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Aliases for MAGI2-IT1 Gene

Subcategory (RNA class) for MAGI2-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for MAGI2-IT1 Gene

  • MAGI2 Intronic Transcript 1 2 3 5
  • MAGI2 Intronic Transcript 1 (Non-Protein Coding) 2 3
  • MAGI2 Intronic Transcript (Non-Protein Coding) 2 3
  • Platelet Receptor For Type III Collagen, 47 KDa 3
  • Platelet Receptor For Type III Collagen 2
  • MAGI2IT1 3
  • MAGI2-IT 3
  • MAGI2IT 3
  • 47 KDa 2
  • PR47 3

External Ids for MAGI2-IT1 Gene

Previous HGNC Symbols for MAGI2-IT1 Gene

  • MAGI2-IT

Previous GeneCards Identifiers for MAGI2-IT1 Gene

  • GC07U903137
  • GC07M078531

Summaries for MAGI2-IT1 Gene

GeneCards Summary for MAGI2-IT1 Gene

MAGI2-IT1 (MAGI2 Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MAGI2-IT1 Gene

Genomics for MAGI2-IT1 Gene

Regulatory Elements for MAGI2-IT1 Gene

Enhancers for MAGI2-IT1 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around MAGI2-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Location for MAGI2-IT1 Gene

Chromosome:
7
Start:
78,901,275 bp from pter
End:
79,000,298 bp from pter
Size:
99,024 bases
Orientation:
Minus strand

Genomic View for MAGI2-IT1 Gene

Genes around MAGI2-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MAGI2-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MAGI2-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for MAGI2-IT1 Gene

Proteins for MAGI2-IT1 Gene

Post-translational modifications for MAGI2-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MAGI2-IT1 Gene

Domains & Families for MAGI2-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MAGI2-IT1 Gene

Function for MAGI2-IT1 Gene

Phenotypes for MAGI2-IT1 Gene

GenomeRNAi human phenotypes for MAGI2-IT1:
genes like me logo Genes that share phenotypes with MAGI2-IT1: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MAGI2-IT1 Gene

Localization for MAGI2-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MAGI2-IT1 Gene

Pathways & Interactions for MAGI2-IT1 Gene

SuperPathways for MAGI2-IT1 Gene

No Data Available

Interacting Proteins for MAGI2-IT1 Gene

Gene Ontology (GO) - Biological Process for MAGI2-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MAGI2-IT1 Gene

Drugs & Compounds for MAGI2-IT1 Gene

No Compound Related Data Available

Transcripts for MAGI2-IT1 Gene

mRNA/cDNA for MAGI2-IT1 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MAGI2-IT1 Gene

MAGI2 intronic transcript 1 (non-protein coding):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MAGI2-IT1 Gene

No ASD Table

Relevant External Links for MAGI2-IT1 Gene

GeneLoc Exon Structure for
MAGI2-IT1
ECgene alternative splicing isoforms for
MAGI2-IT1

Expression for MAGI2-IT1 Gene

mRNA expression in normal human tissues for MAGI2-IT1 Gene

mRNA differential expression in normal tissues according to GTEx for MAGI2-IT1 Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x6.7), Testis (x6.5), and Brain - Spinal cord (cervical c-1) (x4.4).

SOURCE GeneReport for Unigene cluster for MAGI2-IT1 Gene Hs.683780

genes like me logo Genes that share expression patterns with MAGI2-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for MAGI2-IT1 Gene

Orthologs for MAGI2-IT1 Gene

Evolution for MAGI2-IT1 Gene

ENSEMBL:
Gene Tree for MAGI2-IT1 (if available)
TreeFam:
Gene Tree for MAGI2-IT1 (if available)

No data available for Orthologs for MAGI2-IT1 Gene

Paralogs for MAGI2-IT1 Gene

No data available for Paralogs for MAGI2-IT1 Gene

Variants for MAGI2-IT1 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for MAGI2-IT1 Gene

Disorders for MAGI2-IT1 Gene

Relevant External Links for MAGI2-IT1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MAGI2-IT1

No disorders were found for MAGI2-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MAGI2-IT1 Gene

Publications for MAGI2-IT1 Gene

  1. Cloning, characterization, and functional studies of a 47-kDa platelet receptor for type III collagen. (PMID: 12110681) Chiang T.M. … Woo-Rasberry V. (J. Biol. Chem. 2002) 2 3 67

Products for MAGI2-IT1 Gene

Sources for MAGI2-IT1 Gene

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