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Aliases for LOC105377504 Gene

Subcategory (RNA class) for LOC105377504 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105377504 Gene

  • Uncharacterized LOC105377504 3

External Ids for LOC105377504 Gene

Previous GeneCards Identifiers for LOC105377504 Gene

  • GC04U901954

Summaries for LOC105377504 Gene

GeneCards Summary for LOC105377504 Gene

LOC105377504 (Uncharacterized LOC105377504) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105377504 Gene

Genomics for LOC105377504 Gene

Regulatory Elements for LOC105377504 Gene

Enhancers for LOC105377504 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04G155525 0.7 Ensembl ENCODE 0.7 -4.0 -4004 1.4 PRDM1 NR2F2 GUCY1B3 GUCY1A3 LOC105377504
GH04G155522 0.4 ENCODE 0.7 +0.3 306 0.2 BHLHE40 GUCY1A3 LOC105377504 LOC105377505
GH04G155582 1.1 Ensembl ENCODE 0.2 -60.6 -60575 1.1 INSM2 FEZF1 ZNF2 ZEB1 GATA2 ZNF366 ZSCAN5C EGR2 OVOL3 TSHZ1 LOC105377504 GUCY1A3
GH04G155543 0.5 ENCODE 0.3 -20.7 -20726 0.5 GATA2 JUN FOS GUCY1B3 LOC105377504 GUCY1A3
GH04G155566 0.4 ENCODE 0.3 -43.7 -43734 0.7 ZNF680 LOC105377504 GUCY1A3
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105377504 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC105377504 Gene

Chromosome:
4
Start:
155,521,550 bp from pter
End:
155,522,709 bp from pter
Size:
1,160 bases
Orientation:
Minus strand

Genomic View for LOC105377504 Gene

Genes around LOC105377504 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105377504 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105377504 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105377504 Gene

Proteins for LOC105377504 Gene

Post-translational modifications for LOC105377504 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105377504 Gene

Domains & Families for LOC105377504 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105377504 Gene

Function for LOC105377504 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105377504 Gene

Localization for LOC105377504 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LOC105377504 Gene

Pathways & Interactions for LOC105377504 Gene

SuperPathways for LOC105377504 Gene

No Data Available

Interacting Proteins for LOC105377504 Gene

Gene Ontology (GO) - Biological Process for LOC105377504 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105377504 Gene

Drugs & Compounds for LOC105377504 Gene

No Compound Related Data Available

Transcripts for LOC105377504 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105377504 Gene

No ASD Table

Relevant External Links for LOC105377504 Gene

GeneLoc Exon Structure for
LOC105377504

No data available for mRNA/cDNA for LOC105377504 Gene

Expression for LOC105377504 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105377504 Gene

Orthologs for LOC105377504 Gene

No data available for Orthologs and Evolution for LOC105377504 Gene

Paralogs for LOC105377504 Gene

No data available for Paralogs for LOC105377504 Gene

Variants for LOC105377504 Gene

Sequence variations from dbSNP and Humsavar for LOC105377504 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type
rs1000223122 -- 155,523,823(+) GAAAC(-/T)GCTTT nc-transcript-variant
rs1000333540 -- 155,524,476(+) CTGAC(A/C)TCAGG upstream-variant-2KB
rs1002142492 -- 155,524,494(+) CCTGC(C/T)TCGGC upstream-variant-2KB
rs10024691 -- 155,525,168(+) AAAAG(G/T)TCTCC upstream-variant-2KB
rs1003145473 -- 155,525,565(+) GGAAG(C/T)CAAGT upstream-variant-2KB

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105377504 Gene

Disorders for LOC105377504 Gene

No disorders were found for LOC105377504 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105377504 Gene

Publications for LOC105377504 Gene

No publications were found for LOC105377504 Gene.

Products for LOC105377504 Gene

Sources for LOC105377504 Gene

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