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Aliases for MAGEB17 Gene

Aliases for MAGEB17 Gene

  • Melanoma Antigen Family B17 2 3
  • Melanoma Antigen Family B, 17 (Pseudogene) 2

External Ids for MAGEB17 Gene

Summaries for MAGEB17 Gene

GeneCards Summary for MAGEB17 Gene

MAGEB17 (Melanoma Antigen Family B17) is a Protein Coding gene. An important paralog of this gene is MAGED1.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MAGEB17 Gene

Genomics for MAGEB17 Gene

Genomic Location for MAGEB17 Gene

Start:
16,167,481 bp from pter
End:
16,171,464 bp from pter
Size:
3,984 bases
Orientation:
Plus strand

Genomic View for MAGEB17 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MAGEB17 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MAGEB17 Gene

Regulatory Elements for MAGEB17 Gene

Proteins for MAGEB17 Gene

  • Protein details for MAGEB17 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A8MXT2-MAGBH_HUMAN
    Recommended name:
    Melanoma-associated antigen B17
    Protein Accession:
    A8MXT2
    Secondary Accessions:
    • A6NE98

    Protein attributes for MAGEB17 Gene

    Size:
    336 amino acids
    Molecular mass:
    37578 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=EAW98911.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};

neXtProt entry for MAGEB17 Gene

Proteomics data for MAGEB17 Gene at MOPED

Post-translational modifications for MAGEB17 Gene

No Post-translational modifications

Other Protein References for MAGEB17 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for MAGEB17 Gene

Domains for MAGEB17 Gene

Protein Domains for MAGEB17 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for MAGEB17 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

A8MXT2

UniProtKB/Swiss-Prot:

MAGBH_HUMAN
Domain:
  • Contains 1 MAGE domain.:
    • A8MXT2
genes like me logo Genes that share domains with MAGEB17: view

No data available for Gene Families for MAGEB17 Gene

Function for MAGEB17 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MAGEB17 Gene

Localization for MAGEB17 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for MAGEB17 Gene COMPARTMENTS Subcellular localization image for MAGEB17 gene
Compartment Confidence
nucleus 3
cytosol 1
endoplasmic reticulum 1
mitochondrion 1
plasma membrane 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for MAGEB17 Gene

Pathways for MAGEB17 Gene

SuperPathways for MAGEB17 Gene

No Data Available

Interacting Proteins for MAGEB17 Gene

Gene Ontology (GO) - Biological Process for MAGEB17 Gene

None

No data available for Pathways by source for MAGEB17 Gene

Transcripts for MAGEB17 Gene

mRNA/cDNA for MAGEB17 Gene

(2) REFSEQ mRNAs :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MAGEB17 Gene

No ASD Table

Relevant External Links for MAGEB17 Gene

GeneLoc Exon Structure for
MAGEB17
ECgene alternative splicing isoforms for
MAGEB17

Expression for MAGEB17 Gene

mRNA expression in normal human tissues for MAGEB17 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for MAGEB17 Gene

This gene is overexpressed in Esophagus - Gastroesophageal Junction (9.3), Pancreas (7.9), Testis (7.8), and Esophagus - Muscularis (6.4).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for MAGEB17 Gene

genes like me logo Genes that share expressions with MAGEB17: view

No data available for mRNA Expression by UniProt/SwissProt for MAGEB17 Gene

Orthologs for MAGEB17 Gene

This gene was present in the common ancestor of mammals.

Orthologs for MAGEB17 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia MAGEB17 35
  • 98.31 (n)
  • 97.32 (a)
MAGEB17 36
  • 97 (a)
OneToOne
cow
(Bos Taurus)
Mammalia -- 36
  • 49 (a)
ManyToMany
LOC618686 35
  • 68.94 (n)
  • 55.68 (a)
dog
(Canis familiaris)
Mammalia LOC100684355 35
  • 65.22 (n)
  • 55.84 (a)
MAGEB10 36
  • 47 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm5072 35
  • 61.24 (n)
  • 46.1 (a)
Mageb5 16
Species with no ortholog for MAGEB17:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for MAGEB17 Gene

ENSEMBL:
Gene Tree for MAGEB17 (if available)
TreeFam:
Gene Tree for MAGEB17 (if available)

Paralogs for MAGEB17 Gene

genes like me logo Genes that share paralogs with MAGEB17: view

Variants for MAGEB17 Gene

Sequence variations from dbSNP and Humsavar for MAGEB17 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type MAF
rs3840972 -- 16,168,911(+) AAGGT(-/A)AAAAA intron-variant
rs3903014 -- 16,169,562(+) TTTCC(A/G)GGTAA intron-variant
rs3903068 -- 16,169,607(+) CTGAG(G/T)AGAGC intron-variant
rs7065051 -- 16,168,704(+) AGGTC(C/G)CATTG intron-variant
rs7066555 -- 16,166,159(+) AATAC(C/G)GTGTA upstream-variant-2KB

Relevant External Links for MAGEB17 Gene

HapMap Linkage Disequilibrium report
MAGEB17

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for MAGEB17 Gene

Disorders for MAGEB17 Gene

Relevant External Links for MAGEB17

Genetic Association Database (GAD)
MAGEB17
genes like me logo Genes that share disorders with MAGEB17: view

No data available for UniProtKB/Swiss-Prot for MAGEB17 Gene

Publications for MAGEB17 Gene

  1. An overview of the MAGE gene family with the identification of all human members of the family. (PMID: 11454705) Chomez P. … Lucas S. (Cancer Res. 2001) 2 3
  2. The DNA sequence of the human X chromosome. (PMID: 15772651) Ross M.T. … Bentley D.R. (Nature 2005) 3 4

Products for MAGEB17 Gene

Sources for MAGEB17 Gene

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