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Aliases for LOC105378349 Gene

Subcategory (RNA class) for LOC105378349 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105378349 Gene

  • Uncharacterized LOC105378349 3
  • AC073176.1 5

External Ids for LOC105378349 Gene

Previous GeneCards Identifiers for LOC105378349 Gene

  • GC10U902354

Summaries for LOC105378349 Gene

GeneCards Summary for LOC105378349 Gene

LOC105378349 (Uncharacterized LOC105378349) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105378349 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105378349 Gene

Genomics for LOC105378349 Gene

Regulatory Elements for LOC105378349 Gene

Enhancers for LOC105378349 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10H070458 1.1 Ensembl ENCODE 14.6 -480.2 -480197 1 HDGF KLF17 ZNF2 GLIS2 EGR1 FOS EGR2 ZNF680 CEBPB ZEB2 LOC105378349 MTCO1P23 MTND1P20 MTND2P15 NPFFR1 PALD1 YY1P1
GH10H071631 0.8 ENCODE 14.6 +692.7 692650 0 BCOR CTCF KLF17 FEZF1 NFXL1 ZIC2 ZNF121 CTBP1 ZBTB48 PATZ1 CDH23-AS1 LOC105378349 SLC29A3 GC10P071695 LOC105378355
GH10H070941 0.5 ENCODE 0.7 +2.3 2269 0 NFIC NFIB NRF1 MYNN UNC5B LOC105378349 LOC105378350
GH10H070950 0.4 ENCODE 0.4 +12.6 12596 2 EBF1 REST LOC105378349 LOC105378350
GH10H070970 0.2 ENCODE 0.3 +32.0 31996 0 PCBD1 UNC5B LOC105378350 LOC105378349
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105378349 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC105378349 Gene

Chromosome:
10
Start:
70,939,053 bp from pter
End:
70,955,641 bp from pter
Size:
16,589 bases
Orientation:
Plus strand

Genomic View for LOC105378349 Gene

Genes around LOC105378349 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105378349 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105378349 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105378349 Gene

Proteins for LOC105378349 Gene

Post-translational modifications for LOC105378349 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105378349 Gene

Domains & Families for LOC105378349 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105378349 Gene

Function for LOC105378349 Gene

Phenotypes From GWAS Catalog for LOC105378349 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105378349 Gene

Localization for LOC105378349 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105378349 Gene

Pathways & Interactions for LOC105378349 Gene

SuperPathways for LOC105378349 Gene

No Data Available

Interacting Proteins for LOC105378349 Gene

Gene Ontology (GO) - Biological Process for LOC105378349 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105378349 Gene

Drugs & Compounds for LOC105378349 Gene

No Compound Related Data Available

Transcripts for LOC105378349 Gene

mRNA/cDNA for LOC105378349 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105378349 Gene

No ASD Table

Relevant External Links for LOC105378349 Gene

GeneLoc Exon Structure for
LOC105378349

Expression for LOC105378349 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105378349 Gene

Orthologs for LOC105378349 Gene

Evolution for LOC105378349 Gene

ENSEMBL:
Gene Tree for LOC105378349 (if available)
TreeFam:
Gene Tree for LOC105378349 (if available)

No data available for Orthologs for LOC105378349 Gene

Paralogs for LOC105378349 Gene

No data available for Paralogs for LOC105378349 Gene

Variants for LOC105378349 Gene

Sequence variations from dbSNP and Humsavar for LOC105378349 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type
rs1000024142 -- 70,942,726(+) ATGAG(A/G)CAGCA intron-variant
rs1000085339 -- 70,937,059(+) TGCAA(A/G)GCTTT upstream-variant-2KB
rs1000117420 -- 70,953,845(+) AATAA(A/G)TATTT intron-variant
rs1001034128 -- 70,950,312(+) TTTGA(A/G)TGGTG intron-variant
rs1001101128 -- 70,952,269(+) TGTTT(A/G)CATTT intron-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105378349 Gene

Disorders for LOC105378349 Gene

Relevant External Links for LOC105378349

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
LOC105378349

No disorders were found for LOC105378349 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC105378349 Gene

Publications for LOC105378349 Gene

No publications were found for LOC105378349 Gene.

Products for LOC105378349 Gene

Sources for LOC105378349 Gene

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