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Aliases for LOC283387 Gene

Aliases for LOC283387 Gene

  • Uncharacterized LOC283387 3
  • RP11-620J15.2 5

External Ids for LOC283387 Gene

Previous GeneCards Identifiers for LOC283387 Gene

  • GC12M058406
  • GC12M057981
  • GC12U900213

Summaries for LOC283387 Gene

GeneCards Summary for LOC283387 Gene

LOC283387 (Uncharacterized LOC283387) is an Uncategorized gene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC283387 Gene

Genomics for LOC283387 Gene

Regulatory Elements for LOC283387 Gene

Enhancers for LOC283387 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12G057109 1.5 ENCODE dbSUPER 56.9 +785.2 785229 3.8 CREB3L1 FEZF1 DMAP1 YY1 ZNF416 ZNF143 ZNF548 ZNF263 SP3 MCM3 NEMP1 SMARCC2 ENSG00000257740 ANKRD52 BAZ2A NAB2 ENSG00000224713 CTDSP2 LOC283387 RN7SL809P
GH12G057454 1.6 Ensembl ENCODE dbSUPER 19.6 +440.7 440712 3.5 HDGF PKNOX1 MLX CREB3L1 ARNT ARID4B DMAP1 ZNF2 YY1 ZNF766 NEMP1 ENSG00000224713 LOC283387 BAZ2A RN7SL809P RNU6-343P CTDSP2 RBMS2 TSPAN31 ARHGAP9
GH12G057126 2.1 FANTOM5 Ensembl ENCODE dbSUPER 13.3 +763.0 763045 13.9 CREB3L1 AGO1 DMAP1 YBX1 FEZF1 YY1 SLC30A9 ZNF143 SP3 NFYC ENSG00000257740 ANKRD52 NAB2 ENSG00000258199 LOC283387 NEMP1 ZBTB39 ARHGEF25 LRP1 ENSG00000269903
GH12G057245 1.2 ENCODE dbSUPER 21.2 +651.3 651250 0.2 PKNOX1 ZNF2 YY2 REST ZNF662 ZNF491 ZNF518A ZNF610 GLIS1 ZNF624 ENSG00000257740 ANKRD52 LOC283387 NAB2 TSPAN31 NXPH4 ZBTB39 NEMP1 ARHGEF25 B4GALNT1
GH12G057886 1.9 FANTOM5 Ensembl ENCODE dbSUPER 9.5 +3.2 3187 13.7 HDGF PKNOX1 FOXA2 ZNF2 ZNF143 FOS SP3 JUNB REST TBX21 ATP23 EEF1AKMT3 CTDSP2 TSFM MIR26A2 AVIL RNU6-1083P MARCH9 LOC283387 GLI1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC283387 on UCSC Golden Path with GeneCards custom track

Promoters for LOC283387 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000052725 -318 401 FOXA2 ZNF76 KLF17 ZNF2 RAD21 GLIS2 SP3 ZNF398 NR2F2 ZFP69B

Genomic Location for LOC283387 Gene

Chromosome:
12
Start:
57,869,173 bp from pter
End:
57,896,482 bp from pter
Size:
27,310 bases
Orientation:
Minus strand

Genomic View for LOC283387 Gene

Genes around LOC283387 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC283387 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC283387 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC283387 Gene

Proteins for LOC283387 Gene

Post-translational modifications for LOC283387 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC283387 Gene

Domains & Families for LOC283387 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC283387 Gene

Function for LOC283387 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC283387 Gene

Localization for LOC283387 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LOC283387 Gene

Pathways & Interactions for LOC283387 Gene

SuperPathways for LOC283387 Gene

No Data Available

Interacting Proteins for LOC283387 Gene

Gene Ontology (GO) - Biological Process for LOC283387 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC283387 Gene

Drugs & Compounds for LOC283387 Gene

No Compound Related Data Available

Transcripts for LOC283387 Gene

mRNA/cDNA for LOC283387 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC283387 Gene

No ASD Table

Relevant External Links for LOC283387 Gene

GeneLoc Exon Structure for
LOC283387

Expression for LOC283387 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC283387 Gene

SOURCE GeneReport for Unigene cluster for LOC283387 Gene:

Hs.727244
genes like me logo Genes that share expression patterns with LOC283387: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC283387 Gene

Orthologs for LOC283387 Gene

Evolution for LOC283387 Gene

ENSEMBL:
Gene Tree for LOC283387 (if available)
TreeFam:
Gene Tree for LOC283387 (if available)

No data available for Orthologs for LOC283387 Gene

Paralogs for LOC283387 Gene

No data available for Paralogs for LOC283387 Gene

Variants for LOC283387 Gene

Sequence variations from dbSNP and Humsavar for LOC283387 Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type
rs1000029082 -- 57,892,419(+) TGGGC(A/G)TGGCT intron-variant, upstream-variant-2KB
rs1000037792 -- 57,878,760(+) CGGAT(A/C)ACGAG intron-variant
rs1000102825 -- 57,877,353(+) ACACT(A/C)AAAAG intron-variant
rs1000260528 -- 57,872,448(+) TCTAG(A/G)TGTCT intron-variant, upstream-variant-2KB
rs1000350518 -- 57,881,734(+) TCAGT(A/G)CCACA intron-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC283387 Gene

Disorders for LOC283387 Gene

Relevant External Links for LOC283387

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
LOC283387

No disorders were found for LOC283387 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC283387 Gene

Publications for LOC283387 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for LOC283387 Gene

Sources for LOC283387 Gene

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