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Aliases for LOC645513 Gene

Aliases for LOC645513 Gene

  • Septin 7 Pseudogene 3
  • AC093752.1 5

External Ids for LOC645513 Gene

Previous GeneCards Identifiers for LOC645513 Gene

  • GC04P120584
  • GC04P120366
  • GC04P116135

Summaries for LOC645513 Gene

GeneCards Summary for LOC645513 Gene

LOC645513 (Septin 7 Pseudogene) is a Pseudogene.

Additional gene information for LOC645513 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC645513 Gene

Genomics for LOC645513 Gene

Regulatory Elements for LOC645513 Gene

Enhancers for LOC645513 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04H119524 1.1 Ensembl ENCODE 56.8 +71.1 71095 3.3 ELF3 FOXA2 RARA FOS CREM MIXL1 JUNB PPARG KAT8 NFIL3 LOC645513 KLHL2P1 GC04P119579 ENSG00000250950
GH04H119206 2 FANTOM5 Ensembl ENCODE dbSUPER 30.9 -243.8 -243772 8.1 HDGF PKNOX1 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 FOS LOC645513 USP53 FABP2 METTL14 LOC729218 KLHL2P1 MRPL42P1
GH04H119453 1.1 ENCODE 55.2 +0.3 272 2.1 HDGF PKNOX1 MLX ARNT ZFP64 ARID4B SIN3A DMAP1 ZBTB7B YY1 LOC645513 SYNPO2 PDE5A ENSG00000260091 KLHL2P1 ENSG00000250950
GH04H119298 1.1 ENCODE 50.2 -154.8 -154838 3.7 PKNOX1 FOXA2 MLX ZFP64 ARID4B SIN3A DMAP1 YY1 SLC30A9 ZNF143 LOC645513 FABP2 USP53 KLHL2P1 PIR34278 GC04P119302 LOC101929762
GH04H119370 0.9 Ensembl ENCODE 49.6 -83.9 -83905 1 GATAD2A SP3 SAP130 CEBPG ZNF398 NFIC ZNF366 IKZF1 PATZ1 PRDM10 LOC645513 FABP2 KLHL2P1 RNU4-33P PIRC19
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC645513 on UCSC Golden Path with GeneCards custom track

Promoters for LOC645513 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000172496 217 2401 HDGF PKNOX1 MLX ARNT ZFP64 ARID4B SIN3A DMAP1 ZBTB7B YY1

Genomic Locations for LOC645513 Gene

Genomic Locations for LOC645513 Gene
chr4:119,454,783-119,552,025
(GRCh38/hg38)
Size:
97,243 bases
Orientation:
Plus strand
chr4:120,375,938-120,473,180
(GRCh37/hg19)

Genomic View for LOC645513 Gene

Genes around LOC645513 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC645513 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC645513 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC645513 Gene

Proteins for LOC645513 Gene

Post-translational modifications for LOC645513 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC645513 Gene

Domains & Families for LOC645513 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC645513 Gene

Function for LOC645513 Gene

Phenotypes From GWAS Catalog for LOC645513 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC645513 Gene

Localization for LOC645513 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC645513 Gene

Pathways & Interactions for LOC645513 Gene

SuperPathways for LOC645513 Gene

No Data Available

Interacting Proteins for LOC645513 Gene

Gene Ontology (GO) - Biological Process for LOC645513 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC645513 Gene

Drugs & Compounds for LOC645513 Gene

No Compound Related Data Available

Transcripts for LOC645513 Gene

mRNA/cDNA for LOC645513 Gene

(5) Additional mRNA sequences :
(13) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for LOC645513 Gene

Uncharacterized LOC645513:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for LOC645513 Gene

No ASD Table

Relevant External Links for LOC645513 Gene

GeneLoc Exon Structure for
LOC645513

Expression for LOC645513 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC645513 Gene

SOURCE GeneReport for Unigene cluster for LOC645513 Gene:

Hs.677546
genes like me logo Genes that share expression patterns with LOC645513: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC645513 Gene

Orthologs for LOC645513 Gene

Evolution for LOC645513 Gene

ENSEMBL:
Gene Tree for LOC645513 (if available)
TreeFam:
Gene Tree for LOC645513 (if available)

No data available for Orthologs for LOC645513 Gene

Paralogs for LOC645513 Gene

No data available for Paralogs for LOC645513 Gene

Variants for LOC645513 Gene

Sequence variations from dbSNP and Humsavar for LOC645513 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type
rs1000004355 -- 119,476,055(+) TGCTG(-/T)TACCC intron-variant
rs1000051725 -- 119,487,807(+) TAGGT(C/T)CAGGA intron-variant
rs1000238057 -- 119,483,457(+) AGACC(C/T)GTCTT intron-variant
rs1000292107 -- 119,482,936(+) AAAAG(A/T)ATAAA intron-variant
rs10004144 -- 119,463,276(+) GCGAT(A/G)GTTTG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for LOC645513 Gene

Variant ID Type Subtype PubMed ID
nsv967793 CNV duplication 23825009
nsv967792 CNV duplication 23825009
esv2538163 CNV loss 19546169

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for LOC645513 Gene

Disorders for LOC645513 Gene

Relevant External Links for LOC645513

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
LOC645513

No disorders were found for LOC645513 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC645513 Gene

Publications for LOC645513 Gene

No publications were found for LOC645513 Gene.

Products for LOC645513 Gene

Sources for LOC645513 Gene

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