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Aliases for MAFG-AS1 Gene

Subcategory (RNA class) for MAFG-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for MAFG-AS1 Gene

  • MAFG Antisense RNA 1 (Head To Head) 2 3 5
  • MAFG Antisense RNA 1 (Non-Protein Coding) 2
  • MAFG Antisense RNA 1 2

External Ids for MAFG-AS1 Gene

Previous GeneCards Identifiers for MAFG-AS1 Gene

  • GC17P079886

Summaries for MAFG-AS1 Gene

GeneCards Summary for MAFG-AS1 Gene

MAFG-AS1 (MAFG Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MAFG-AS1 Gene

Genomics for MAFG-AS1 Gene

Regulatory Elements for MAFG-AS1 Gene


Promoters for MAFG-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000099502 -429 2001 HDGF FOXA2 MLX ARNT CREB3L1 AGO1 ARID4B SIN3A FEZF1 DMAP1

Genomic Location for MAFG-AS1 Gene

Chromosome:
17
Start:
81,927,829 bp from pter
End:
81,930,753 bp from pter
Size:
2,925 bases
Orientation:
Plus strand

Genomic View for MAFG-AS1 Gene

Genes around MAFG-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MAFG-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MAFG-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MAFG-AS1 Gene

Proteins for MAFG-AS1 Gene

Post-translational modifications for MAFG-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MAFG-AS1 Gene

Domains & Families for MAFG-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MAFG-AS1 Gene

Function for MAFG-AS1 Gene

Phenotypes for MAFG-AS1 Gene

GenomeRNAi human phenotypes for MAFG-AS1:
genes like me logo Genes that share phenotypes with MAFG-AS1: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MAFG-AS1 Gene

Localization for MAFG-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MAFG-AS1 Gene

Pathways & Interactions for MAFG-AS1 Gene

SuperPathways for MAFG-AS1 Gene

No Data Available

Interacting Proteins for MAFG-AS1 Gene

Gene Ontology (GO) - Biological Process for MAFG-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MAFG-AS1 Gene

Transcripts for MAFG-AS1 Gene

mRNA/cDNA for MAFG-AS1 Gene

Unigene Clusters for MAFG-AS1 Gene

MAFG antisense RNA 1 (head to head):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MAFG-AS1 Gene

No ASD Table

Relevant External Links for MAFG-AS1 Gene

GeneLoc Exon Structure for
MAFG-AS1
ECgene alternative splicing isoforms for
MAFG-AS1

Expression for MAFG-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MAFG-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for MAFG-AS1 Gene

This gene is overexpressed in Testis (x5.9) and Pituitary (x5.1).

SOURCE GeneReport for Unigene cluster for MAFG-AS1 Gene:

Hs.336958
genes like me logo Genes that share expression patterns with MAFG-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MAFG-AS1 Gene

Orthologs for MAFG-AS1 Gene

Evolution for MAFG-AS1 Gene

ENSEMBL:
Gene Tree for MAFG-AS1 (if available)
TreeFam:
Gene Tree for MAFG-AS1 (if available)

No data available for Orthologs for MAFG-AS1 Gene

Paralogs for MAFG-AS1 Gene

No data available for Paralogs for MAFG-AS1 Gene

Variants for MAFG-AS1 Gene

Sequence variations from dbSNP and Humsavar for MAFG-AS1 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
rs1000129030 -- 81,930,705(+) AGCCA(A/G)GCAGA nc-transcript-variant
rs1000254063 -- 81,931,007(+) CACGC(G/T)CTGTG downstream-variant-500B
rs1001909276 -- 81,927,734(+) GTCAC(-/ATG)ATGTT upstream-variant-2KB
rs1002001150 -- 81,927,596(+) GCGGG(A/G)CAGGG upstream-variant-2KB, utr-variant-5-prime
rs1002029024 -- 81,926,472(+) TCCCT(A/G)CCCAG intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MAFG-AS1 Gene

Variant ID Type Subtype PubMed ID
esv1917158 CNV deletion 18987734
esv21913 CNV gain+loss 19812545
esv2716463 CNV deletion 23290073
esv29964 CNV loss 17803354
esv32874 CNV loss 17666407
nsv428351 CNV gain 18775914
nsv470620 CNV loss 18288195
nsv833569 CNV loss 17160897
nsv833571 CNV loss 17160897
nsv952392 CNV deletion 24416366

Relevant External Links for MAFG-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MAFG-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MAFG-AS1 Gene

Disorders for MAFG-AS1 Gene

Relevant External Links for MAFG-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MAFG-AS1

No disorders were found for MAFG-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MAFG-AS1 Gene

Publications for MAFG-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3 64

Products for MAFG-AS1 Gene

Sources for MAFG-AS1 Gene

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