Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC286359 Gene

Subcategory (RNA class) for LOC286359 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC286359 Gene

  • Uncharacterized LOC286359 3
  • RP11-23J9.3 5

External Ids for LOC286359 Gene

Previous GeneCards Identifiers for LOC286359 Gene

  • GC09M091896
  • GC09M093610
  • GC09M095532
  • GC09M097232
  • GC09U900771
  • GC09M099195
  • GC09M100149

Summaries for LOC286359 Gene

GeneCards Summary for LOC286359 Gene

LOC286359 (Uncharacterized LOC286359) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC286359 Gene

Genomics for LOC286359 Gene

Regulatory Elements for LOC286359 Gene

Enhancers for LOC286359 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09G097400 1.1 Ensembl ENCODE 0.7 -2.5 -2504 0.4 ELF3 RB1 MLX WRNIP1 ARID4B ZNF48 RAD21 RARA SCRT2 ZNF143 ENSG00000203279 LOC286359 TDRD7
GH09G097399 0.9 Ensembl 0.7 -2.8 -2810 0.2 ELF3 RB1 MLX WRNIP1 ARID4B ZNF48 RAD21 RARA ZNF143 FOS ENSG00000203279 LOC286359 TDRD7
GH09G097404 1.2 ENCODE dbSUPER 0.4 -9.4 -9378 3.3 HNRNPUL1 PKNOX1 FOXA2 ATF1 MLX ARID4B DMAP1 YY1 TCF12 ZHX2 ENSG00000203279 FAM220CP VN1R51P LOC286359 TDRD7
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC286359 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC286359 Gene

Chromosome:
9
Start:
97,386,240 bp from pter
End:
97,396,691 bp from pter
Size:
10,452 bases
Orientation:
Minus strand

Genomic View for LOC286359 Gene

Genes around LOC286359 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC286359 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC286359 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC286359 Gene

Proteins for LOC286359 Gene

Post-translational modifications for LOC286359 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC286359 Gene

Domains & Families for LOC286359 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC286359 Gene

Function for LOC286359 Gene

Phenotypes for LOC286359 Gene

genes like me logo Genes that share phenotypes with LOC286359: view

Animal Model Products

Inhibitory RNA Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC286359 Gene

Localization for LOC286359 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LOC286359 Gene

Pathways & Interactions for LOC286359 Gene

SuperPathways for LOC286359 Gene

No Data Available

Interacting Proteins for LOC286359 Gene

Gene Ontology (GO) - Biological Process for LOC286359 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC286359 Gene

Drugs & Compounds for LOC286359 Gene

No Compound Related Data Available

Transcripts for LOC286359 Gene

mRNA/cDNA for LOC286359 Gene

(1) REFSEQ mRNAs :
(7) Additional mRNA sequences :
(6) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for LOC286359 Gene

Uncharacterized LOC286359:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for LOC286359 Gene

No ASD Table

Relevant External Links for LOC286359 Gene

GeneLoc Exon Structure for
LOC286359

Expression for LOC286359 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC286359 Gene

mRNA differential expression in normal tissues according to GTEx for LOC286359 Gene

This gene is overexpressed in Testis (x48.1).

SOURCE GeneReport for Unigene cluster for LOC286359 Gene:

Hs.132262
genes like me logo Genes that share expression patterns with LOC286359: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC286359 Gene

Orthologs for LOC286359 Gene

Evolution for LOC286359 Gene

ENSEMBL:
Gene Tree for LOC286359 (if available)
TreeFam:
Gene Tree for LOC286359 (if available)

No data available for Orthologs for LOC286359 Gene

Paralogs for LOC286359 Gene

No data available for Paralogs for LOC286359 Gene

Variants for LOC286359 Gene

Sequence variations from dbSNP and Humsavar for LOC286359 Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type
rs1001051729 -- 97,394,176(+) CTTCC(A/G)CCATG intron-variant
rs1001400850 -- 97,393,916(+) TCCCC(A/G)CCCCA intron-variant
rs1001725632 -- 97,397,175(+) CAGCA(C/T)GGACT nc-transcript-variant, upstream-variant-2KB
rs1001769393 -- 97,390,403(+) AGGTA(C/T)TCTGC downstream-variant-500B
rs1002368839 -- 97,396,588(+) CCGGG(A/C)TTTCC nc-transcript-variant, upstream-variant-2KB

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC286359 Gene

Disorders for LOC286359 Gene

Relevant External Links for LOC286359

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
LOC286359

No disorders were found for LOC286359 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC286359 Gene

Publications for LOC286359 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64
  3. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3 64

Products for LOC286359 Gene

Sources for LOC286359 Gene

Content
Loading form....