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Aliases for LOC105378863 Gene

Subcategory (RNA class) for LOC105378863 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105378863 Gene

  • Uncharacterized LOC105378863 3

External Ids for LOC105378863 Gene

Previous GeneCards Identifiers for LOC105378863 Gene

  • GC01U904481

Summaries for LOC105378863 Gene

GeneCards Summary for LOC105378863 Gene

LOC105378863 (Uncharacterized LOC105378863) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105378863 Gene

Genomics for LOC105378863 Gene

Regulatory Elements for LOC105378863 Gene

Enhancers for LOC105378863 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G095041 1.5 FANTOM5 Ensembl ENCODE 0.4 +13.9 13853 2.5 HDGF FOXA2 SIN3A ARID4B FEZF1 YBX1 ZNF2 SLC30A9 ZNF143 DEK SLC44A3-AS1 SLC44A3 TMEM56 ENSG00000231992 ENSG00000228852 LOC102723661 LOC105378863 LOC101928098
GH01G095013 1.4 Ensembl ENCODE dbSUPER 0.4 -14.8 -14780 1.2 ELF3 FOXA2 MLX ARID4B RAD21 RARA SLC30A9 GATA4 CREM MIXL1 LOC101928098 ALG14 ENSG00000228852 GC01M094924 GC01M094925 LOC105378863
GH01G095020 1.1 Ensembl ENCODE dbSUPER 0.4 -5.9 -5932 3.9 JUN HLF RAD21 ZFHX2 JUND ZFP3 SCRT2 FOS PRDM1 EGR2 CNN3 LOC729970 ALG14 RWDD3 ENSG00000228852 LOC105378863 GC01M094925 GC01M094924
GH01G095039 0.8 ENCODE 0.4 +11.2 11152 1.3 TAL1 ZFP64 ZNF266 ZNF101 ZNF697 TCF12 GATA3 EGR1 ZNF19 NR2F6 SLC44A3-AS1 SLC44A3 TMEM56 ENSG00000231992 RWDD3 LOC102723661 LOC105378863 LOC101928098
GH01G095033 0.7 ENCODE 0.4 +6.4 6385 2.4 ZNF639 ZNF174 ZBTB21 ZEB2 ZNF394 ATF2 ZSCAN21 JUND PRDM6 ZNF366 LOC101928098 SLC44A3-AS1 SLC44A3 RWDD3 LOC729970 LOC105378863
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105378863 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC105378863 Gene

Chromosome:
1
Start:
95,028,780 bp from pter
End:
95,031,531 bp from pter
Size:
2,752 bases
Orientation:
Plus strand

Genomic View for LOC105378863 Gene

Genes around LOC105378863 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105378863 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105378863 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105378863 Gene

Proteins for LOC105378863 Gene

Post-translational modifications for LOC105378863 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105378863 Gene

Domains & Families for LOC105378863 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105378863 Gene

Function for LOC105378863 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105378863 Gene

Localization for LOC105378863 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LOC105378863 Gene

Pathways & Interactions for LOC105378863 Gene

SuperPathways for LOC105378863 Gene

No Data Available

Interacting Proteins for LOC105378863 Gene

Gene Ontology (GO) - Biological Process for LOC105378863 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105378863 Gene

Drugs & Compounds for LOC105378863 Gene

No Compound Related Data Available

Transcripts for LOC105378863 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105378863 Gene

No ASD Table

Relevant External Links for LOC105378863 Gene

GeneLoc Exon Structure for
LOC105378863

No data available for mRNA/cDNA for LOC105378863 Gene

Expression for LOC105378863 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105378863 Gene

Orthologs for LOC105378863 Gene

No data available for Orthologs and Evolution for LOC105378863 Gene

Paralogs for LOC105378863 Gene

No data available for Paralogs for LOC105378863 Gene

Variants for LOC105378863 Gene

Sequence variations from dbSNP and Humsavar for LOC105378863 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs1002421034 -- 95,031,658(+) CTCCC(A/C)TCTCC intron-variant, downstream-variant-500B
rs1002438189 -- 95,031,632(+) ACTAG(A/C)CTTTC intron-variant, downstream-variant-500B
rs1003034075 -- 95,030,141(+) TTATA(C/T)ACCAC intron-variant, upstream-variant-2KB
rs1003097946 -- 95,030,771(+) TGGAC(A/G)TGGAA intron-variant, nc-transcript-variant
rs1003558057 -- 95,030,567(+) TTAAG(A/G)CTGTG intron-variant, nc-transcript-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105378863 Gene

Disorders for LOC105378863 Gene

No disorders were found for LOC105378863 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105378863 Gene

Publications for LOC105378863 Gene

No publications were found for LOC105378863 Gene.

Products for LOC105378863 Gene

Sources for LOC105378863 Gene

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