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Aliases for LOC105376473 Gene

Subcategory (RNA class) for LOC105376473 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105376473 Gene

  • Uncharacterized LOC105376473 3

External Ids for LOC105376473 Gene

Previous GeneCards Identifiers for LOC105376473 Gene

  • GC10U901997
  • GC10M029381
  • GC10M029387
  • GC10M029542
  • GC10M029546
  • GC10M029673

Summaries for LOC105376473 Gene

GeneCards Summary for LOC105376473 Gene

LOC105376473 (Uncharacterized LOC105376473) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105376473 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105376473 Gene

Genomics for LOC105376473 Gene

Regulatory Elements for LOC105376473 Gene

Enhancers for LOC105376473 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10H029370 0.8 Ensembl 0.7 +4.4 4436 0 PKNOX1 INSM2 KLF17 FEZF1 ZIC2 GATA3 ZNF366 ZBTB48 ZSCAN5C PATZ1 SVIL-AS1 LOC105376473 LYZL1
GH10H029358 0.6 ENCODE 0.4 +16.7 16721 1 CTBP1 ZNF316 MAFG NFE2 DPF2 MAFK NFE2L2 LOC105376473 LYZL1
GH10H029353 0.8 ENCODE 0.3 +21.0 20979 1 ELF3 SOX13 SAP130 DMAP1 ZNF644 THRB RARA TEAD3 NR2F6 GATAD2A LOC105376473 LYZL1
GH10H029344 0.8 Ensembl ENCODE 0.3 +30.4 30449 0 EGR1 JUN EBF1 REST EGR2 LOC105376473 LYZL1
GH10H029317 1.2 Ensembl ENCODE 0.2 +56.1 56051 2 PKNOX1 FOXA2 ZFP64 ARID4B SIN3A FEZF1 YY1 TCF12 SP3 SP5 WAC LYZL1 CKS1BP2 LOC105376473
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105376473 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC105376473 Gene

Chromosome:
10
Start:
29,373,026 bp from pter
End:
29,374,919 bp from pter
Size:
1,894 bases
Orientation:
Minus strand

Genomic View for LOC105376473 Gene

Genes around LOC105376473 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105376473 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105376473 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105376473 Gene

Proteins for LOC105376473 Gene

Post-translational modifications for LOC105376473 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105376473 Gene

Domains & Families for LOC105376473 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105376473 Gene

Function for LOC105376473 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105376473 Gene

Localization for LOC105376473 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105376473 Gene

Pathways & Interactions for LOC105376473 Gene

SuperPathways for LOC105376473 Gene

No Data Available

Interacting Proteins for LOC105376473 Gene

Gene Ontology (GO) - Biological Process for LOC105376473 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105376473 Gene

Drugs & Compounds for LOC105376473 Gene

No Compound Related Data Available

Transcripts for LOC105376473 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105376473 Gene

No ASD Table

Relevant External Links for LOC105376473 Gene

GeneLoc Exon Structure for
LOC105376473

No data available for mRNA/cDNA for LOC105376473 Gene

Expression for LOC105376473 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105376473 Gene

Orthologs for LOC105376473 Gene

No data available for Orthologs and Evolution for LOC105376473 Gene

Paralogs for LOC105376473 Gene

No data available for Paralogs for LOC105376473 Gene

Variants for LOC105376473 Gene

Sequence variations from dbSNP and Humsavar for LOC105376473 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type
rs1000574445 -- 29,372,844(+) AAAGC(C/T)AAAAT intron-variant, downstream-variant-500B
rs1000765316 -- 29,373,457(+) TAACA(A/G)GACCC intron-variant
rs1001197598 -- 29,373,140(+) ACAGC(A/C/G)ACCTC intron-variant, nc-transcript-variant
rs1001296867 -- 29,373,960(+) AAAGT(C/G)TCACT intron-variant
rs1001764894 -- 29,375,764(+) TCATT(A/C)ATTCA upstream-variant-2KB

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105376473 Gene

Disorders for LOC105376473 Gene

No disorders were found for LOC105376473 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105376473 Gene

Publications for LOC105376473 Gene

No publications were found for LOC105376473 Gene.

Products for LOC105376473 Gene

Sources for LOC105376473 Gene

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