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Aliases for LOC392787 Gene

Aliases for LOC392787 Gene

  • Filamin C Pseudogene 3

External Ids for LOC392787 Gene

Previous GeneCards Identifiers for LOC392787 Gene

  • GC07U900305
  • GC07Mh27566
  • GC07Mh28146
  • GC07M128146
  • GC07M128339
  • GC07M128553

Summaries for LOC392787 Gene

GeneCards Summary for LOC392787 Gene

LOC392787 (Filamin C Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC392787 Gene

Genomics for LOC392787 Gene

Genomic Location for LOC392787 Gene

Start:
128,912,660 bp from pter
End:
128,923,070 bp from pter
Size:
10,411 bases
Orientation:
Minus strand

Genomic View for LOC392787 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for LOC392787 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC392787 Gene

No data available for Regulatory Elements for LOC392787 Gene

Proteins for LOC392787 Gene

  • Protein details for LOC392787 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A4D1J9
    Recommended name:
    Similar to Filamin C (Gamma-filamin) (Filamin 2) (Protein FLNc) (Actin-binding like protein) (ABP-L) (ABP-280-like protein)
    Protein Accession:
    A4D1J9
    Secondary Accessions:

    Protein attributes for LOC392787 Gene

    Size:
    306 amino acids
    Molecular mass:
    32808 Da
    Quaternary structure:
    No Data Available

neXtProt entry for LOC392787 Gene

Proteomics data for LOC392787 Gene at MOPED

Post-translational modifications for LOC392787 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC392787 Gene

Domains for LOC392787 Gene

Protein Domains for LOC392787 Gene

Suggested Antigen Peptide Sequences for LOC392787 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with LOC392787: view

No data available for Gene Families and UniProtKB/Swiss-Prot for LOC392787 Gene

Function for LOC392787 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for LOC392787 Gene

Localization for LOC392787 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for LOC392787 Gene COMPARTMENTS Subcellular localization image for LOC392787 gene
Compartment Confidence
cytosol 3
nucleus 2
extracellular 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for LOC392787 Gene

Pathways for LOC392787 Gene

SuperPathways for LOC392787 Gene

No Data Available

Interacting Proteins for LOC392787 Gene

Selected Interacting proteins: A4D1J9 for LOC392787 Gene via I2D

Symbol External ID(s) Details
OTUD1

Gene Ontology (GO) - Biological Process for LOC392787 Gene

None

No data available for Pathways by source for LOC392787 Gene

Transcripts for LOC392787 Gene

mRNA/cDNA for LOC392787 Gene

(3) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC392787 Gene

No ASD Table

Relevant External Links for LOC392787 Gene

GeneLoc Exon Structure for
LOC392787

Expression for LOC392787 Gene

mRNA expression in normal human tissues for LOC392787 Gene

mRNA differential expression in normal tissues according to GTEx for LOC392787 Gene

This gene is overexpressed in Heart - Left Ventricle (30.8) and Muscle - Skeletal (14.5).

Integrated Proteomics: protein expression from for LOC392787 Gene

genes like me logo Genes that share expressions with LOC392787: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for LOC392787 Gene

Orthologs for LOC392787 Gene

Evolution for LOC392787 Gene

ENSEMBL:
Gene Tree for LOC392787 (if available)
TreeFam:
Gene Tree for LOC392787 (if available)

No data available for Orthologs for LOC392787 Gene

Paralogs for LOC392787 Gene

Selected SIMAP similar genes for LOC392787 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with LOC392787: view

No data available for Paralogs for LOC392787 Gene

Variants for LOC392787 Gene

Relevant External Links for LOC392787 Gene

HapMap Linkage Disequilibrium report
LOC392787

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for LOC392787 Gene

Disorders for LOC392787 Gene

No disorders were found for LOC392787 Gene.

No data available for UniProtKB/Swiss-Prot for LOC392787 Gene

Publications for LOC392787 Gene

  1. Human chromosome 7: DNA sequence and biology. (PMID: 12690205) Scherer S.W. … Tsui L.-C. (Science 2003) 3
  2. DNA sequencing errors in molecular diagnostics of filamin myopathy. (PMID: 20578970) Odgerel Z. … Goldfarb L.G. (Clin. Chem. Lab. Med. 2010) 3

Products for LOC392787 Gene

Sources for LOC392787 Gene

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