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Aliases for LOC392787 Gene

Aliases for LOC392787 Gene

  • Filamin C Pseudogene 3
  • RP11-309L24.6 5

External Ids for LOC392787 Gene

Previous GeneCards Identifiers for LOC392787 Gene

  • GC07U900305
  • GC07Mh27566
  • GC07Mh28146
  • GC07M128146
  • GC07M128339
  • GC07M128553

Summaries for LOC392787 Gene

GeneCards Summary for LOC392787 Gene

LOC392787 (Filamin C Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC392787 Gene

Genomics for LOC392787 Gene

Regulatory Elements for LOC392787 Gene

Enhancers for LOC392787 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07F128826 1.6 FANTOM5 ENCODE 8.8 +90.6 90636 11.9 HDGF PKNOX1 ARNT CREB3L1 ARID4B SIN3A DMAP1 YBX1 ZNF2 YY1 ENSG00000243230 SMO RBM28 CCDC136 LOC392787 ATP6V1F CALU FLNC ENSG00000242902
GH07F128858 1.3 Ensembl ENCODE 8.7 +63.0 63033 3.0 HDGF PKNOX1 ARNT SIN3A YBX1 CBX5 GATA2 KDM4B NCOA1 ZNF623 CCDC136 OPN1SW ENSG00000243230 SMO FLNC RBM28 IMP3P2 ENSG00000241493 FAM71F2 LOC392787
GH07F128902 1.1 Ensembl ENCODE 8.9 +20.2 20170 1.4 BCOR KLF1 JUN KLF17 ZNF175 ZNF316 TRIM24 ZSCAN29 NR2F6 FOS LOC392787 KCP LOC105375497
GH07F128892 0.7 ENCODE 9.6 +29.9 29891 1.4 SMARCE1 ESRRA L3MBTL2 NFRKB CHD1 YY1 POLR2A IKZF1 NBN ZBTB33 ATP6V1F ENSG00000242902 FLNC TSPAN33 OPN1SW AHCYL2 ENSG00000243230 IMP3P2 ENSG00000241493 FAM71F2
GH07F128868 1.1 Ensembl ENCODE 5.4 +53.4 53391 2.4 KLF17 SIN3A RAD21 ZEB1 GLIS2 ZNF366 EGR2 ZNF263 SP3 ZEB2 LOC100130705 ENSG00000230715 LOC392787 METTL2B GC07P128869 GC07P128871
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC392787 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC392787 Gene

128,912,660 bp from pter
128,923,070 bp from pter
10,411 bases
Minus strand

Genomic View for LOC392787 Gene

Genes around LOC392787 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC392787 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC392787 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC392787 Gene

Proteins for LOC392787 Gene

  • Protein details for LOC392787 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    Recommended name:
    Similar to Filamin C (Gamma-filamin) (Filamin 2) (Protein FLNc) (Actin-binding like protein) (ABP-L) (ABP-280-like protein)
    Protein Accession:

    Protein attributes for LOC392787 Gene

    306 amino acids
    Molecular mass:
    32808 Da
    Quaternary structure:
    No Data Available

neXtProt entry for LOC392787 Gene

Post-translational modifications for LOC392787 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC392787 Gene

Domains & Families for LOC392787 Gene

Protein Domains for LOC392787 Gene

Suggested Antigen Peptide Sequences for LOC392787 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with LOC392787: view

No data available for Gene Families and UniProtKB/Swiss-Prot for LOC392787 Gene

Function for LOC392787 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC392787 Gene

Localization for LOC392787 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LOC392787 Gene

Pathways & Interactions for LOC392787 Gene

SuperPathways for LOC392787 Gene

No Data Available

Interacting Proteins for LOC392787 Gene

Gene Ontology (GO) - Biological Process for LOC392787 Gene


No data available for Pathways by source and SIGNOR curated interactions for LOC392787 Gene

Transcripts for LOC392787 Gene

mRNA/cDNA for LOC392787 Gene

(3) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC392787 Gene

No ASD Table

Relevant External Links for LOC392787 Gene

GeneLoc Exon Structure for

Expression for LOC392787 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC392787 Gene

mRNA differential expression in normal tissues according to GTEx for LOC392787 Gene

This gene is overexpressed in Heart - Left Ventricle (x30.8) and Muscle - Skeletal (x14.5).

Protein differential expression in normal tissues from HIPED for LOC392787 Gene

This gene is overexpressed in Heart (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for LOC392787 Gene

Protein tissue co-expression partners for LOC392787 Gene

genes like me logo Genes that share expression patterns with LOC392787: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for LOC392787 Gene

Orthologs for LOC392787 Gene

Evolution for LOC392787 Gene

Gene Tree for LOC392787 (if available)
Gene Tree for LOC392787 (if available)

No data available for Orthologs for LOC392787 Gene

Paralogs for LOC392787 Gene

(2) SIMAP similar genes for LOC392787 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with LOC392787: view

No data available for Paralogs for LOC392787 Gene

Variants for LOC392787 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC392787 Gene

Disorders for LOC392787 Gene

No disorders were found for LOC392787 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC392787 Gene

Publications for LOC392787 Gene

  1. DNA sequencing errors in molecular diagnostics of filamin myopathy. (PMID: 20578970) Odgerel Z. … Goldfarb L.G. (Clin. Chem. Lab. Med. 2010) 3 64
  2. Human chromosome 7: DNA sequence and biology. (PMID: 12690205) Scherer S.W. … Tsui L.-C. (Science 2003) 3 64

Products for LOC392787 Gene

Sources for LOC392787 Gene

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