MAL2 Gene
protein-coding GIFtS : 46
GCID: GC08 P120177
mal, T-cell differentiation protein 2 (gene/pseudogene)
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Aliasesfor MAL2 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Mal, T-Cell Differentiation Protein 2 (Gene/Pseudogene) 1 2 MAL Proteolipid Protein 22 MAL2 Proteolipid Protein2 Protein MAL22
Export aliases for MAL2 gene to outside databases Previous GC identifers: GC08P119207 GC08P120226 GC08P119889 GC08P120289 GC08P115541
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Summariesfor MAL2 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for MAL2 : This gene encodes a multispan transmembrane protein belonging to the MAL proteolipid family. The protein is a component of lipid rafts and, in polarized cells, it primarily localizes to endosomal structures beneath the apical membrane. It is required for transcytosis, an intracellular transport pathway used to deliver membrane-bound proteins and exogenous cargos from the basolateral to the apical surface. (provided by RefSeq, Jul 2008) UniProtKB/Swiss-Prot: MAL2_HUMAN, Q969L2 Function : Member of the machinery of polarized transport. Required for the indirect transcytotic route at the step ofthe egress of the transcytosing cargo from perinuclear endosomes in order for it to travel to the apical surface via a raft-dependent pathway Gene Wiki entry for MAL2
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Genomic Viewsfor MAL2 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000008.10 NC_018919.1 NT_008046.16 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the MAL2 gene promoter: AML1a FOXD3 Nkx2-5 XBP-1 LCR-F1 E47 Egr-4 C/EBPalpha S8 Cart-1 Other transcription factors Search SABiosciences Chromatin IP Primers for MAL2 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat MAL2
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 8q23 Ensembl cytogenetic band: 8q24.12 HGNC cytogenetic band: 8q23 MAL2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 8 GeneLoc Exon Structure
GeneLoc location for GC08P120177: view genomic region
(about GC identifiers )
Start:
120,177,273 bp from pter
End:
120,257,913 bp from pter
Size:
80,641 bases
Orientation:
plus strand
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Proteinsfor MAL2 gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: MAL2_HUMAN, Q969L2 (See
protein sequence )Recommended Name: Protein MAL2 Size : 176 amino acids; 19125 Da
Subunit : Interacts with TPD52L2
Subcellular location : Cell membrane; Multi-pass membrane protein. Apical cell membrane; Multi-pass membrane protein.Endomembrane system. Cytoplasm, perinuclear region. Note=Associated with lipid rafts. In polarized epithelial cells, restricted to the apical surface. In hepatocytes, as well as in polarized hepatoma Hep-G2 cells, found in the canalicular membrane, equivalent to the apical surface, beneath the canalicular actin cytoskeleton. In non-polarized Hep-G2 cells, distributed to the perinuclear region
Sequence caution : Sequence=BAD18789.1; Type=Frameshift; Positions=166;
Secondary accessions : B2R520 Q6ZMD9Explore the universe of human proteins at neXtProt for MAL2: NX_Q969L2 Post-translational modifications:
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_Q969L2 MAL2 Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins: NP_443118.1 Human Recombinant Protein Products: Gene Ontology (GO): 4 cellular component terms (GO ID links to tree view) : About this table
MAL2 for ontologies About GeneDecksing MAL2 Antibody Products: Assay Products for MAL2:
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Protein
Domains / Familiesfor MAL2 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
MAL2 for domains About GeneDecksing 3 InterPro domains/families :
Graphical View of Domain Structure for InterPro Entry Q969L2 ProtoNet protein and cluster: Q969L2
1 Blocks protein family : IPB008253 Marvel UniProtKB/Swiss-Prot: MAL2_HUMAN, Q969L2 Similarity : Belongs to the MAL familySimilarity : Contains 1 MARVEL domain
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Functionfor MAL2 gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: UniProtKB/Swiss-Prot: MAL2_HUMAN, Q969L2 Function : Member of the machinery of polarized transport. Required for the indirect transcytotic route at the step ofthe egress of the transcytosing cargo from perinuclear endosomes in order for it to travel to the apical surface via a raft-dependent pathway
Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for MAL2 (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for MAL2OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: MAL2 (NM_020709 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for MAL2 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat MAL2
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MAL2
Gene Ontology (GO): 1 molecular function term (GO ID links to tree view) : About this table
MAL2 for ontologies About GeneDecksing Animal Models: Mouse knock-out Mal2 tm1Lex for MAL2 1 MGI phenotypic allele for Mal2 (no phenotypes)
MAL2 for phenotypes About GeneDecksing
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Pathways & Interactionsfor MAL2 gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Interactions: SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for MAL2 4 Interacting proteins for MAL2 (Q969L2 3 ) via UniProtKB, MINT, STRING, and/or I2D About this table
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Drugs & Compoundsfor MAL2 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section Browse Tocris compounds for MAL2 Search CenterWatch for drugs/clinical trials and news about MAL2
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Transcriptsfor MAL2 gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for MAL2 gene: NM_052886.2 Unigene Cluster for MAL2:
Mal, T-cell differentiation protein 2 (gene/pseudogene) Hs.201083 [show with all ESTs ] Unigene Representative Sequence: NM_052886 5 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000522112(lincRNA) ENST00000534619(lincRNA) ENST00000521748(lincRNA) (uc003yop.3 ) ENST00000531508(lincRNA) ENST00000276681(lincRNA) Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for MAL2 (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for MAL2OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: MAL2 (NM_020709 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for MAL2 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat MAL2
Additional cDNA sequence: AK172820.1 AK312030.1 AL117612.1 AY007723.1 BC012367.1
7 DOTS entries : DT.448009 DT.99999596
DT.100680527 DT.121481771 DT.121481797 DT.121481773 DT.95074333 24/351 AceView cDNA sequences (see all 351 ):
AI608598 AI270322 AA046853 AA173971 AI198729 BG499681 CB851506 AI493121 AI433931 AV704007 BM771274 CB133884 AI923647 AA173597 BM771198 F04763 AW473207 AI358673 BQ631354 R15940 AW780300 AA583406 AW150676 H51475 GeneLoc Exon Structure
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Expression for MAL2 gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section MAL2 expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: ATGAAAAGAA
About this image MAL2 expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table See MAL2 Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for MAL2 SOURCE GeneReport for Unigene cluster: Hs.201083 UniProtKB/Swiss-Prot: MAL2_HUMAN, Q969L2 Tissue specificity : Predominantly expressed in kidney, lung, and liver. Also found in thyroid gland, stomach and, atlower levels in testis and small intestine SABiosciences Custom PCR Arrays for MAL2 Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for MAL2Browse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat MAL2 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat MAL2 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat MAL2 In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MAL2
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Orthologsfor MAL2 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of chordates.
Orthologs for MAL2 gene from 3/7 species (see all 7 ) About this table
ENSEMBL Gene Tree for MAL2 (if available)TreeFam Gene Tree for MAL2 (if available)
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Paralogsfor MAL2 gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section --
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Genomic Variantsfor MAL2 gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 8 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for MAL2 (120177273 - 120257913 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV): 1 variation for MAL2 1 CNV : 3747
SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing MAL2
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Disorders
/ Diseasesfor MAL2 gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database , Novoseek ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
MAL2 for disorders About GeneDecksing
OMIM gene information: 609684
OMIM disorders : --13 diseases for MAL2 : About MalaCards chromophobe renal cell carcinoma renal cell carcinoma childhood leukemia ovarian carcinoma carcinoma alzheimer's disease breast carcinoma cholangiocarcinoma prostate cancer leukemia prostatitis thyroiditis hepatitis 2 Novoseek disease relationships for MAL2 gene About this table
Disease
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
tumors
15.4
2
15168355 (1), 14729876 (1)
carcinoma
8.97
2
14576188 (1), 15168355 (1)
Export disorders for MAL2 gene to outside databases
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Publicationsfor MAL2 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for MAL2 gene, integrated from 9 sources (see all 25 ): (articles sorted by number of sources associating them with MAL2) Utopia : connect your pdf to the dynamic world of online information
Identification of MAL2, a novel member of the mal proteolipid family, though interactions with TPD52-like proteins in the yeast two-hybrid system. (PubMed id 11549320) 1 , 2 , 3, 9 Wilson S.H.D.... Byrne J.A. (2001) Expression and distribution of MAL2, an essential element of the machinery for basolateral-to-apical transcytosis, in human thyroid epithelial cells. (PubMed id 14576188) 1 , 2 , 9 Marazuela M.... Alonso M.A. (2004) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 1 , 2 Gerhard D.S....Malek J. (2004) Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039) 1 , 2 Ota T.... Sugano S. (2004) MAL2, a novel raft protein of the MAL family, is an essential component of the machinery for transcytosis in hepatoma HepG2 cells. (PubMed id 12370246) 1 , 2 de Marco M.C.... Alonso M.A. (2002) Expression of MAL2, an integral protein component of the machinery for basolateral-to-apical transcytosis, in human epithelia. (PubMed id 14729876) 1 , 9 Marazuela M....Alonso M.A. (2004) Expression of MAL and MAL2, two elements of the protein machinery for raft-mediated transport, in normal and neoplastic human tissue. (PubMed id 15168355) 1 , 9 Marazuela M. and Alonso M.A. (2004) Characterization of the MAL2-positive compartment in oligodendrocytes. (PubMed id 19683524) 1 , 9 Bello-Morales R....LA^pez-Guerrero J.A. (2009) Caveolin-1 and MAL are located on prostasomes secreted by the prostate cancer PC-3 cell line. (PubMed id 15466889) 1 , 9 Llorente A....Alonso M.A. (2004) Protein phosphatase 1a interacting proteins in the hum an brain. (PubMed id 22321011) 1 Esteves S.L....da Cruz e Silva E.F. (2012)
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External Searches for MAL2 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing MAL2 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing MAL2 gene
(According to HUGE )
About This Section --
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Specialized Databases showing MAL2 gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
Name Description
PharmGKB entry for MAL2 Pharmacogenomics, SNPs, Pathways
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About This Section Patent Information for MAL2 gene: Search GeneIP for patents involving MAL2 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor MAL2 gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
Browse OriGene Antibodies OriGene shRNA RFP for MAL2 OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for MAL2 OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for MAL2 OriGene Protein Over-expression Lysate for MAL2 Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for MAL2 OriGene 3'-UTR Clone for MAL2 OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for MAL2 OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for MAL2 Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs Browse OriGene full length recombinant human proteins expressed in human HEK293 cells OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for MAL2 OriGene Custom Protein Services for MAL2 OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat MAL2 QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing MAL2 QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat MAL2 QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat MAL2 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat MAL2 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat MAL2
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MAL2 Proteins, Antibodies, CLIAs, and ELISAs
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MAL2
Search ThermoFisher Antibodies for MAL2
Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat MAL2
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Aliases for MAL2
Databases for MAL2
Disorders / Diseases for MAL2
Domains / Families for MAL2
Drugs / Compounds for MAL2
Expression for MAL2
Function for MAL2
Genomic Views for MAL2
Intellectual Property for MAL2
Orthologs for MAL2
Paralogs for MAL2
Pathways / Interactions for MAL2
Products for MAL2
Proteins for MAL2
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Summaries for MAL2
Transcripts for MAL2
Variants for MAL2
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