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Aliases for LOC646058 Gene

Aliases for LOC646058 Gene

  • Histone PARylation Factor 1 Pseudogene 3
  • AC122713.1 5

External Ids for LOC646058 Gene

Previous GeneCards Identifiers for LOC646058 Gene

  • GC05M179447
  • GC05M179512

Summaries for LOC646058 Gene

GeneCards Summary for LOC646058 Gene

LOC646058 (Histone PARylation Factor 1 Pseudogene) is a Pseudogene.

Additional gene information for LOC646058 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC646058 Gene

Genomics for LOC646058 Gene

Regulatory Elements for LOC646058 Gene

Enhancers for LOC646058 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05H179619 1.7 Ensembl ENCODE dbSUPER 13.1 +464.8 464783 6 MLX FEZF1 DMAP1 YY1 SLC30A9 ZNF143 SP3 ZFP41 ZNF610 ZNF585B ZNF879 MRNIP HNRNPH1 MAML1 ZNF354C ZFP2 GRM6 LOC100996419 ENSG00000254035 CLK4
GH05H179817 1.4 ENCODE dbSUPER 13.1 +266.5 266496 6 MLX ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 SP3 MEF2D SSRP1 MAML1 MRNIP HNRNPH1 ZNF354C ZNF879 CNOT6 TBC1D9B RUFY1 LOC100502572 LOC100289470
GH05H180493 1.1 ENCODE 13.1 -408.3 -408312 4 HDGF PKNOX1 FOXA2 ARNT ARID4B SIN3A YBX1 ZNF2 YY1 ZNF143 HNRNPH1 MAML1 MRNIP ENSG00000233937 TRIM52 ZFP62 RUFY1 RACK1 LOC100420514 OR2AI1P
GH05H180351 1.1 ENCODE dbSUPER 13.1 -265.9 -265944 2 PKNOX1 KLF17 BMI1 GLIS2 SMARCA5 SP3 NFYC ZEB2 ZNF645 NR2F2 LOC100420514 OR2AI1P LOC100419853 LOC646227 OR2V2 ENSG00000250674 LOC100128762 LOC100289470 LOC100502572 ENSG00000253652
GH05H179906 0.9 ENCODE 13.1 +179.4 179399 2 ARNT ARID4B SIN3A ZNF2 ZNF121 GLIS2 ELK1 ZNF143 MXD4 PPARG TBC1D9B LOC100502572 LOC100289470 ENSG00000253652 ENSG00000250674 OR2AI1P LOC100420514 LOC646058 GC05M179870
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC646058 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC646058 Gene

Chromosome:
5
Start:
180,085,607 bp from pter
End:
180,087,055 bp from pter
Size:
1,449 bases
Orientation:
Minus strand

Genomic View for LOC646058 Gene

Genes around LOC646058 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC646058 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC646058 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC646058 Gene

Proteins for LOC646058 Gene

Post-translational modifications for LOC646058 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC646058 Gene

Domains & Families for LOC646058 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC646058 Gene

Function for LOC646058 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC646058 Gene

Localization for LOC646058 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC646058 Gene

Pathways & Interactions for LOC646058 Gene

SuperPathways for LOC646058 Gene

No Data Available

Interacting Proteins for LOC646058 Gene

Gene Ontology (GO) - Biological Process for LOC646058 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC646058 Gene

Drugs & Compounds for LOC646058 Gene

No Compound Related Data Available

Transcripts for LOC646058 Gene

mRNA/cDNA for LOC646058 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC646058 Gene

No ASD Table

Relevant External Links for LOC646058 Gene

GeneLoc Exon Structure for
LOC646058

Expression for LOC646058 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC646058 Gene

mRNA differential expression in normal tissues according to GTEx for LOC646058 Gene

This gene is overexpressed in Brain - Cerebellum (x21.2) and Brain - Cerebellar Hemisphere (x21.0).
genes like me logo Genes that share expression patterns with LOC646058: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC646058 Gene

Orthologs for LOC646058 Gene

Evolution for LOC646058 Gene

ENSEMBL:
Gene Tree for LOC646058 (if available)
TreeFam:
Gene Tree for LOC646058 (if available)

No data available for Orthologs for LOC646058 Gene

Paralogs for LOC646058 Gene

No data available for Paralogs for LOC646058 Gene

Variants for LOC646058 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC646058 Gene

Disorders for LOC646058 Gene

No disorders were found for LOC646058 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC646058 Gene

Publications for LOC646058 Gene

No publications were found for LOC646058 Gene.

Products for LOC646058 Gene

Sources for LOC646058 Gene

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