Free for academic non-profit institutions. Other users need a Commercial license

Aliases for MAGEA9B Gene

Aliases for MAGEA9B Gene

  • Melanoma Antigen Family A9B 2 3
  • Cancer/Testis Antigen 1.9 3 4
  • MAGE-9 Antigen 3 4
  • CT1.9 3 4
  • Melanoma Antigen Family A, 9B 3
  • Melanoma-Associated Antigen 9 3
  • MAGEA9 MAGEA9B 4
  • MAGEA9A 4
  • MAGE9 4

External Ids for MAGEA9B Gene

Previous GeneCards Identifiers for MAGEA9B Gene

  • GC0XM148471
  • GC00U922286
  • GC0XM148663

Summaries for MAGEA9B Gene

Entrez Gene Summary for MAGEA9B Gene

  • MAGEA9B is a duplication of the MAGEA9 gene (MIM 300342) on chromosome Xq28. The 2 copies are separated by about 194 kb (Hartz, 2009).[supplied by OMIM, Mar 2009]

GeneCards Summary for MAGEA9B Gene

MAGEA9B (Melanoma Antigen Family A9B) is a Protein Coding gene. Diseases associated with MAGEA9B include terminal osseous dysplasia and enophthalmos. An important paralog of this gene is MAGEA9.

UniProtKB/Swiss-Prot for MAGEA9B Gene

  • Not known, though may play a role in embryonal development and tumor transformation or aspects of tumor progression

No data available for Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MAGEA9B Gene

Genomics for MAGEA9B Gene

Regulatory Elements for MAGEA9B Gene

Genomic Location for MAGEA9B Gene

Start:
149,581,653 bp from pter
End:
149,587,468 bp from pter
Size:
5,816 bases
Orientation:
Minus strand

Genomic View for MAGEA9B Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MAGEA9B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MAGEA9B Gene

Proteins for MAGEA9B Gene

  • Protein details for MAGEA9B Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P43362-MAGA9_HUMAN
    Recommended name:
    Melanoma-associated antigen 9
    Protein Accession:
    P43362
    Secondary Accessions:
    • A8K8A7
    • Q7Z5K4
    • Q92910

    Protein attributes for MAGEA9B Gene

    Size:
    315 amino acids
    Molecular mass:
    35088 Da
    Quaternary structure:
    No Data Available

neXtProt entry for MAGEA9B Gene

Proteomics data for MAGEA9B Gene at MOPED

Post-translational modifications for MAGEA9B Gene

  • Ubiquitination at Lys243
  • Modification sites at PhosphoSitePlus

Other Protein References for MAGEA9B Gene

No data available for DME Specific Peptides for MAGEA9B Gene

Domains for MAGEA9B Gene

Protein Domains for MAGEA9B Gene

Suggested Antigen Peptide Sequences for MAGEA9B Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

P43362

UniProtKB/Swiss-Prot:

MAGA9_HUMAN :
  • P43362
Domain:
  • Contains 1 MAGE domain.
genes like me logo Genes that share domains with MAGEA9B: view

No data available for Gene Families for MAGEA9B Gene

Function for MAGEA9B Gene

Molecular function for MAGEA9B Gene

UniProtKB/Swiss-Prot Function: Not known, though may play a role in embryonal development and tumor transformation or aspects of tumor progression

Gene Ontology (GO) - Molecular Function for MAGEA9B Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003674 molecular_function ND --
GO:0005515 protein binding IPI 25416956
genes like me logo Genes that share ontologies with MAGEA9B: view

Animal Model Products

CRISPR Products

miRNA for MAGEA9B Gene

miRTarBase miRNAs that target MAGEA9B

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for MAGEA9B Gene

Localization for MAGEA9B Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for MAGEA9B Gene COMPARTMENTS Subcellular localization image for MAGEA9B gene
Compartment Confidence
cytosol 3
mitochondrion 1
nucleus 1
peroxisome 1
plasma membrane 1

Gene Ontology (GO) - Cellular Components for MAGEA9B Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005575 cellular_component ND --
genes like me logo Genes that share ontologies with MAGEA9B: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for MAGEA9B Gene

Pathways for MAGEA9B Gene

SuperPathways for MAGEA9B Gene

No Data Available

Interacting Proteins for MAGEA9B Gene

Selected Interacting proteins: P43362-MAGA9_HUMAN for MAGEA9B Gene via UniProtKB

Symbol External ID(s) Details
APPL1

Gene Ontology (GO) - Biological Process for MAGEA9B Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0008150 biological_process ND --
genes like me logo Genes that share ontologies with MAGEA9B: view

No data available for Pathways by source for MAGEA9B Gene

Transcripts for MAGEA9B Gene

mRNA/cDNA for MAGEA9B Gene

(5) Additional mRNA sequences :
(3) REFSEQ mRNAs :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MAGEA9B Gene

Melanoma antigen family A, 9B:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for MAGEA9B

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for MAGEA9B
  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MAGEA9B Gene

No ASD Table

Relevant External Links for MAGEA9B Gene

GeneLoc Exon Structure for
MAGEA9B
ECgene alternative splicing isoforms for
MAGEA9B

Expression for MAGEA9B Gene

mRNA expression in normal human tissues for MAGEA9B Gene

Integrated Proteomics: protein expression from ProteomicsDB, MOPED, and MaxQB for MAGEA9B Gene

SOURCE GeneReport for Unigene cluster for MAGEA9B Gene Hs.460974

mRNA Expression by UniProt/SwissProt for MAGEA9B Gene

P43362-MAGA9_HUMAN
Tissue specificity: Expressed in many tumors of several types, such as melanoma, head and neck squamous cell carcinoma, lung carcinoma and breast carcinoma, but not in normal tissues except for testes and placenta
genes like me logo Genes that share expressions with MAGEA9B: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA differential expression in normal tissues for MAGEA9B Gene

Orthologs for MAGEA9B Gene

Evolution for MAGEA9B Gene

ENSEMBL:
Gene Tree for MAGEA9B (if available)
TreeFam:
Gene Tree for MAGEA9B (if available)

No data available for Orthologs for MAGEA9B Gene

Paralogs for MAGEA9B Gene

Paralogs for MAGEA9B Gene

genes like me logo Genes that share paralogs with MAGEA9B: view

Variants for MAGEA9B Gene

Sequence variations from dbSNP and Humsavar for MAGEA9B Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type MAF
rs150704666 -- 149,583,706(+) CAAGA(C/G)GGCGG intron-variant
rs200294165 -- 149,588,813(+) ATGGG(G/T)TTTTT upstream-variant-2KB
rs201969621 -- 149,587,383(+) GCCTC(A/G)GCCAG intron-variant, upstream-variant-2KB
rs202146513 -- 149,583,088(+) CTGTG(G/T)GTTCC missense, reference
rs369965171 -- 149,585,846(+) TTCCC(G/T)AGGCT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for MAGEA9B Gene

Variant ID Type Subtype PubMed ID
nsv525908 CNV Gain 19592680
nsv518742 CNV Gain 19592680
nsv508809 CNV Insertion 20534489
nsv818041 CNV Gain 17921354

Relevant External Links for MAGEA9B Gene

HapMap Linkage Disequilibrium report
MAGEA9B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for MAGEA9B Gene

Disorders for MAGEA9B Gene

MalaCards: The human disease database

MalaCards: The human disease database. (2) Diseases for MAGEA9B Gene including...

Search for MAGEA9B Gene in MalaCards »

(1) University of Copenhagen DISEASES for MAGEA9B Gene

genes like me logo Genes that share disorders with MAGEA9B: view

No data available for UniProtKB/Swiss-Prot for MAGEA9B Gene

Publications for MAGEA9B Gene

  1. Structure, chromosomal localization, and expression of 12 genes of the MAGE family. (PMID: 7927540) De Plaen E. … Boon T. (Immunogenetics 1994) 3 4
  2. Molecular and phenotypic variation in patients with severe Hunter syndrome. (PMID: 9147653) Timms K.M. … Gibbs R.A. (Hum. Mol. Genet. 1997) 3 4
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  5. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3

Products for MAGEA9B Gene

Sources for MAGEA9B Gene

Back to Top

Content