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Aliases for LOC105378351 Gene

Subcategory (RNA class) for LOC105378351 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105378351 Gene

  • Uncharacterized LOC105378351 3

External Ids for LOC105378351 Gene

Previous GeneCards Identifiers for LOC105378351 Gene

  • GC10U902105

Summaries for LOC105378351 Gene

GeneCards Summary for LOC105378351 Gene

LOC105378351 (Uncharacterized LOC105378351) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105378351 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105378351 Gene

Genomics for LOC105378351 Gene

Regulatory Elements for LOC105378351 Gene

Enhancers for LOC105378351 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10H070984 0.7 ENCODE 0.4 +19.5 19490 2 KLF1 KLF17 MAX ZNF766 GATA3 ELK1 SCRT2 ZNF584 ZNF639 SCRT1 SLC29A3 LOC105378350 LOC105378351
GH10H071025 0.6 ENCODE 0.4 -20.0 -19995 0 SCRT1 RFX1 SCRT2 ZNF133 CEBPB FOS BMI1 UNC5B LOC105378351 PIR52978
GH10H070981 0.6 ENCODE 0.3 +23.3 23295 1 IRF2 ZNF687 IKZF1 BHLHE40 USF2 RUNX3 SPI1 LOC105378350 LOC105378351
GH10H071068 0.7 Ensembl ENCODE 0.2 -63.2 -63237 0 ZIC2 ZFX LOC105378351 PIR52978
GH10H071036 0.4 ENCODE 0.3 -30.6 -30635 0 ZNF341 SCRT2 UNC5B PCBD1 LOC105378351 PIR52978
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105378351 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC105378351 Gene

Chromosome:
10
Start:
71,003,507 bp from pter
End:
71,005,764 bp from pter
Size:
2,258 bases
Orientation:
Minus strand

Genomic View for LOC105378351 Gene

Genes around LOC105378351 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105378351 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105378351 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105378351 Gene

Proteins for LOC105378351 Gene

Post-translational modifications for LOC105378351 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105378351 Gene

Domains & Families for LOC105378351 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105378351 Gene

Function for LOC105378351 Gene

Phenotypes From GWAS Catalog for LOC105378351 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105378351 Gene

Localization for LOC105378351 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105378351 Gene

Pathways & Interactions for LOC105378351 Gene

SuperPathways for LOC105378351 Gene

No Data Available

Interacting Proteins for LOC105378351 Gene

Gene Ontology (GO) - Biological Process for LOC105378351 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105378351 Gene

Drugs & Compounds for LOC105378351 Gene

No Compound Related Data Available

Transcripts for LOC105378351 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105378351 Gene

No ASD Table

Relevant External Links for LOC105378351 Gene

GeneLoc Exon Structure for
LOC105378351

No data available for mRNA/cDNA for LOC105378351 Gene

Expression for LOC105378351 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105378351 Gene

Orthologs for LOC105378351 Gene

No data available for Orthologs and Evolution for LOC105378351 Gene

Paralogs for LOC105378351 Gene

No data available for Paralogs for LOC105378351 Gene

Variants for LOC105378351 Gene

Sequence variations from dbSNP and Humsavar for LOC105378351 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type
rs1000354622 -- 71,003,802(+) GGCAA(A/G)GATCA intron-variant, nc-transcript-variant
rs1002284723 -- 71,004,051(+) AGTTA(A/G)TGATC intron-variant, nc-transcript-variant
rs1002301747 -- 71,007,132(+) CTGCT(-/C)TAGAA upstream-variant-2KB
rs1002317605 -- 71,004,193(+) TCCAG(A/G)TCCCT intron-variant, nc-transcript-variant
rs1002698380 -- 71,007,012(+) CCATA(A/G)CATTG upstream-variant-2KB

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105378351 Gene

Disorders for LOC105378351 Gene

No disorders were found for LOC105378351 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105378351 Gene

Publications for LOC105378351 Gene

No publications were found for LOC105378351 Gene.

Products for LOC105378351 Gene

Sources for LOC105378351 Gene

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