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Aliases for LOC402213 Gene

Aliases for LOC402213 Gene

  • Peptidylprolyl Isomerase A (Cyclophilin A) Pseudogene 3
  • CTD-2325A15.3 5

External Ids for LOC402213 Gene

Previous GeneCards Identifiers for LOC402213 Gene

  • GC05M042938
  • GC05M042928
  • GC05U901830

Summaries for LOC402213 Gene

GeneCards Summary for LOC402213 Gene

LOC402213 (Peptidylprolyl Isomerase A (Cyclophilin A) Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC402213 Gene

Genomics for LOC402213 Gene

Regulatory Elements for LOC402213 Gene

Enhancers for LOC402213 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05G042807 1.3 Ensembl ENCODE 11 +82.1 82068 7.1 FOXA2 MLX ZFP64 ARID4B DMAP1 YY1 PAF1 SP3 SP5 MXD4 CCDC152 SELENOP LOC402213 GHR LOC648987 ENSG00000272234
GH05G042839 1 Ensembl ENCODE 11.4 +52.4 52374 1.0 ELF3 ZNF792 TAL1 MAX CEBPG ZNF644 RAD21 YY1 IRF9 ZNF316 SELENOP LOC402213 GHR ENSG00000272234
GH05G042850 0.9 ENCODE 11.5 +39.3 39296 5.3 ELF3 FOXA2 FEZF1 RAD21 YY1 RARA TCF12 GATA2 ZNF350 MIXL1 CCDC152 SELENOP LOC402213 GHR ENSG00000272234
GH05G042806 0.6 ENCODE 10.8 +86.4 86446 0.6 PAF1 HNRNPUL1 SUPT20H ZFHX2 ZNF512 HNRNPL EGR2 RBFOX2 CCDC152 SELENOP LOC402213 GHR ENSG00000272234
GH05G042837 0.4 FANTOM5 11 +55.1 55080 0.2 YY1 SELENOP LOC402213 GHR ENSG00000272234
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC402213 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC402213 Gene

Chromosome:
5
Start:
42,892,119 bp from pter
End:
42,892,858 bp from pter
Size:
740 bases
Orientation:
Minus strand

Genomic View for LOC402213 Gene

Genes around LOC402213 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC402213 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC402213 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC402213 Gene

Proteins for LOC402213 Gene

Post-translational modifications for LOC402213 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC402213 Gene

Domains & Families for LOC402213 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC402213 Gene

Function for LOC402213 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC402213 Gene

Localization for LOC402213 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LOC402213 Gene

Pathways & Interactions for LOC402213 Gene

SuperPathways for LOC402213 Gene

No Data Available

Interacting Proteins for LOC402213 Gene

Gene Ontology (GO) - Biological Process for LOC402213 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC402213 Gene

Drugs & Compounds for LOC402213 Gene

No Compound Related Data Available

Transcripts for LOC402213 Gene

mRNA/cDNA for LOC402213 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC402213 Gene

No ASD Table

Relevant External Links for LOC402213 Gene

GeneLoc Exon Structure for
LOC402213

Expression for LOC402213 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC402213 Gene

genes like me logo Genes that share expression patterns with LOC402213: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC402213 Gene

Orthologs for LOC402213 Gene

Evolution for LOC402213 Gene

ENSEMBL:
Gene Tree for LOC402213 (if available)
TreeFam:
Gene Tree for LOC402213 (if available)

No data available for Orthologs for LOC402213 Gene

Paralogs for LOC402213 Gene

No data available for Paralogs for LOC402213 Gene

Variants for LOC402213 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC402213 Gene

Disorders for LOC402213 Gene

No disorders were found for LOC402213 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC402213 Gene

Publications for LOC402213 Gene

No publications were found for LOC402213 Gene.

Products for LOC402213 Gene

Sources for LOC402213 Gene

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