced integrin adhesion Enzyme Number (IUBMB): EC 3.4.22.-
Genatlas biochemistry entry for MALT1 :mucosa associated lymphoid tissue rearranged with API2 in the t(11;18)(q21;q21) in extranodalmarginal zone B-cell lymphomas,in low-grade B cell lymphoma of mucosa associated lymphoid tissue
2 MGI mutant phenotypes (inferred from 2 alleles ) (MGI details for Malt1) :5/6 Gene Ontology (GO) molecular function terms (links to tree view) (see all 6
):
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Pathways & Interactions for MALT1
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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4 Sigma-Aldrich "Your Favorite Gene" Pathways for MALT1 (Your Favorite Gene powered by Ingenuity) Gene Network CentralTM Interacting Genes and Proteins Network for MALT1 5/39 Interacting proteins for MALT1 (ENSP00000319279 3 Q9UDY8 1 , 2 ) via UniProtKB, MINT, and/or STRING (see all 39
)About this table 5/13 Gene Ontology (GO) biological process terms (links to tree view) (see all 13
):
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Drugs & Compounds for MALT1 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for MALT1 2 Novoseek chemical compound relationships for MALT1 gene
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Transcripts for MALT1(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_173844 Sigma-Aldrich siRNA for MALT1 Sigma-Aldrich shRNA Panels and shRNA for MALT1 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_006785 NM_173844
REFSEQ mRNAs for MALT1 gene (2 alternative transcripts): NM_006785.2 NM_173844.1
Applied Biosystems TaqMan ® Gene Expression Assays: NM_006785 NM_173844
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_006785                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_006785                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_006785  
Additional cDNA sequence: AB026118.1 AF070528.1 AF130356.2 AF316597.1 AK024859.1 AK291386.1 AL137399.1 BC030143.2
8 DOTS entries : DT.95378868 DT.409881 DT.95378865 DT.455907 DT.100022175 DT.102830301 DT.408942 DT.99949626
24/132 AceView cDNA sequences (see all 132
):AA781565 AW292944 AA767805 AL599422 AK092004 BU164882 BQ006885 BQ130948 CA447544 NM_173844 BM724275 AA281201 BM680409 AI139811 AL137399 AA687848 AF316597 BQ023987 BU753389 BC030143 AB026118 AA706088 CB129946 NM_006785
highest scoring ESTs for MALT1 :AB026118 AF070528 AA283928 AA402144 AF316597 AI492489 AI685199 AI768778 AI824040 AK024859
Unigene Cluster for MALT1: Mucosa associated lymphoid tissue lymphoma translocation gene 1 Hs.601217 [show with all ESTs ] Unigene Representative Sequence: NM_006785 GeneLoc Exon Structure 2 Ensembl transcripts including schematic representations : ENST00000348428
ENST00000345724
Expression for MALT1
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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MALT1 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for MALT1 1 / 2 / 3
9 probe-sets matching MALT1 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: GTGATAGACTSOURCE GeneReport for Unigene cluster: Hs.601217 Expression variation in blood from EXPOLDB for MALT1
UniProtKB/Swiss-Prot: MALT1_HUMAN, Q9UDY8 Tissue specificity : Highly expressed in peripheral blood mononuclear cells. Detected at lowerlevels in bone marrow, thymus and lymph node, and at very low levels in colon and lung
Orthologs for MALT1
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for MALT1 gene from 5/8 species (see all 8
)
About this table Species with no ortholog for MALT1 ENSEMBL Gene Tree for MALT1 Paralogs for MALT1 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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SNPs/Variants for MALT1 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for MALT1 (up to first 250kb)
Disorders & Mutations for MALT1
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 604860 UniProtKB/Swiss-Prot: MALT1_HUMAN, Q9UDY8
A chromosomal aberration involving MALT1 is recurrent in low-grade mucosa-associatedlymphoid tissue (MALT lymphoma). Translocation t(11;18)(q21;q21) with BIRC2. This translocation isfound in approximately 50% of cytogenetically abnormal low-grade MALT lymphoma
9 Novoseek disease relationships for MALT1 gene
Disease
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
malt lymphoma
93.54
88
15682443 (8), 14760068 (4), 10523859 (3), 11090634 (3) (see all 40 )
lymphoma b-cell
80.12
27
18367485 (4), 14652825 (3), 11066071 (2), 16804917 (2) (see all 16 )
lymphoma
69.98
12
11066071 (1), 12560219 (1), 10702396 (1), 17199743 (1) (see all 9 )
chromosomal aberrations
61.74
10
19080537 (2), 14760068 (2), 16194887 (1), 10702396 (1) (see all 7 )
trisomy
56.24
10
15047736 (3), 18974375 (1), 17222250 (1), 18234275 (1) (see all 5 )
lymphoma non-hodgkins
41.99
3
12560219 (2), 15598810 (1)
tumors
13.73
5
12647364 (1), 14754896 (1), 17607378 (1)
necrosis
0.00
1
14754896 (1)
metastasis
0.00
1
15067352 (1)
About this table Human Genome Epidemiology Navigator: MALT1 (1 document)
Medical News for MALT1 (Possibly Related Articles in
Doctor's Guide )
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Publications for MALT1 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/135 PubMed articles for MALT1 gene (see all 135
): The apoptosis inhibitor gene API2 and a novel 18q gene, MLT, are recurrently rearranged in the t(11;18)(q21;q21) associated with mucosa-associated lymphoid tissue lymphomas. (PubMed id 10339464) 1, 2, 3, 4 Dierlamm J.... Marynen P. (1999) A novel gene, MALT1 at 18q21, is involved in t(11;18)(q21;q21) found in low-grade B-cell lymphoma of mucosa-associated lymphoid tissue. (PubMed id 10523859) 1, 2, 3, 4 Akagi T.... Seto M. (1999) The TRAF6 ubiquitin ligase and TAK1 kinase mediate IKK activation by BCL10 and MALT1 in T lymphocytes. (PubMed id 15125833) 1, 3, 4 Sun L.... Chen Z.J. (2004) MALT1 contains nuclear export signals and regulates cytoplasmic localization of BCL10. (PubMed id 16123224) 1, 3, 4 Nakagawa M.... Seto M. (2005) Identification of paracaspases and metacaspases. Two ancient families of caspase-like proteins, one of which plays a key role in MALT lymphoma. (PubMed id 11090634) 1, 3, 4 Uren A.G.... Dixit V.M. (2000) Bcl10 and MALT1, independent targets of chromosomal translocation in MALT lymphoma, cooperate in a novel NF-kappa B signaling pathway. (PubMed id 11262391) 1, 3, 4 Lucas P.C.... Nunez G. (2001) API2-MALT1 chimeric transcripts involved in mucosa-associated lymphoid tissue type lymphoma predict heterogeneous products. (PubMed id 10702396) 1, 3, 4 Motegi M.... Seto M. (2000) Bcl10 activates the NF-kappaB pathway through ubiquitination of NEMO. (PubMed id 14695475) 3, 4 Zhou H.... Dixit V.M. (2004) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 3, 4 Gerhard D.S....Malek J. (2004) API1-MALT1-MLT is involved in mucosa-associated lymphoid tissue lymphoma with t(11;18).(q21;q21). (PubMed id 10610122) 3, 4 Suzuki H.... Seto M. (1999)
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Genome Databases showing MALT1
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing MALT1
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Specialized Databases showing MALT1 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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