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MAB21L2 Gene

protein-coding   GIFtS: 47

GC04P151722
mab-21-like 2 (C. elegans)
(Previous name: mab-21 (C. elegans)-like 2 )
Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database
Services    
(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc , and/or 7Ensembl, 8miRBase)
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Aliases
FLJ31103 2
Descriptions
mab-21 (C. elegans)-like 2 1
mab-21-like 2 (C. elegans) 2
mab-21-like protein 2 2
External Ids
HGNC: 67581
Entrez Gene: 105862
UniProtKB: Q9Y5863
Ensembl: ENSG000001815417
Search outside databases for aliases for MAB21L2 gene

Previous GC identifers: GC04P152311 GC04P151890 GC04P152080 GC04P151860

(According to Entrez Gene, Wikipedia's Gene Wiki,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

EntrezGene summary for MAB21L2:
This gene is similar to the C. elegans MAB-21 cell fate-determining gene, a downstream target of
transforming growth factor-beta signaling. It is thought that this gene may be involved in neural
development. The protein encoded by this gene is primarily nuclear, although some cytoplasmic
localization has been observed. [provided by RefSeq]

UniProtKB/Swiss-Prot: MB212_HUMAN, Q9Y586
Function: Required for several aspects of embryonic development including normal development of the
eye (By similarity)

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to UCSC and Ensembl, Transcription factor binding sites according to SABiosciences)
About This Section

Genomic View:
UCSC Golden Path with GeneCards custom track

 Transcription factor binding sites upstream to the MAB21L2 gene  

Entrez Gene cytogenetic band: 4q31   Ensembl cytogenetic band:  4q31.3   HGNC cytogenetic band: 4q31

MAB21L2 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)

GeneLoc gene densities for chromosome 4         GeneLoc Exon Structure

GeneLoc location for GC04P151722:     (about GC identifiers)

Start:
151,722,753 bp from pter
End:
151,725,295 bp from pter
Size:
2,543 bases
Orientation:
plus strand
RefSeq DNA sequence:
NC_000004.10  NT_016354.18  
(According to 1UniProtKB, and/or Ensembl, Phosphorylation sites according to 2Phosphosite, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Enzo Life Sciences, Abnova, OriGene and/or, Abcam,
Biochemical Assays by Invitrogen, Millipore, R&D Systems, Cell Signaling Technology, and/or Enzo Life Sciences, Ontologies according to Gene Ontology Consortium 01 Apr 2009 and Entrez Gene, Antibodies by Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Cell Signaling Technology, Abcam, Abnova, and/or Novus Biologicals)
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UniProtKB/Swiss-Prot: MB212_HUMAN, Q9Y586 (See protein sequence)
Recommended Name: Protein mab-21-like 2  
Size: 359 amino acids; 40923 Da
Subcellular location: Nucleus (By similarity)
Secondary accessions: B3KP37 Q9HBA7

Post-translational modifications:

  • View phosphorylation sites using PhosphoSite2


  • REFSEQ proteins: NP_006430.1  

    ENSEMBL proteins: 
    ENSP00000324701 


    Human Recombinant Proteins 
    Browse Drug Discovery Central at Invitrogen for human recombinant proteins
    Browse Purified and Recombinant Proteins at Millipore
    Browse Human Recombinant Proteins at Sigma-Aldrich  
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Browse Abcam for Recombinant Proteins
    Human Recombinant Proteins from Abnova (MAB21L2)
                    Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 

    1 Gene Ontology (GO) cellular component term (links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005634 nucleus IEA--
    About this table

    Antibodies for MAB21L2: 
    Browse Antibodies Central at Invitrogen
    Browse Millipore's Extensive Line of Mono- and Polyclonal Antibodies
    Browse Antibodies at Sigma-Aldrich
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    Search for antibodies at Abcam and the World's Antibody Gateway (free search engine of over 150 antibody companies)
    Browse Abnova for Monoclonal and Polyclonal Antibodies
    Search Novus for antibodies for MAB21L2

    Assays for MAB21L2: 
    Browse Invitrogen for biochemical assays
    Browse Kits and Assays available from Millipore
    Browse R&D Systems for biochemical assays
    Browse biochemical assays available from Enzo Life Sciences

    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    1 InterPro domain/family:
     IPR004962 Mab-21


       GeneDecks  MAB21L2 for the domains selected above  
    About GeneDecksing

    Graphical View of Domain Structure for InterPro Entry Q9Y586

    ProtoNet protein and cluster: Q9Y586

    1 Blocks protein family: IPB000772 Ricin B lectin domain

    UniProtKB/Swiss-Prot: MB212_HUMAN, Q9Y586
    Similarity: Belongs to the mab-21 family

    (According to MGI Jun 06 2009, UniProtKB, IUBMB,and/or Genatlas,
    shRNA from OriGene, Sigma-Aldrich, RNAi from Sigma-Aldrich,
    RNAi Products, Clones, and Q-PCR Products from Invitrogen, Millipore, OriGene, and/or Abnova, siRNAs from Applied Biosystems, SYBR primers from OriGene, Cell-based Assays from Millipore, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
    About This Section

    Inhib.
    RNA:
    Invitrogen RNAi Products for gene knock-down (MAB21L2)
    Browse for Gene Knock-down Tools from Millipore
    Browse Abnova for Chimera RNAi Products
                  OriGene 29mer shRNA kit in GFP-retroviral vector: NM_006439

                  Applied Biosystems Silencer® siRNAs for MAB21L2

                  Sigma-Aldrich siRNA for MAB21L2  
                         Sigma-Aldrich shRNA for MAB21L2  
                         Explore Sigma-Aldrich super-pooled esiRNAs  

    Clones:Invitrogen Clones for MAB21L2
    Browse Clones for the Expression of Recombinant Proteins Available from Millipore
                  OriGene GFP tagged cDNA clone in CMV expression vector: NM_006439
                                     Myc/DDK tagged cDNA clone in CMV expression vector: NM_006439
                                     untagged cDNA clone in CMV expression vector: NM_006439 

    Primers: Browse Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers
                  OriGene genome-wide validated SYBR primer pairs: NM_006439

    UniProtKB/Swiss-Prot: MB212_HUMAN, Q9Y586
    Function: Required for several aspects of embryonic development including normal development of the
    eye (By similarity)

    Genatlas biochemistry entry for MAB21L2:
    mab-21 (C elegans)-like 2,member of a family of genes,involved in vertebrate neural development

    6 MGI mutant phenotypes (inferred from 1 allele(MGI details for Mab21l2):

    embryogenesisgrowth/sizelethality-prenatal/perinatalpigmentation
    vision/eye

    (Pathways according to Invitrogen (maps by GeneGo), Millipore, Cell Signaling Technology, Sigma-Aldrich, KEGG and/or UniProtKB,
    Sets of similar genes according to GeneDecks, Proteins Network according to SABiosciences, Interactions according to 1UniProtKB, 2MINT, and/or 3STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
    About This Section


      --

    5 Gene Ontology (GO) biological process terms (links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0007275 multicellular organismal development IEA--
    GO:0007399 nervous system development TAS10556287
    GO:0008284 positive regulation of cell proliferation IEA--
    GO:0010172 embryonic body morphogenesis IEA--
    GO:0043010 camera-type eye development IEA--
    About this table
    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, Sigma-Aldrich, Tocris Bioscience, and/or Novoseek and Drugs according to Enzo Life Sciences and/or PharmGKB)
    About This Section

    Browse drugs & compounds from Enzo Life Sciences
    Browse Small Molecules at Sigma-Aldrich

    Browse Tocris compounds for MAB21L2

    (GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 219 Homo sapiens; Jun 2 2009) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView,
    non coding RNAs according to RNAdb,
    ESTs according to GeneTide,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from Invitrogen, Millipore, and/or Abnova,
    siRNAs from Applied Biosystems, Sigma-Aldrich,
    shRNA from Sigma-Aldrich, OriGene,
    Tagged/untagged cDNA clones from OriGene,
    Expression Assays from Applied Biosystems)
    About This Section

    Inhib.
    RNA:
    Invitrogen RNAi Products for gene knock-down (MAB21L2)
    Browse for Gene Knock-down Tools from Millipore
    Browse Abnova for Chimera RNAi Products
                  OriGene 29mer shRNA kit in GFP-retroviral vector: NM_006439

                  Sigma-Aldrich siRNA for MAB21L2  
                         Sigma-Aldrich shRNA for MAB21L2  
                         Explore Sigma-Aldrich super-pooled esiRNAs  

    Applied Biosystems Silencer® siRNAs: 

    NM_006439  

    REFSEQ mRNAs for MAB21L2 gene: 

    NM_006439.4   

    Applied Biosystems TaqMan ® Gene Expression Assays: 

    NM_006439  

                  OriGene GFP tagged cDNA clone in CMV expression vector: NM_006439
                                     Myc/DDK tagged cDNA clone in CMV expression vector: NM_006439
                                     untagged cDNA clone in CMV expression vector: NM_006439 

    Additional cDNA sequence: 

    AF262032.1 AF370007.1 AK055665.1 BC009983.2 CR620783.1 

    3 DOTS entries:

    DT.40225367  DT.100646301  DT.95350475 

    24/37 AceView cDNA sequences (see all 37 ):

    BC009983 CR620783 NM_006439 AL515812 AL702293 BM728642 BF314563 BI195867 
    AL522676 CB857031 AF262032 BX493567 AA679158 BX283081 AL515813 AK055665 
    BX645470 BX348661 AF370007 BE260646 BF316056 CA395355 BI481050 BP346235 

    highest scoring ESTs for MAB21L2:

    AA365382 AA679158 AF262032 AF370007 AK055665 AL515812 AL522675 AL523558 AL712791 AW884958 

    Unigene Cluster for MAB21L2:

    Mab-21-like 2 (C. elegans)
    Hs.584852  [show with all ESTs]
    Unigene Representative Sequence: NM_006439


    GeneLoc Exon Structure

    1 Ensembl transcript including schematic representation:
    ENST00000317605  
    (Experimental results according to 1GeneNote and GNF BioGPS,
    probe sets-to-genes annotations according to 2GeneAnnot , 3GeneTide , Sets of similar genes according to GeneDecks, Electronic Northern calculations according to data from UniGene (Build 219 Homo sapiens), SAGE tags according to CGAP, plus additional links to SOURCE, and/or GNF BioGPS, and/or EXPOLDB, and/or UniProtKB,
    Expression Assays from Applied Biosystems )
    About This Section

    MAB21L2 expression in normal and diseased human tissues

     Applied Biosystems TaqMan ® Gene Expression Assays for MAB21L2

    1 / 2 / 3

    4 probe-sets matching MAB21L2 gene


    Affymetrix
    probe-set
    Array  GeneAnnot data GeneNote data GeneTide data
    # genes Sensitivity Specificity Correlation Length Gb_Accession Consensus Uniqueness Score Rank

    210303_at2, 3 U133-A 1 1.00 1.00 -- -- AF262032 0.80 1.00 0.91 1

    210302_s_at2, 3 U133-A 1 1.00 1.00 -- -- AF262032 0.80 1.00 0.91 1

    210303_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --

    210302_s_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --
    About this table
    Data from (Publications) and GNF BioGPS
        About these images
    About these images

    CGAP SAGE TAG: AAGACGCTGC

    SOURCE GeneReport for Unigene cluster: Hs.584852
    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD and/or 5MGI Jun 06 2009, with possible further links to Flybase and/or WormBase, Gene Trees according to Ensembl)
    About This Section


    Orthologs for MAB21L2 gene from 5/8 species (see all 8 )
    Organism Gene Locus Description Human
    Similarity
    NCBI accessions
    dog
    (Canis familiaris)
    MAB21L21   -- mab-21-like 2 (C. elegans) 95.26(n)
    99.72(a)
    482643  XM_539761.2  XP_539761.1 
    chimpanzee
    (Pan troglodytes)
    MAB21L21   -- mab-21-like 2 (C. elegans) 99.91(n)
    100(a)
    740842  XM_001151747.1  XP_001151747.1 
    cow
    (Bos taurus)
    MAB21L21   -- mab-21-like 2 (C. elegans) 94.89(n)
    99.72(a)
    539225  XM_585738.3  XP_585738.1 
    rat
    (Rattus norvegicus)
    Mab21l21   -- mab-21-like 2 (C. elegans) 92.29(n)
    99.72(a)
    680102  XM_001055031.1  XP_001055031.1 
    mouse
    (Mus musculus)
    Mab21l21, 5 35
    mab-21-like 2 (C. elegans)1, 5 92.39(n)1
    99.72(a)1
    239371  NM_011839.31  NP_035969.21 
     AA2451835  AF1264275  (see all 13)
    About this table        Species with no ortholog for MAB21L2

    ENSEMBL Gene Tree for MAB21L2
    (Paralogs according to 1HomoloGene
    and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
    About This Section

    Paralogs for MAB21L2 gene
    C1orf1612  MAB21L12  

    (According to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, and UniProtKB, Linkage Disequilibrium by HapMap, Genotyping Reagents from Applied Biosystems)
    About This Section

      --
    (in which this Gene is Involved, According to OMIM, UniProtKB, PharmGKB, Genatlas, GeneTests, Blood group antigen gene mutations by BGMUT, HGMD, GAD, HuGE Navigator, BCGD, and/or TGDB.)
    About This Section

    OMIM: 604357

    (Possibly Related Articles in Doctor's Guide)
    About This Section

      --

    (in PubMed. Associations of this gene to articles via 1Novoseek, 2HGNC, 3Entrez Gene, 4UniProtKB/Swiss-Prot, 5UniProtKB/TrEMBL, 6GAD, and/or 7PharmGKB)
    About This Section

    6 PubMed articles for MAB21L2 gene:
    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section

     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)
    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, and/or H-InvDB)
    About This Section

    Entrez Gene: 10586 HGNC: 6758 AceView: MAB21L2 Ensembl:ENSG00000181541 euGenes: HUgn10586
    ECgene: MAB21L2 H-InvDB: MAB21L2
    (According to HUGE)
    About This Section

      --
    (According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section

    NameDescription
    ATLAS Chromosomes in Cancer entry for MAB21L2 Genetics and Cytogenetics in Oncology and Haematology
    (Available from WIS Yeda, Salk, Tufts)
    About This Section

      --
    (Reagents available from Applied Biosystems, Antibodies and assays by Cell Signaling Technology, Abcam, Novus Biologicals,
    Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich,
    Enzo Life Sciences, and/or Tocris Bioscience)
    About This Section



    Products for MAB21L2:
     TaqMan ® Gene Expression Assays
     TaqMan ® Genotyping Assays
      Free SNP selection tool



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