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Aliases & Descriptions for MADD
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases DENN 1 , 2 , 3 , 5 FLJ35600 2 FLJ36300 2 IG20 2 , 3 KIAA0358 1 , 2 , 3 RAB3GEP 1 , 2
Descriptions Differentially expressed in normal and neoplastic cells 2 , 3 Insulinoma glucagonoma clone 20 3 MAP-kinase activating death domain 2 MAP-kinase activating death domain-containing protein 2 Rab3 GDP/GTP exchange factor 2 , 3 insulinoma-glucagonoma protein 20 2
Search outside databases for aliases for MADD genePrevious GC identifers: GC11P049230 GC11P048168 GC11P047322 GC11P047255
Summaries for MADD (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for MADD : Tumor necrosis factor alpha (TNF-alpha) is a signaling molecule that interacts with one of tworeceptors on cells targeted for apoptosis. The apoptotic signal is transduced inside these cellsby cytoplasmic adaptor proteins. The protein encoded by this gene is a death domain-containingadaptor protein that interacts with the death domain of TNF-alpha receptor 1 to activatemitogen-activated protein kinase (MAPK) and propagate the apoptotic signal. It is membrane-boundand expressed at a higher level in neoplastic cells than in normal cells. Several transcriptvariants encoding different isoforms have been described for this gene. [provided by RefSeq] UniProtKB/Swiss-Prot: MADD_HUMAN, Q8WXG6 Function : Plays a significant role in regulating cell proliferation, survival and death throughalternative mRNA splicing. Isoform 5 shows increased cell proliferation and isoform 2 showsdecreased. Converts GDP-bound inactive form of RAB3A, RAB3C and RAB3D to the GTP-bound activeforms. Component of the TNFRSF1A signaling complex: MADD links TNFRSF1A with MAP kinaseactivation. Plays an important regulatory role in physiological cell death (TNF-alpha-induced,caspase-mediated apoptosis); isoform 1 is susceptible to inducing apoptosis, isoform 5 isresistant and isoform 3 and isoform 4 have no effect
Gene Wiki entry for MADD
Genomic Location for MADD
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the MADD gene Entrez Gene cytogenetic band: 11p11.2 Ensembl cytogenetic band: 11p11.2 HGNC cytogenetic band: 11p11.2 MADD Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 11 GeneLoc Exon Structure
GeneLoc location for GC11P047247:
(about GC identifiers )
Start:
47,247,535 bp from pter
End:
47,314,521 bp from pter
Size:
66,987 bases
Orientation:
plus strand
RefSeq DNA sequence: NC_000011.8 NT_009237.17 Proteins for MADD
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: MADD_HUMAN, Q8WXG6 (See
protein sequence )Recommended Name: MAP kinase-activating death domain protein Size : 1647 amino acids; 183303 Da
Subunit : Interacts with the death domain of TNFRSF1A through its own death domain
Subcellular location : Membrane; Multi-pass membrane protein
Miscellaneous : Overexpression of MADD activates the mitogen-activated protein (MAP) kinaseextracellular signal-regulated kinase (ERK). Expression of the MADD death domain stimulates boththe ERK and c-JUN N-terminal kinase MAP kinases and induces the phosphorylation of cytosolicphospholipase A2
Secondary accessions : O15065 O15293 Q15732 Q15741 Q8IWD7 Q8WXG3 Q8WXG4 Q8WXG5 Q8WZ63Alternative splicing : 7 isoforms : Q8WXG6-1 Q8WXG6-2 Q8WXG6-3 Q8WXG6-4 Q8WXG6-5 Q8WXG6-6 Q8WXG6-7
Post-translational modifications:
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (10 alternative transcripts):
NP_001129415.1 NP_001129416.1 NP_003673.3 NP_569826.2 NP_569827.2 NP_569828.2 NP_569829.2 NP_569830.2 NP_569831.1 NP_569832.2 ENSEMBL proteins: ENSP00000384483 ENSP00000384435 ENSP00000343902 ENSP00000385585 ENSP00000384204 ENSP00000384287 ENSP00000378745 ENSP00000310933 ENSP00000304505 ENSP00000378751 ENSP00000378753 ENSP00000378758 Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 3 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for MADD: Assays for MADD:
Protein
Domains/ Families for MADD(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry Q8WXG6 ProtoNet protein and cluster: Q8WXG6
UniProtKB/Swiss-Prot: MADD_HUMAN, Q8WXG6 Similarity : Belongs to the MADD familySimilarity : Contains 1 dDENN domainSimilarity : Contains 1 death domainSimilarity : Contains 1 DENN domainSimilarity : Contains 1 uDENN domain
Gene Function for MADD
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 10 ): NM_003682 Applied Biosystems Silencer ® siRNAs for MADD Sigma-Aldrich siRNA for MADD Sigma-Aldrich shRNA Panels and shRNA for MADD Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 10 ): NM_001135943                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 10 ): NM_001135943                                  untagged cDNA clones in CMV expression vector (see all 10 ): NM_001135943  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_003682 UniProtKB/Swiss-Prot: MADD_HUMAN, Q8WXG6 Function : Plays a significant role in regulating cell proliferation, survival and death throughalternative mRNA splicing. Isoform 5 shows increased cell proliferation and isoform 2 showsdecreased. Converts GDP-bound inactive form of RAB3A, RAB3C and RAB3D to the GTP-bound activeforms. Component of the TNFRSF1A signaling complex: MADD links TNFRSF1A with MAP kinaseactivation. Plays an important regulatory role in physiological cell death (TNF-alpha-induced,caspase-mediated apoptosis); isoform 1 is susceptible to inducing apoptosis, isoform 5 isresistant and isoform 3 and isoform 4 have no effect
Genatlas biochemistry entry for MADD :Map kinase-activating death domain protein homolog and similar to C elegans AEX3,differentiallyexpressed in normal and neoplastic cell,linkingTNFR1 with MAP kinase activation and arachidonicacid release and provide further insight into the mechanisms by which TNF exerts its pleiotropiceffects
5 MGI mutant phenotypes (inferred from 1 allele ) (MGI details for Madd) :5 Gene Ontology (GO) molecular function terms (links to tree view) :
About this table
Pathways & Interactions for MADD
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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Gene Network CentralTM Interacting Genes and Proteins Network for MADD 5/28 Interacting proteins for MADD (Q8WXG6 1 ENSP00000310933 3 ) via UniProtKB, MINT, and/or STRING (see all 28
)About this table 4 Gene Ontology (GO) biological process terms (links to tree view) :
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Drugs & Compounds for MADD (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for MADD 2 Novoseek chemical compound relationships for MADD gene
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Transcripts for MADD(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
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OriGene ,
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 10 ): NM_003682 Sigma-Aldrich siRNA for MADD Sigma-Aldrich shRNA Panels and shRNA for MADD Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_001135943 NM_001135944 NM_003682 NM_130470 NM_130471 NM_130472 NM_130473 NM_130474 NM_130475 NM_130476
REFSEQ mRNAs for MADD gene (10 alternative transcripts): NM_001135943.1 NM_001135944.1 NM_003682.3 NM_130470.2 NM_130471.2 NM_130472.2 NM_130473.2 NM_130474.2 NM_130475.2 NM_130476.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001135943 NM_001135944 NM_003682 NM_130470 NM_130471 NM_130472 NM_130473 NM_130474 NM_130475 NM_130476
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 10 ): NM_001135943                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 10 ): NM_001135943                                  untagged cDNA clones in CMV expression vector (see all 10 ): NM_001135943  
Additional cDNA sequence: AB002356.1 AF440100.1 AF440101.1 AF440102.1 AF440103.1 AF440434.1 AK292442.1 BC040484.1 U44953.1 U77352.1
20 DOTS entries : DT.95196710 DT.100824108 DT.95196696 DT.95196704 DT.91680541 DT.95196665 DT.75126953 DT.100029601 DT.100824110 DT.100824109 DT.100646688 DT.87015779 DT.120754723 DT.40213898 DT.120754703 DT.120754733 DT.120754744 DT.91894316 DT.97848210 DT.91739600
24/268 AceView cDNA sequences (see all 268
):AW999775 NM_130474 CB164318 AU130871 BM699383 NM_130472 NM_130476 AA768186 BM547742 BQ434951 CA435662 AA731365 AX747807 AA771933 NM_130475 BM708070 AA376927 NM_003682 CD722967 AL041084 BQ216930 BQ640625 BM743699 BM757184
highest scoring ESTs for MADD :AB002356 AA135118 AA181266 AA181397 AA281945 AA282445 AA349852 AA357581 AA365684 AA376927
Unigene Cluster for MADD: MAP-kinase activating death domain Hs.82548 [show with all ESTs ] Unigene Representative Sequence: NM_003682 GeneLoc Exon Structure 5/21 Alternative Splicing Database (ASD) splice patterns (SP) for MADD (see all 21
) ExUns: 1 ^ 2 ^ 3 ^ 4a · 4b · 4c ^ 5 ^ 6 ^ 7a · 7b · 7c · 7d ^ 8a · 8b ^ 9a · 9b ^ 10a · 10b ^ 11 ^ 12 ^ 13 ^ 14 ^ 15 ^ 16 ^ 17a · 17b ^ SP1 :     -   -   -   -   -                 -                         SP2 :             -                 -                         SP3 :     -   -   -   -   -                 -                       -   SP4 :     -   -   -   -   -                 -                         SP5 :   -   -   -   -   -   -                 -                        
ExUns: 18a · 18b ^ 19 ^ 20 ^ 21 ^ 22a · 22b ^ 23a · 23b · 23c · 23d ^ 24 ^ 25 ^ 26 ^ 27a · 27b ^ 28a · 28b ^ 29 ^ 30 ^ 31 ^ 32 ^ 33 ^ 34 ^ 35 ^ 36 ^ SP1 : -                                                     SP2 : -                                                     SP3 : -                         -               -               SP4 : -                         -               -               SP5 : -       -                   -               -              
ExUns: 37 ^ 38a · 38b ^ 39a · 39b ^ 40a · 40b SP1 :     -   -         SP2 :   -   -   -         SP3 :     -   -         SP4 :     -   -         SP5 :     -   -        
About this scheme ECgene alternative splicing isoforms for MADD 12 Ensembl transcripts including schematic representations : ENST00000405573
ENST00000406482
ENST00000342922
ENST00000402799
ENST00000407859
ENST00000402192
ENST00000395336
ENST00000311027
ENST00000349238
ENST00000395342
ENST00000395344
ENST00000395349
Expression for MADD
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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MADD expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for MADD 1 / 2 / 3
5 probe-sets matching MADD gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: ACTGGGCGCCSOURCE GeneReport for Unigene cluster: Hs.82548 Expression variation in blood from EXPOLDB for MADD
UniProtKB/Swiss-Prot: MADD_HUMAN, Q8WXG6 Tissue specificity : Highly expressed in fetal brain and kidney; adult testis, ovary, brain andheart. Isoform 5 is constitutively expressed in all tissues. Isoform 7 is expressed in fetal liverand in several cancer cell lines
Orthologs for MADD
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for MADD gene from 5/12 species (see all 12
)
About this table Species with no ortholog for MADD ENSEMBL Gene Tree for MADD Paralogs for MADD (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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--
SNPs/Variants for MADD (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for MADD (up to first 250kb)
Disorders & Mutations for MADD
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 603584 3 Novoseek disease relationships for MADD gene
About this table Human Genome Epidemiology Navigator: MADD (3 documents)
Medical News for MADD (Possibly Related Articles in
Doctor's Guide )
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Publications for MADD (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/36 PubMed articles for MADD gene (see all 36
): The human DENN gene: genomic organization, alternative splicing, and localization to chromosome 11p11.21-p11.22. (PubMed id 9796103) 1, 2, 3, 4 Chow V.T....Lim D. (1998) MADD, a novel death domain protein that interacts with the type 1 tumor necrosis factor receptor and activates mitogen-activated protein kinase. (PubMed id 9115275) 2, 3, 4 Schievella A.R.... Lin L.-L. (1997) IG20, in contrast to DENN-SV, (MADD splice variants) suppresses tumor cell survival, and enhances their susceptibility to apoptosis and cancer drugs. (PubMed id 14716293) 1, 3, 4 Efimova E.V.... Prabhakar B.S. (2004) Contrasting effects of IG20 and its splice isoforms, MADD and DENN- SV, on tumor necrosis factor alpha-induced apoptosis and activation of caspase-8 and -3. (PubMed id 11577081) 1, 3, 4 Al-Zoubi A.M.... Prabhakar B.S. (2001) Antisense abrogation of DENN expression induces apoptosis of leukemia cells in vitro, causes tumor regression in vivo and alters the transcription of genes involved in apoptosis and the cell cycle. (PubMed id 14735464) 3, 4 Lim K.M.... Chow V.T.K. (2004) Down-regulation of DENN/MADD, a TNF receptor binding protein, correlates with neuronal cell death in Alzheimer's disease brain and hippocampal neurons. (PubMed id 15007167) 3, 4 Del Villar K. and Miller C.A. (2004) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 3, 4 Gerhard D.S....Malek J. (2004) Prediction of the coding sequences of unidentified human genes. VII. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro. (PubMed id 9205841) 3, 4 Nagase T....Ohara O. (1997) DENN, a novel human gene differentially expressed in normal and neoplastic cells. (PubMed id 8988362) 3, 4 Chow V.T.K. and Lee S.S. (1996) IG20, a MADD splice variant, increases cell susceptibility to gamma-irradiation and induces soluble mediators that suppress tumor cell growth. (PubMed id 14695193) 1, 3 Efimova E....Prabhakar B.S. (2003)
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Genome Databases showing MADD
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing MADD
(According to HUGE )
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Specialized Databases showing MADD (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for MADD (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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Products for MADD:
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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009