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Aliases for LOC644422 Gene

Aliases for LOC644422 Gene

  • Serine And Arginine Rich Splicing Factor 6 Pseudogene 3
  • AC005822.1 5

External Ids for LOC644422 Gene

Previous GeneCards Identifiers for LOC644422 Gene

  • GC17M016461
  • GC17M016522
  • GC17M016523

Summaries for LOC644422 Gene

GeneCards Summary for LOC644422 Gene

LOC644422 (Serine And Arginine Rich Splicing Factor 6 Pseudogene) is a Pseudogene.

Additional gene information for LOC644422 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC644422 Gene

Genomics for LOC644422 Gene

Regulatory Elements for LOC644422 Gene

Enhancers for LOC644422 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17H016406 1.9 FANTOM5 Ensembl ENCODE dbSUPER 43.3 +210.2 210171 2 HDGF ZNF493 ZFP64 SIN3A FEZF1 YBX1 ZNF121 GLIS2 ZNF207 KLF7 PIGL PPIAP53 NCOR1 ENSG00000266538 TVP23C MPRIP-AS1 LOC644422 ZNF286A ENSG00000264729 MEIS3P1
GH17H016385 1.6 Ensembl ENCODE dbSUPER 24.5 +231.0 231008 2 ATF1 FOXA2 ARID4B SIN3A DMAP1 GLI4 ZNF2 ZNF121 ELK1 ZNF143 PIGL ENSG00000266538 ENSG00000264729 LOC644422 TVP23C PPIAP53 ENSG00000264765 NOS2P4 COTL1P1 ENSG00000265853
GH17H016377 1.7 Ensembl ENCODE dbSUPER 22.8 +237.8 237781 4 ZFP64 DMAP1 YY1 ZNF143 SP3 NFYC PPARGC1A ZNF610 GLIS1 NBN ENSG00000266538 NCOR1 PPIAP53 PIGL TVP23C LOC644422 LRRC75A-AS1 FLCN ACTG1P24 ZNF286A
GH17H017234 1.4 ENCODE dbSUPER 23 -618.9 -618877 3 HDGF FOXA2 MLX ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 FLCN NT5M DRG2 LOC644422 SMCR5 RPL13P12 LRRC75A-AS1 MPRIP-AS1 RAI1 PLD6
GH17H016438 1.4 ENCODE dbSUPER 22.5 +176.5 176463 6 HDGF PKNOX1 MLX ARNT ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 NCOR1 PIGL PPIAP53 ENSG00000266538 LRRC75A-AS1 TVP23C LOC644422 FLCN RPL13P12 ZNF286A
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC644422 on UCSC Golden Path with GeneCards custom track

Promoters for LOC644422 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000091794 80 399

Genomic Location for LOC644422 Gene

Chromosome:
17
Start:
16,616,848 bp from pter
End:
16,617,881 bp from pter
Size:
1,034 bases
Orientation:
Minus strand

Genomic View for LOC644422 Gene

Genes around LOC644422 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC644422 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC644422 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC644422 Gene

Proteins for LOC644422 Gene

Post-translational modifications for LOC644422 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC644422 Gene

Domains & Families for LOC644422 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC644422 Gene

Function for LOC644422 Gene

Phenotypes From GWAS Catalog for LOC644422 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC644422 Gene

Localization for LOC644422 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC644422 Gene

Pathways & Interactions for LOC644422 Gene

SuperPathways for LOC644422 Gene

No Data Available

Interacting Proteins for LOC644422 Gene

Gene Ontology (GO) - Biological Process for LOC644422 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC644422 Gene

Drugs & Compounds for LOC644422 Gene

No Compound Related Data Available

Transcripts for LOC644422 Gene

mRNA/cDNA for LOC644422 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC644422 Gene

No ASD Table

Relevant External Links for LOC644422 Gene

GeneLoc Exon Structure for
LOC644422

Expression for LOC644422 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC644422 Gene

genes like me logo Genes that share expression patterns with LOC644422: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC644422 Gene

Orthologs for LOC644422 Gene

Evolution for LOC644422 Gene

ENSEMBL:
Gene Tree for LOC644422 (if available)
TreeFam:
Gene Tree for LOC644422 (if available)

No data available for Orthologs for LOC644422 Gene

Paralogs for LOC644422 Gene

No data available for Paralogs for LOC644422 Gene

Variants for LOC644422 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC644422 Gene

Disorders for LOC644422 Gene

No disorders were found for LOC644422 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC644422 Gene

Publications for LOC644422 Gene

  1. Proteomic Analysis of the EWS-Fli-1 Interactome Reveals the Role of the Lysosome in EWS-Fli-1 Turnover. (PMID: 24999758) Elzi DJ … Shiio Y (Journal of proteome research 2014) 3 60

Products for LOC644422 Gene

Sources for LOC644422 Gene

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