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Aliases for LOC647150 Gene

Subcategory (RNA class) for LOC647150 Gene

lncRNA

Aliases for LOC647150 Gene

  • ATP Binding Cassette Subfamily E Member 1 Pseudogene 3
  • AL513175.1 5

External Ids for LOC647150 Gene

ORGUL Members for LOC647150 Gene

Previous GeneCards Identifiers for LOC647150 Gene

  • GC01M190481
  • GC01M192216

Summaries for LOC647150 Gene

GeneCards Summary for LOC647150 Gene

LOC647150 (ATP Binding Cassette Subfamily E Member 1 Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for LOC647150 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC647150 Gene

Genomics for LOC647150 Gene

Regulatory Elements for LOC647150 Gene

Enhancers for LOC647150 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H192580 1.4 FANTOM5 ENCODE dbSUPER 13.1 -333.1 -333130 0 TBL1XR1 RB1 BMI1 RAD21 ZNF207 ATF7 IKZF2 ZNF654 CEBPZ SMAD5 RGS1 LOC647150 TROVE2 CDC73 RGS2 GC01P192596
GH01H192967 0.7 ENCODE 12.4 -720.6 -720636 1 PKNOX1 TAL1 JUN CEBPG ZNF644 ZNF507 FOXK2 IKZF1 CEBPA HNF4G LOC647150 TROVE2 GC01P192950 ZNF101P2
GH01H192247 0.3 FANTOM5 0.7 +0.1 113 0 RGS18 LOC647150 LOC105371662
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC647150 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC647150 Gene

Chromosome:
1
Start:
192,246,708 bp from pter
End:
192,247,495 bp from pter
Size:
788 bases
Orientation:
Minus strand

Genomic View for LOC647150 Gene

Genes around LOC647150 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC647150 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC647150 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC647150 Gene

Proteins for LOC647150 Gene

Post-translational modifications for LOC647150 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC647150 Gene

Domains & Families for LOC647150 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC647150 Gene

Function for LOC647150 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC647150 Gene

Localization for LOC647150 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC647150 Gene

Pathways & Interactions for LOC647150 Gene

SuperPathways for LOC647150 Gene

No Data Available

Interacting Proteins for LOC647150 Gene

Gene Ontology (GO) - Biological Process for LOC647150 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC647150 Gene

Drugs & Compounds for LOC647150 Gene

No Compound Related Data Available

Transcripts for LOC647150 Gene

mRNA/cDNA for LOC647150 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC647150 Gene

No ASD Table

Relevant External Links for LOC647150 Gene

GeneLoc Exon Structure for
LOC647150

Expression for LOC647150 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC647150 Gene

genes like me logo Genes that share expression patterns with LOC647150: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC647150 Gene

Orthologs for LOC647150 Gene

Evolution for LOC647150 Gene

ENSEMBL:
Gene Tree for LOC647150 (if available)
TreeFam:
Gene Tree for LOC647150 (if available)

No data available for Orthologs for LOC647150 Gene

Paralogs for LOC647150 Gene

No data available for Paralogs for LOC647150 Gene

Variants for LOC647150 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC647150 Gene

Disorders for LOC647150 Gene

No disorders were found for LOC647150 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC647150 Gene

Publications for LOC647150 Gene

No publications were found for LOC647150 Gene.

Products for LOC647150 Gene

Sources for LOC647150 Gene

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