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Aliases & Descriptions for M6PR
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| CD-MPR 2, 3 | | FLJ32994 2 | | MPR46 2, 3 | | MPRD 3 | | SMPR 2 |
| | | Descriptions |
|---|
| 46 kDa mannose 6-phosphate receptor 3 | | 46-kDa mannose 6-phosphate receptor 2 | | CD Man-6-P receptor 3 | | MPR 46 3 | | Mr 46,000 Man6PR 2 | | cation-dependent mannose-6-phosphate receptor 2 | | mannose-6-phosphate receptor (cation dependent) 2 |
|
| | Search outside databases for aliases for M6PR genePrevious GC identifers: GC12M008801 GC12M009241 GC12M008993 |
Summaries for M6PR(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for M6PR: The protein encoded by this gene is a receptor for mannose-6-phosphate groups on lysosomal enzymes. The receptor forms a homodimer or homotetramer for intracellular targeting of lysosomal enzymes and export of newly synthesized lysosomal enzymes into the cell secretions. The receptor is an integral membrane protein which localizes to the trans-Golgi reticulum, endosomes, and the plasma membrane. [provided by RefSeq] UniProtKB/Swiss-Prot: MPRD_HUMAN, P20645Function: Transport of phosphorylated lysosomal enzymes from the Golgi complex and the cell surface to lysosomes. Lysosomal enzymes bearing phosphomannosyl residues bind specifically to mannose-6-phosphate receptors in the Golgi apparatus and the resulting receptor-ligand complex is transported to an acidic prelyosomal compartment where the low pH mediates the dissociation of the complex |
Genomic Location for M6PR
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the M6PR gene 
Entrez Gene cytogenetic band: 12p13 Ensembl cytogenetic band: 12p13.31 HGNC chromosome: 12M6PR Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 12 GeneLoc Exon Structure GeneLoc location for GC12M008984:
(about GC identifiers)
Start:
|
8,984,231 bp from pter |
End:
|
8,993,519 bp from pter |
Size:
|
9,289 bases |
Orientation:
|
minus strand |
RefSeq DNA sequence:- NC_000012.10 NT_009714.16
| Proteins for M6PR
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: MPRD_HUMAN, P20645 (See
protein sequence)Recommended Name: Cation-dependent mannose-6-phosphate receptor precursor Size: 277 amino acids; 30993 Da
Subunit: Homodimer. Binds GGA1, GGA2 and GGA3
Subcellular location: Lysosome membrane; Single-pass type I membrane protein
Miscellaneous: This receptor has optimal binding in the presence of divalent cationsPost-translational modifications:
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_002346.1
ENSEMBL proteins: ENSP00000000412
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
5 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for M6PR: Assays for M6PR: | Protein
Domains/ Families for M6PR(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P20645
ProtoNet protein and cluster: P20645 1 Blocks protein family: IPB000296 Cation-dependent mannose-6-phosphate receptor signature
UniProtKB/Swiss-Prot: MPRD_HUMAN, P20645Domain: The extracellular domain is homologous to the repeating units (of approximately 147 AA) of the cation-independent mannose 6-phosphate receptor | Gene Function for M6PR
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_002355
Applied Biosystems Silencer® siRNAs for M6PR
Sigma-Aldrich siRNA for M6PR  Sigma-Aldrich shRNA for M6PR  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_002355                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_002355                                  untagged cDNA clones in CMV expression vector (see all 2): NM_002355 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_002355
UniProtKB/Swiss-Prot: MPRD_HUMAN, P20645Function: Transport of phosphorylated lysosomal enzymes from the Golgi complex and the cell surface to lysosomes. Lysosomal enzymes bearing phosphomannosyl residues bind specifically to mannose-6-phosphate receptors in the Golgi apparatus and the resulting receptor-ligand complex is transported to an acidic prelyosomal compartment where the low pH mediates the dissociation of the complexGenatlas biochemistry entry for M6PR:mannose 6-phosphate receptor,cation dependent ,expressed on the cell surface of Golgi and late endosome membrane,targetting phosphorylated enzymes to lysosomes10 MGI mutant phenotypes (inferred from 2 alleles ) (MGI details for M6pr):
4 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for M6PR
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
Gene Network CentralTM Interacting Genes and Proteins Network for M6PR 
5/38 Interacting proteins for M6PR (ENSP000000004123 P206452) via UniProtKB, MINT, and/or STRING (see all 38
)About this table
4 Gene Ontology (GO) biological process terms (links to tree view): About this table
|
Drugs & Compounds for M6PR(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for M6PR 10/16 Novoseek chemical compound relationships for M6PR gene (see all 16
)
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| mannose 6-phosphate |
98.98 |
551 |
12535273 (7), 9152028 (5), 8163521 (5), 2170115 (4) (see all 99) |
| 3-(2,4-dinitroanilino)-3'-amino-n-methyldipropylamine |
70.58 |
1 |
9278305 (1) |
| mannose |
66.00 |
14 |
11801606 (1), 14557264 (1), 18838694 (1), 8435067 (1) (see all 13) |
| ricin |
50.20 |
10 |
12154075 (3), 11102518 (1), 17389686 (1), 11452006 (1) |
| heparan sulfate |
45.97 |
2 |
16280358 (2) |
| monensin |
30.99 |
1 |
11444150 (1) |
| percoll |
27.94 |
3 |
16438964 (1), 10896932 (1) |
| wortmannin |
24.22 |
1 |
8735606 (1) |
| asparagine |
18.55 |
3 |
1847926 (2) |
| glycogen |
15.24 |
4 |
14567965 (1), 2268275 (1), 9736785 (1), 9322088 (1) |
About this table
|
Transcripts for M6PR(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_002355
Sigma-Aldrich siRNA for M6PR  Sigma-Aldrich shRNA for M6PR  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_002355 REFSEQ mRNAs for M6PR gene: NM_002355.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_002355               OriGene GFP tagged cDNA clone in CMV expression vector: NM_002355                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_002355                                  untagged cDNA clones in CMV expression vector (see all 2): NM_002355  Additional cDNA sequence: AK222792.1 AK291143.1 AK312689.1 BC017111.1 BC024206.1 CR457412.1 CR616312.1 M16985.1 24/31 DOTS entries (see all 31
): DT.92461710 DT.99952542 DT.95140600 DT.91823927 DT.121125363 DT.95140538 DT.121125259 DT.100798763 DT.121125309 DT.92461707 DT.101959691 DT.100798750 DT.40229521 DT.121125323 DT.75194392 DT.100798771 DT.99955155 DT.121125285 DT.121125337 DT.92059916 DT.92390918 DT.95140531 DT.95140574 DT.100798747 24/724 AceView cDNA sequences (see all 724
):F02749 BQ711958 BU623427 BQ063972 AW166940 BU956843 BU180356 CD365016 T99739 BM713289 BU528095 AU130397 AA593608 BF725875 BQ877840 CF527783 N48193 BU197162 BM559376 AW239331 BC024206 BQ214599 BI255821 BE047627
highest scoring ESTs for M6PR:AA034480 AA176278 AA206571 AA218618 AA223457 AA223856 AA368680 AA370358 AA370482 AA370763 Unigene Cluster for M6PR: Mannose-6-phosphate receptor (cation dependent) Hs.134084 [show with all ESTs]Unigene Representative Sequence: BC024206
GeneLoc Exon Structure
5/9 Alternative Splicing Database (ASD) splice patterns (SP) for M6PR (see all 9
)
| ExUns: | 1a | · | 1b | · | 1c | ^ | 2 | ^ | 3 | ^ | 4a | · | 4b | · | 4c | · | 4d | ^ | 5a | · | 5b | · | 5c | · | 5d | ^ | 6a | · | 6b | ^ | 7a | · | 7b | · | 7c | ^ | 8a | · | 8b | ^ | 9a | · | 9b | |
| SP1: | |   | |   | |   | - |   | - |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |
| SP2: | |   | |   | |   | - |   | - |   | - |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | - |   | - |   | |   | |   | |   | - |   | - |   | |   | |   | - |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |
| SP4: | |   | |   | |   | |   | |   | |   | |   | - |   | - |   | - |   | - |   | - |   | - |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |
| SP5: | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for M6PR
1 Ensembl transcript including schematic representation: ENST00000000412
|
Expression for M6PR
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| M6PR expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for M6PR
1 / 2 / 3 5 probe-sets matching M6PR gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: GCTCCACTGG
SOURCE GeneReport for Unigene cluster: Hs.134084
|
Orthologs for M6PR
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for M6PR gene from 5/9 species (see all 9
)
About this table Species with no ortholog for M6PR
ENSEMBL Gene Tree for M6PR | Paralogs for M6PR(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Pseudogenes
- 1 related pseudogene
|
SNPs/Variants for M6PR(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for M6PR (up to first 250kb)
|
Disorders & Mutations for M6PR
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 154540
10/15 Novoseek disease relationships for M6PR gene (see all 15
)
About this table
Genetic Association Database: M6PR Human Genome Epidemiology Navigator: M6PR (3 documents)
|
Medical News for M6PR(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for M6PR (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/267 PubMed articles for M6PR gene (see all 267
):- Isolation and analysis of the human 46-kDa mannose 6-phosphate receptor gene. (PubMed id 1849818)1, 3, 4 Klier H.J.... Pohlmann R. (1991)
- Sorting of mannose 6-phosphate receptors mediated by the GGAs. (PubMed id 11387475)1, 3, 4 Puertollano R....Bonifacino J.S. (2001)
- Putative association of polymorphism in the mannose 6-phosphate receptor gene with major depression and Alzheimer's disease. (PubMed id 15167696)1, 3, 6 Kolsch H....Heun R. (2004)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)3, 4 Gerhard D.S....Malek J. (2004)
- Interaction of the cation-dependent mannose 6-phosphate receptor with GGA proteins. (PubMed id 11886874)3, 4 Doray B.... Kornfeld S. (2002)
- Cloning of a cDNA encoding the human cation-dependent mannose 6- phosphate-specific receptor. (PubMed id 2441386)3, 4 Pohlmann R.... von Figura K. (1987)
- The overexpressed human 46-kDa mannose 6-phosphate receptor mediates endocytosis and sorting of beta-glucuronidase. (PubMed id 2172972)1, 3 Watanabe H....Sly W.S. (1990)
- Requirement of the Human GARP Complex for Mannose 6-phosphate-receptor-dependent Sorting of Cathepsin D to Lysosomes. (PubMed id 18367545)1, 3 Perez-Victoria F.J....Bonifacino J.S. (2008)
- SNX1 defines an early endosomal recycling exit for sortilin and mannose 6-phosphate receptors. (PubMed id 18088323)1, 3 Mari M....Geuze H.J. (2008)
- Characterization of the endosomal sorting signal of the cation-dependent mannose 6-phosphate receptor. (PubMed id 12697764)1, 3 Nair P....Rohrer J. (2003)
|
Search for M6PR
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing M6PR
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing M6PR
(According to HUGE)
About This Section
| -- |
Specialized Databases showing M6PR(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for M6PR(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for M6PR:

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Incremental update: 13 Oct 2009
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